Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO591G0416 Papaver somniferum HOM05D005498 ORTHO05D006719 2.5e-101 372.1 186 100.0
PSO017G5587 Papaver somniferum HOM05D005498 ORTHO05D006719 1.6e-23 113.6 71 87.3
PSO478G3668 Papaver somniferum HOM05D005498 ORTHO05D006719 4.0e-22 109.0 71 84.5
TAR622G0889 Trochodendron aralioides HOM05D005498 ORTHO05D006719 1.1e-16 90.9 71 71.8
Haze_12543 Corylus avellana HOM05D005498 ORTHO05D006719 1.9e-16 90.1 71 70.4
Actinidia36852 Actinidia chinensis HOM05D005498 ORTHO05D006719 4.3e-16 89.0 71 67.6
Eucgr.J01697 Eucalyptus grandis HOM05D005498 ORTHO05D006719 4.3e-16 89.0 71 71.8
Nitab4.5_0000976g0330 Nicotiana tabacum HOM05D005498 ORTHO05D006719 4.3e-16 89.0 73 65.8
Potri.003G158800 Populus trichocarpa HOM05D005498 ORTHO05D006719 4.3e-16 89.0 71 67.6
Sabra01G0050700 Salix brachista HOM05D005498 ORTHO05D006719 4.3e-16 89.0 71 67.6
Nn3g16174 Nelumbo nucifera HOM05D005498 ORTHO05D006719 7.3e-16 88.2 71 69.0
Sabra03G0115200 Salix brachista HOM05D005498 ORTHO05D006719 7.3e-16 88.2 71 67.6
Gohir.A10G154800 Gossypium hirsutum HOM05D005498 ORTHO05D006719 9.5e-16 87.8 71 69.0
Gohir.D10G111100 Gossypium hirsutum HOM05D005498 ORTHO05D006719 9.5e-16 87.8 71 69.0
Oeu027824.1 Olea europaea HOM05D005498 ORTHO05D006719 9.5e-16 87.8 71 67.6
MBI07_g11055_MAGBIO Magnolia biondii HOM05D005498 ORTHO05D006719 1.2e-15 87.4 73 67.1
Manes.08G098200 Manihot esculenta HOM05D005498 ORTHO05D006719 1.2e-15 87.4 71 67.6
Nitab4.5_0007669g0040 Nicotiana tabacum HOM05D005498 ORTHO05D006719 1.2e-15 87.4 73 65.8
Potri.001G072100 Populus trichocarpa HOM05D005498 ORTHO05D006719 1.2e-15 87.4 71 66.2
Dinv13692 Davidia involucrata HOM05D005498 ORTHO05D006719 1.6e-15 87.0 71 67.6
Actinidia08921 Actinidia chinensis HOM05D005498 ORTHO05D006719 3.6e-15 85.9 71 64.8
CSS0015612 Camellia sinensis var. sinensis HOM05D005498 ORTHO05D006719 4.7e-15 85.5 71 66.2
Gorai.011G122500 Gossypium raimondii HOM05D005498 ORTHO05D006719 4.7e-15 85.5 71 67.6
Thecc.01G236700 Theobroma cacao HOM05D005498 ORTHO05D006719 6.1e-15 85.1 71 66.2
Migut.I00649 Erythranthe guttata HOM05D005498 ORTHO05D006719 1.4e-14 84.0 73 58.9
Peaxi162Scf00314g00830 Petunia axillaris HOM05D005498 ORTHO05D006719 1.8e-14 83.6 73 64.4
SGA_v2.0_scaffold37G14665 Striga asiatica HOM05D005498 ORTHO05D006719 1.8e-14 83.6 73 58.9
SGA_v2.0_scaffold5G02818 Striga asiatica HOM05D005498 ORTHO05D006719 1.8e-14 83.6 73 60.3
Duzib264G0012 Durio zibethinus HOM05D005498 ORTHO05D006719 3.1e-14 82.8 71 66.2
Lj9A489T67 Lonicera japonica HOM05D005498 ORTHO05D006719 4.0e-14 82.4 73 63.0
GSVIVG01001138001 Vitis vinifera HOM05D005498 ORTHO05D006719 4.0e-14 82.4 71 60.6
MSTRG.22826 Avicennia marina HOM05D005498 ORTHO05D006719 6.8e-14 81.6 73 58.9
Cc04_g05550 Coffea canephora HOM05D005498 ORTHO05D006719 6.8e-14 81.6 73 63.0
ATR0582G093 Amborella trichopoda HOM05D005498 ORTHO05D006719 8.9e-14 81.3 100 54.0
Prupe.1G210100 Prunus persica HOM05D005498 ORTHO05D006719 8.9e-14 81.3 100 53.0
CiPaw.05G096800 Carya illinoinensis HOM05D005498 ORTHO05D006719 1.2e-13 80.9 71 64.8
HPP92_001926 Vanilla planifolia HOM05D005498 ORTHO05D006356 1.2e-13 80.9 73 64.4
Sed0026884 Sechium edule HOM05D005498 ORTHO05D006719 1.5e-13 80.5 71 64.8
TWI36G1055 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 2.0e-13 80.1 100 54.0
Rhsim12G0182600 Rhododendron simsii HOM05D005498 ORTHO05D006719 2.6e-13 79.7 73 63.0
THA.LOC104823693 Tarenaya hassleriana HOM05D005498 ORTHO05D006719 2.6e-13 79.7 72 63.9
CsaV3_6G007610 Cucumis sativus L. HOM05D005498 ORTHO05D006719 3.4e-13 79.3 71 64.8
Cpa.g.sc38.27 Carica papaya HOM05D005498 ORTHO05D006719 4.4e-13 79.0 71 63.4
Aqoxy3G01715 Aquilegia oxysepala HOM05D005498 ORTHO05D006719 9.8e-13 77.8 71 63.4
PGR119G1930 Punica granatum HOM05D005498 ORTHO05D006719 9.8e-13 77.8 100 55.0
TWI75G0967 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 1.3e-12 77.4 71 64.8
TWI75G1441 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 2.2e-12 76.6 71 63.4
Ciclev10028992m.g Citrus clementina HOM05D005498 ORTHO05D006719 2.9e-12 76.3 100 54.0
Glyma.20G075100 Glycine max HOM05D005498 ORTHO05D006719 2.9e-12 76.3 100 51.0
THA.LOC104820204 Tarenaya hassleriana HOM05D005498 ORTHO05D006719 3.7e-12 75.9 71 60.6
Hund15317 Selenicereus undatus HOM05D005498 ORTHO05D006719 6.4e-12 75.1 73 60.3
Sc04g0000010 Simmondsia chinensis HOM05D005498 ORTHO05D006719 8.3e-12 74.7 73 57.5
Sc04g0000070 Simmondsia chinensis HOM05D005498 ORTHO05D006719 8.3e-12 74.7 73 57.5
Lj3g0014785 Lotus japonicus HOM05D005498 ORTHO05D006719 1.1e-11 74.3 71 60.6
MD13G1135200 Malus domestica HOM05D005498 ORTHO05D006719 2.4e-11 73.2 71 60.6
LjContig00470g0019612 Lotus japonicus HOM05D005498 ORTHO05D006719 3.2e-11 72.8 71 57.7
CDE11G0700 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 4.1e-11 72.4 73 56.2
AUR62037729 Chenopodium quinoa HOM05D005498 ORTHO05D006719 5.4e-11 72.0 73 63.0
Hund15325 Selenicereus undatus HOM05D005498 ORTHO05D006719 5.4e-11 72.0 73 57.5
Lalb_Chr02g0144691 Lupinus albus HOM05D005498 ORTHO05D006719 7.0e-11 71.6 99 47.5
MD16G1130900 Malus domestica HOM05D005498 ORTHO05D006719 9.2e-11 71.2 71 59.2
CDE02G3318 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 1.2e-10 70.9 73 56.2
Os02g0234800 Oryza sativa ssp. japonica HOM05D005498 ORTHO05D006719 1.2e-10 70.9 73 58.9
TPR.G25230 Trifolium pratense HOM05D005498 ORTHO05D006719 1.6e-10 70.5 71 56.3
ECA246G1673 Erigeron canadensis HOM05D005498 ORTHO05D006719 2.0e-10 70.1 99 47.5
Lalb_Chr21g0307771 Lupinus albus HOM05D005498 ORTHO05D006719 2.7e-10 69.7 100 49.0
Phvul.003G001500 Phaseolus vulgaris HOM05D005498 ORTHO05D006719 4.6e-10 68.9 100 48.0
CAN.G1008.34 Capsicum annuum HOM05D005498 ORTHO05D006719 1.0e-09 67.8 71 57.7
Glyma.10G123200 Glycine max HOM05D005498 ORTHO05D006719 1.0e-09 67.8 100 50.0
Psat1g052840 Pisum sativum HOM05D005498 ORTHO05D006719 1.0e-09 67.8 71 56.3
AL1G20310 Arabidopsis lyrata HOM05D005498 ORTHO05D006719 1.3e-09 67.4 99 45.5
arahy.Tifrunner.gnm1.ann1.JCC7XL Arachis hypogaea HOM05D005498 ORTHO05D006719 1.7e-09 67.0 71 56.3
PGSC0003DMG400014166 Solanum tuberosum HOM05D005498 ORTHO05D006719 1.7e-09 67.0 73 57.5
Ah.10g024860 Amaranthus hybridus HOM05D005498 ORTHO05D006719 2.3e-09 66.6 74 51.4
arahy.Tifrunner.gnm1.ann1.LXGX9H Arachis hypogaea HOM05D005498 ORTHO05D006719 3.0e-09 66.2 71 54.9
EL10Ac2g02403 Beta vulgaris HOM05D005498 ORTHO05D006719 3.9e-09 65.9 73 57.5
Ca_04134_v3 Cicer arietinum L. HOM05D005498 ORTHO05D006719 5.0e-09 65.5 71 53.5
Mapoly0014s0064 Marchantia polymorpha HOM05D005498 ORTHO05D006719 5.0e-09 65.5 71 54.9
Sopen03g036840 Solanum pennellii HOM05D005498 ORTHO05D006719 5.0e-09 65.5 73 56.2
CSS0028024 Camellia sinensis var. sinensis HOM05D005498 ORTHO05D006719 6.6e-09 65.1 76 52.6
CARHR009720 Cardamine hirsuta HOM05D005498 ORTHO05D006719 6.6e-09 65.1 99 42.4
Medtr6g004180 Medicago truncatula HOM05D005498 ORTHO05D006719 8.6e-09 64.7 71 57.7
Solyc03g117940.3 Solanum lycopersicum HOM05D005498 ORTHO05D006719 8.6e-09 64.7 73 56.2
CSS0017542 Camellia sinensis var. sinensis HOM05D005498 ORTHO05D006719 1.1e-08 64.3 71 59.2
Phvul.009G235000 Phaseolus vulgaris HOM05D005498 ORTHO05D006719 1.1e-08 64.3 100 45.0
Thhalv10008494m.g Eutrema salsugineum HOM05D005498 ORTHO05D006719 1.9e-08 63.5 99 43.4
A09p65320 Brassica napus HOM05D005498 ORTHO05D006719 4.3e-08 62.4 99 42.4
AT1G09760 Arabidopsis thaliana HOM05D005498 ORTHO05D006719 5.6e-08 62.0 71 54.9
BraA09t41876Z Brassica rapa HOM05D005498 ORTHO05D006719 5.6e-08 62.0 99 42.4
RcHm_v2.0_Chr4g0428191 Rosa chinensis HOM05D005498 ORTHO05D006719 5.6e-08 62.0 71 54.9
C08p13170 Brassica napus HOM05D005498 ORTHO05D006719 7.3e-08 61.6 99 42.4
BolC8t48946H Brassica oleracea HOM05D005498 ORTHO05D006719 7.3e-08 61.6 99 42.4
FAN07G2790 Fragaria x ananassa HOM05D005498 ORTHO05D006719 7.3e-08 61.6 71 54.9
A08p34360 Brassica napus HOM05D005498 ORTHO05D006719 9.5e-08 61.2 99 43.4
BraA08t35348Z Brassica rapa HOM05D005498 ORTHO05D006719 9.5e-08 61.2 99 43.4
Carub.0001s0910 Capsella rubella HOM05D005498 ORTHO05D006719 1.2e-07 60.8 99 42.4
FAN17G1337 Fragaria x ananassa HOM05D005498 ORTHO05D006719 1.2e-07 60.8 71 54.9
Sp1g08350 Schrenkiella parvula HOM05D005498 ORTHO05D006719 1.2e-07 60.8 99 41.4
VMungo0251G3521 Vigna mungo HOM05D005498 ORTHO05D006719 1.2e-07 60.8 100 44.0
A06p06430 Brassica napus HOM05D005498 ORTHO05D006719 1.6e-07 60.5 99 41.4
C05p07830 Brassica napus HOM05D005498 ORTHO05D006719 1.6e-07 60.5 99 41.4
BolC5t29534H Brassica oleracea HOM05D005498 ORTHO05D006719 1.6e-07 60.5 99 41.4
BraA06t23854Z Brassica rapa HOM05D005498 ORTHO05D006719 1.6e-07 60.5 99 41.4
FvH4_4g21991 Fragaria vesca HOM05D005498 ORTHO05D006719 2.1e-07 60.1 71 53.5
unitig_8.g3047 Utricularia gibba HOM05D005498 ORTHO05D006719 4.7e-07 58.9 100 38.0
Zm00001eb064600 Zea mays HOM05D005498 ORTHO05D006719 4.7e-07 58.9 73 52.1
COL.COLO4_24568 Corchorus olitorius HOM05D005498 ORTHO05D006719 6.2e-07 58.5 71 53.5
C08p49270 Brassica napus HOM05D005498 ORTHO05D006719 8.0e-07 58.2 99 40.4
BcaC07g41860 Brassica carinata HOM05D005498 ORTHO05D006719 1.4e-06 57.4 99 40.4
BolC8t52462H Brassica oleracea HOM05D005498 ORTHO05D006719 1.8e-06 57.0 99 39.4


User provided reference genes

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