Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO591G0378 Papaver somniferum HOM05D005361 ORTHO05D006518 9.6e-195 683.3 348 100.0
PSO170G3617 Papaver somniferum HOM05D005361 ORTHO05D006518 8.5e-119 431.0 433 58.4
PSO357G0277 Papaver somniferum HOM05D005361 ORTHO05D006518 2.5e-118 429.5 433 57.7
TAR362G0767 Trochodendron aralioides HOM05D005361 ORTHO05D006518 4.9e-74 282.3 434 40.1
MBI18_g24951_MAGBIO Magnolia biondii HOM05D005361 ORTHO05D006518 1.9e-73 280.4 440 40.2
TAR365G0822 Trochodendron aralioides HOM05D005361 ORTHO05D006518 1.9e-73 280.4 441 40.4
Nn3g21622 Nelumbo nucifera HOM05D005361 ORTHO05D006518 7.3e-70 268.5 434 38.7
RcHm_v2.0_Chr3g0456811 Rosa chinensis HOM05D005361 ORTHO05D006518 8.4e-66 255.0 426 39.0
CiPaw.07G027300 Carya illinoinensis HOM05D005361 ORTHO05D006518 7.1e-65 251.9 442 37.8
Thecc.05G320500 Theobroma cacao HOM05D005361 ORTHO05D006518 7.1e-65 251.9 433 37.6
Prupe.6G315500 Prunus persica HOM05D005361 ORTHO05D006518 9.3e-65 251.5 423 38.1
Atru.chr2.142 Acer truncatum HOM05D005361 ORTHO05D006518 2.1e-64 250.4 432 38.0
MD04G1195700 Malus domestica HOM05D005361 ORTHO05D006518 2.7e-64 250.0 433 37.0
QL03p018132 Quercus lobata HOM05D005361 ORTHO05D006518 2.7e-64 250.0 442 37.3
CSS0043675 Camellia sinensis var. sinensis HOM05D005361 ORTHO05D006518 7.9e-64 248.4 430 37.2
Gorai.013G128600 Gossypium raimondii HOM05D005361 ORTHO05D006518 1.0e-63 248.1 433 37.0
Aqoxy6G02436 Aquilegia oxysepala HOM05D005361 ORTHO05D006518 3.9e-63 246.1 433 36.7
FAN05G4787 Fragaria x ananassa HOM05D005361 ORTHO05D006518 3.9e-63 246.1 427 38.6
FvH4_6g07170 Fragaria vesca HOM05D005361 ORTHO05D006518 5.1e-63 245.7 426 38.0
FAN14G4398 Fragaria x ananassa HOM05D005361 ORTHO05D006518 5.1e-63 245.7 426 38.0
COL.COLO4_04134 Corchorus olitorius HOM05D005361 ORTHO05D006518 1.9e-62 243.8 435 36.8
CiPaw.08G157000 Carya illinoinensis HOM05D005361 ORTHO05D006518 2.5e-62 243.4 428 36.7
Rhsim11G0093500 Rhododendron simsii HOM05D005361 ORTHO05D006518 4.3e-62 242.7 442 37.6
GSVIVG01031212001 Vitis vinifera HOM05D005361 ORTHO05D006518 5.6e-62 242.3 434 35.9
CANSAT54G2643 Cannabis sativa HOM05D005361 ORTHO05D006518 7.4e-62 241.9 432 37.0
TWI56G0631 Tripterygium wilfordii HOM05D005361 ORTHO05D006518 7.4e-62 241.9 434 36.4
MD12G1208000 Malus domestica HOM05D005361 ORTHO05D006518 2.8e-61 240.0 425 37.4
Peaxi162Scf00673g00026 Petunia axillaris HOM05D005361 ORTHO05D006518 4.8e-61 239.2 436 37.6
Gohir.A13G111600 Gossypium hirsutum HOM05D005361 ORTHO05D006518 6.2e-61 238.8 429 36.4
ATR0706G045 Amborella trichopoda HOM05D005361 ORTHO05D006518 4.0e-60 236.1 438 35.6
AUR62000693 Chenopodium quinoa HOM05D005361 ORTHO05D006518 4.5e-59 232.6 419 36.3
HPP92_001070 Vanilla planifolia HOM05D005361 ORTHO05D006518 7.6e-59 231.9 427 36.1
FAN04G2120 Fragaria x ananassa HOM05D005361 ORTHO05D006518 3.8e-58 229.6 419 36.5
Hund07131 Selenicereus undatus HOM05D005361 ORTHO05D006518 6.4e-58 228.8 429 35.4
Duzib177G0912 Durio zibethinus HOM05D005361 ORTHO05D006518 2.4e-57 226.9 434 35.7
Solyc01g100270.4 Solanum lycopersicum HOM05D005361 ORTHO05D006518 2.4e-57 226.9 439 36.0
Glyma.20G239300 Glycine max HOM05D005361 ORTHO05D006518 3.2e-57 226.5 442 35.5
Manes.08G112700 Manihot esculenta HOM05D005361 ORTHO05D006518 3.2e-57 226.5 429 35.2
Ca_10160_v3 Cicer arietinum L. HOM05D005361 ORTHO05D006518 2.7e-56 223.4 435 34.9
ClCG03G017650 Citrullus lanatus HOM05D005361 ORTHO05D006518 2.7e-56 223.4 430 35.1
Sopen01g043780 Solanum pennellii HOM05D005361 ORTHO05D006518 2.7e-56 223.4 440 35.9
Potri.005G020000 Populus trichocarpa HOM05D005361 ORTHO05D006518 6.0e-56 222.2 441 34.2
Sed0027360 Sechium edule HOM05D005361 ORTHO05D006518 6.0e-56 222.2 427 35.4
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 7.9e-56 221.9 420 36.4
Lj5C338G3 Lonicera japonica HOM05D005361 ORTHO05D006518 1.8e-55 220.7 467 33.6
Actinidia35531 Actinidia chinensis HOM05D005361 ORTHO05D006518 2.3e-55 220.3 388 38.4
Glyma.10G148600 Glycine max HOM05D005361 ORTHO05D006518 3.0e-55 219.9 429 33.8
Phvul.007G200000 Phaseolus vulgaris HOM05D005361 ORTHO05D006518 3.0e-55 219.9 425 34.4
Sc09g0002730 Simmondsia chinensis HOM05D005361 ORTHO05D006518 3.9e-55 219.5 426 34.7
MELO3C015263.2 Cucumis melo HOM05D005361 ORTHO05D006518 8.7e-55 218.4 430 34.0
DCAR_005413 Daucus carota HOM05D005361 ORTHO05D006518 8.7e-55 218.4 429 36.1
Lsat_1_v5_gn_5_102760 Lactuca sativa HOM05D005361 ORTHO05D006518 8.7e-55 218.4 431 34.6
FAN08G1915 Fragaria x ananassa HOM05D005361 ORTHO05D006518 1.9e-54 217.2 419 36.0
Thhalv10023373m.g Eutrema salsugineum HOM05D005361 ORTHO05D006518 3.3e-54 216.5 420 35.7
CsaV3_1G038340 Cucumis sativus L. HOM05D005361 ORTHO05D006518 4.3e-54 216.1 431 34.3
ECA234G3067 Erigeron canadensis HOM05D005361 ORTHO05D006518 5.6e-54 215.7 422 34.4
Lj9A208G25 Lonicera japonica HOM05D005361 ORTHO05D006518 2.1e-53 213.8 387 35.9
Aa31LG2G11550 Aethionema arabicum HOM05D005361 ORTHO05D006518 6.2e-53 212.2 416 36.3
Ciclev10000759m.g Citrus clementina HOM05D005361 ORTHO05D006518 6.2e-53 212.2 421 35.4
HanXRQChr10g0299251 Helianthus annuus HOM05D005361 ORTHO05D006518 8.1e-53 211.8 430 35.1
Os05g0357100 Oryza sativa ssp. japonica HOM05D005361 ORTHO05D006518 1.4e-52 211.1 448 32.4
arahy.Tifrunner.gnm1.ann1.77BPS2 Arachis hypogaea HOM05D005361 ORTHO05D006518 2.4e-52 210.3 440 33.6
RcHm_v2.0_Chr7g0235801 Rosa chinensis HOM05D005361 ORTHO05D006518 2.4e-52 210.3 419 35.6
Migut.N02108 Erythranthe guttata HOM05D005361 ORTHO05D006518 3.1e-52 209.9 436 34.4
TPR.G2615 Trifolium pratense HOM05D005361 ORTHO05D006518 1.2e-51 208.0 439 33.0
Atru.chr2.137 Acer truncatum HOM05D005361 ORTHO05D006518 1.5e-51 207.6 320 38.8
Lj5g0016289 Lotus japonicus HOM05D005361 ORTHO05D006518 1.5e-51 207.6 441 32.4
AT1G56310 Arabidopsis thaliana HOM05D005361 ORTHO05D006518 2.0e-51 207.2 444 33.8
AL1G65920 Arabidopsis lyrata HOM05D005361 ORTHO05D006518 3.4e-51 206.5 435 33.8
Psat0s1118g0080 Pisum sativum HOM05D005361 ORTHO05D006518 1.0e-50 204.9 436 32.1
BcaB07g31118 Brassica carinata HOM05D005361 ORTHO05D006518 1.3e-50 204.5 420 33.8
Sp2g06550 Schrenkiella parvula HOM05D005361 ORTHO05D006518 1.3e-50 204.5 430 34.4
CAN.G1273.4 Capsicum annuum HOM05D005361 ORTHO05D006518 1.7e-50 204.1 379 37.2
PGR083G2525 Punica granatum HOM05D005361 ORTHO05D006518 2.2e-50 203.8 411 32.6
PGSC0003DMG400002810 Solanum tuberosum HOM05D005361 ORTHO05D006518 2.2e-50 203.8 422 35.5
arahy.Tifrunner.gnm1.ann1.1QQ1RG Arachis hypogaea HOM05D005361 ORTHO05D006518 2.9e-50 203.4 450 33.8
Zm00001eb347420 Zea mays HOM05D005361 ORTHO05D006518 3.8e-50 203.0 432 31.2
THA.LOC104805911 Tarenaya hassleriana HOM05D005361 ORTHO05D006518 4.9e-50 202.6 423 33.3
BraA09t37532Z Brassica rapa HOM05D005361 ORTHO05D006518 1.4e-49 201.1 436 33.5
AUR62005265 Chenopodium quinoa HOM05D005361 ORTHO05D006518 1.4e-49 201.1 464 32.1
Lalb_Chr02g0147921 Lupinus albus HOM05D005361 ORTHO05D006518 1.9e-49 200.7 432 33.1
C09p24140 Brassica napus HOM05D005361 ORTHO05D006518 3.2e-49 199.9 432 32.9
BolC9t55332H Brassica oleracea HOM05D005361 ORTHO05D006518 3.2e-49 199.9 432 32.9
BcaC04g22042 Brassica carinata HOM05D005361 ORTHO05D006518 7.1e-49 198.7 432 32.9
Cpa.g.sc48.138 Carica papaya HOM05D005361 ORTHO05D006518 7.1e-49 198.7 392 36.0
MSTRG.27959 Avicennia marina HOM05D005361 ORTHO05D006518 9.3e-49 198.4 437 33.6
Cc02_g34760 Coffea canephora HOM05D005361 ORTHO05D006518 9.3e-49 198.4 433 34.2
SalBow3G1325 Salvia bowleyana HOM05D005361 ORTHO05D006518 9.3e-49 198.4 393 35.1
SGA_v2.0_scaffold80G25882 Striga asiatica HOM05D005361 ORTHO05D006518 1.6e-48 197.6 442 33.3
Carub.0002s0785 Capsella rubella HOM05D005361 ORTHO05D006518 6.7e-47 192.2 439 33.0
CARHR289850 Cardamine hirsuta HOM05D005361 ORTHO05D006518 8.7e-47 191.8 420 33.6
Nitab4.5_0000368g0310 Nicotiana tabacum HOM05D005361 ORTHO05D006518 4.3e-46 189.5 403 34.5
Nitab4.5_0006072g0040 Nicotiana tabacum HOM05D005361 ORTHO05D006518 7.4e-46 188.7 413 34.9
PSO832G4367 Papaver somniferum HOM05D005361 ORTHO05D006518 1.3e-45 188.0 229 52.8
A09p19140 Brassica napus HOM05D005361 ORTHO05D006518 2.1e-45 187.2 461 31.7
vmacro01549 Vaccinium macrocarpon HOM05D005361 ORTHO05D006518 2.8e-45 186.8 529 28.9
FvH4_5g34880 Fragaria vesca HOM05D005361 ORTHO05D006518 2.4e-44 183.7 353 34.8
VMungo0720G2281 Vigna mungo HOM05D005361 ORTHO05D006518 9.0e-44 181.8 396 32.6
Haze_04086 Corylus avellana HOM05D005361 ORTHO05D006518 2.0e-43 180.6 435 32.0
Oeu064805.1 Olea europaea HOM05D005361 ORTHO05D006518 5.5e-41 172.6 263 40.7
Actinidia16845 Actinidia chinensis HOM05D005361 ORTHO05D006518 1.2e-40 171.4 300 38.0
Migut.H01140 Erythranthe guttata HOM05D005361 ORTHO05D006518 2.8e-37 160.2 438 29.7
SHI18068 Sapria himalayana HOM05D005361 ORTHO05D006518 1.7e-34 151.0 333 29.7
unitig_0.g2322 Utricularia gibba HOM05D005361 ORTHO05D006518 5.1e-31 139.4 374 30.7
DCAR_025270 Daucus carota HOM05D005361 ORTHO05D006518 5.7e-30 136.0 354 33.3
Gohir.D13G114500 Gossypium hirsutum HOM05D005361 ORTHO05D006518 5.7e-30 136.0 232 38.4
Oeu053699.1 Olea europaea HOM05D005361 ORTHO05D006518 2.0e-27 127.5 340 31.2
Dinv30866 Davidia involucrata HOM05D005361 ORTHO05D006518 3.4e-27 126.7 224 35.7
Ah.06g189010 Amaranthus hybridus HOM05D005361 ORTHO05D006518 1.7e-26 124.4 231 32.9
FAN09G0306 Fragaria x ananassa HOM05D005361 ORTHO05D006518 3.0e-23 113.6 168 39.3
Lalb_Chr21g0310361 Lupinus albus HOM05D005361 ORTHO05D006518 3.3e-22 110.2 360 29.7
AagrBONN_evm.TU.Sc2ySwM_368.1952 Anthoceros agrestis HOM05D005361 ORTHO05D006518 7.7e-19 99.0 415 25.5
SEGI_17557 Sequoiadendron giganteum HOM05D005361 ORTHO05D006518 8.5e-18 95.5 229 30.1
SEGI_28492 Sequoiadendron giganteum HOM05D005361 ORTHO05D006518 1.9e-17 94.4 233 28.8
MELO3C035005.2 Cucumis melo HOM05D005361 ORTHO05D006518 2.9e-10 70.5 208 26.4
CBR_g47086 Chara braunii HOM05D005361 ORTHO05D006518 9.4e-09 65.5 137 30.7


User provided reference genes

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