Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2715 Papaver somniferum HOM05D006375 ORTHO05D008188 0.0e+00 1828.1 973 100.0
PSO017G5819 Papaver somniferum HOM05D006375 ORTHO05D008188 0.0e+00 1616.7 908 91.9
TAR374G0480 Trochodendron aralioides HOM05D006375 ORTHO05D008188 6.9e-283 977.6 889 61.4
CSS0034734 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 2.6e-266 922.5 906 57.3
Nn3g18305 Nelumbo nucifera HOM05D006375 ORTHO05D008188 2.4e-264 916.0 945 55.1
Aqoxy3G00081 Aquilegia oxysepala HOM05D006375 ORTHO05D008188 2.1e-260 902.9 890 56.4
Actinidia06495 Actinidia chinensis HOM05D006375 ORTHO05D008188 4.5e-258 895.2 889 56.7
Hma1.2p1_0158F.1_g070200 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 4.2e-256 888.6 879 56.0
Cfa007814 Carpinus fangiana HOM05D006375 ORTHO05D008188 2.7e-255 885.9 955 52.3
QL02p058134 Quercus lobata HOM05D006375 ORTHO05D008188 4.6e-255 885.2 943 53.2
QL93p0100_0515 Quercus lobata HOM05D006375 ORTHO05D008188 9.6e-253 877.5 896 54.5
Thecc.04G114800 Theobroma cacao HOM05D006375 ORTHO05D008188 4.1e-251 872.1 895 55.2
Lj4C263T11 Lonicera japonica HOM05D006375 ORTHO05D008188 6.9e-251 871.3 895 54.7
Rhsim10G0177200 Rhododendron simsii HOM05D006375 ORTHO05D008188 2.6e-250 869.4 929 53.2
Potri.004G087400 Populus trichocarpa HOM05D006375 ORTHO05D008188 1.7e-249 866.7 888 55.9
Ciclev10010990m.g Citrus clementina HOM05D006375 ORTHO05D008188 2.2e-249 866.3 885 55.9
Gohir.A07G078100 Gossypium hirsutum HOM05D006375 ORTHO05D008188 9.3e-248 860.9 881 55.6
Haze_14261 Corylus avellana HOM05D006375 ORTHO05D008188 2.3e-246 856.3 935 52.4
CANSAT64G0280 Cannabis sativa HOM05D006375 ORTHO05D008188 2.5e-245 852.8 952 51.1
RcHm_v2.0_Chr3g0493161 Rosa chinensis HOM05D006375 ORTHO05D008188 2.6e-242 842.8 880 53.4
Gohir.D07G082900 Gossypium hirsutum HOM05D006375 ORTHO05D008188 2.9e-241 839.3 881 54.8
Atru.chr1.1908 Acer truncatum HOM05D006375 ORTHO05D008188 6.5e-241 838.2 886 53.8
Gorai.001G088500 Gossypium raimondii HOM05D006375 ORTHO05D008188 2.5e-240 836.3 881 54.4
Sabra04G0058300 Salix brachista HOM05D006375 ORTHO05D008188 2.1e-239 833.2 885 53.4
PGSC0003DMG400015671 Solanum tuberosum HOM05D006375 ORTHO05D008188 3.6e-239 832.4 887 53.1
Hund04476 Selenicereus undatus HOM05D006375 ORTHO05D008188 7.9e-239 831.2 914 51.9
Solyc11g011150.2 Solanum lycopersicum HOM05D006375 ORTHO05D008188 1.4e-238 830.5 887 53.0
Nitab4.5_0010112g0040 Nicotiana tabacum HOM05D006375 ORTHO05D008188 2.3e-238 829.7 886 53.5
Nitab4.5_0000201g0170 Nicotiana tabacum HOM05D006375 ORTHO05D008188 5.1e-238 828.6 888 53.8
Sopen11g005910 Solanum pennellii HOM05D006375 ORTHO05D008188 6.7e-238 828.2 885 53.4
MSTRG.2615 Avicennia marina HOM05D006375 ORTHO05D008188 2.2e-236 823.2 901 52.6
Manes.01G118300 Manihot esculenta HOM05D006375 ORTHO05D008188 3.4e-234 815.8 877 52.2
COL.COLO4_05994 Corchorus olitorius HOM05D006375 ORTHO05D008188 5.0e-233 812.0 866 54.5
vmacro07694 Vaccinium macrocarpon HOM05D006375 ORTHO05D008188 1.2e-231 807.4 946 50.1
EL10Ac6g15274 Beta vulgaris HOM05D006375 ORTHO05D008188 3.6e-231 805.8 881 51.9
TPR.G8261 Trifolium pratense HOM05D006375 ORTHO05D008188 4.7e-231 805.4 882 52.3
Sc14g0006560 Simmondsia chinensis HOM05D006375 ORTHO05D008188 6.1e-231 805.1 884 52.6
DCAR_003431 Daucus carota HOM05D006375 ORTHO05D008188 6.7e-230 801.6 919 51.4
MD17G1258300 Malus domestica HOM05D006375 ORTHO05D008188 1.1e-229 800.8 921 50.3
LjContig00141g0022245 Lotus japonicus HOM05D006375 ORTHO05D008188 5.7e-229 798.5 936 48.8
TWI53G2003 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 5.7e-229 798.5 880 51.1
Medtr5g078360 Medicago truncatula HOM05D006375 ORTHO05D008188 9.7e-229 797.7 881 51.5
FvH4_1g28770 Fragaria vesca HOM05D006375 ORTHO05D008188 1.3e-228 797.3 883 51.8
SGA_v2.0_scaffold2G00936 Striga asiatica HOM05D006375 ORTHO05D008188 6.3e-228 795.0 937 49.7
GSVIVG01030782001 Vitis vinifera HOM05D006375 ORTHO05D008188 5.3e-227 792.0 901 50.3
CiPaw.03G071800 Carya illinoinensis HOM05D006375 ORTHO05D008188 9.1e-227 791.2 890 51.1
VMungo0647G2002 Vigna mungo HOM05D006375 ORTHO05D008188 9.1e-227 791.2 884 51.6
CsaV3_5G024160 Cucumis sativus L. HOM05D006375 ORTHO05D008188 1.2e-226 790.8 918 50.9
SalBow3G0693 Salvia bowleyana HOM05D006375 ORTHO05D008188 2.0e-226 790.0 907 49.7
Sed0006511 Sechium edule HOM05D006375 ORTHO05D008188 2.6e-226 789.6 891 50.8
HanXRQChr14g0444701 Helianthus annuus HOM05D006375 ORTHO05D008188 1.3e-225 787.3 929 50.1
ATR0564G422 Amborella trichopoda HOM05D006375 ORTHO05D008188 2.9e-225 786.2 897 50.5
FAN19G0463 Fragaria x ananassa HOM05D006375 ORTHO05D008188 3.8e-225 785.8 894 51.0
Glyma.14G214000 Glycine max HOM05D006375 ORTHO05D008188 5.0e-225 785.4 881 51.6
ECA238G1164 Erigeron canadensis HOM05D006375 ORTHO05D008188 1.9e-224 783.5 932 49.8
arahy.Tifrunner.gnm1.ann1.WVM8AG Arachis hypogaea HOM05D006375 ORTHO05D008188 8.0e-223 778.1 905 49.0
TWI74G0084 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 1.4e-222 777.3 879 50.2
FAN23G0218 Fragaria x ananassa HOM05D006375 ORTHO05D008188 6.7e-222 775.0 915 49.5
Lalb_Chr04g0251361 Lupinus albus HOM05D006375 ORTHO05D008188 1.3e-220 770.8 924 49.0
arahy.Tifrunner.gnm1.ann1.EH3TRU Arachis hypogaea HOM05D006375 ORTHO05D008188 1.7e-220 770.4 919 48.6
AUR62003604 Chenopodium quinoa HOM05D006375 ORTHO05D008188 9.1e-219 764.6 899 49.6
Prupe.3G161000 Prunus persica HOM05D006375 ORTHO05D008188 2.0e-218 763.5 943 48.5
Cc07_g13460 Coffea canephora HOM05D006375 ORTHO05D008188 2.7e-218 763.1 879 51.2
CSS0009955 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 5.0e-217 758.8 736 57.9
Hma1.2p1_0158F.1_g070190 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 5.0e-217 758.8 758 56.1
MELO3C022863.2 Cucumis melo HOM05D006375 ORTHO05D008188 2.5e-216 756.5 907 49.1
CDE05G1980 Ceratophyllum demersum HOM05D006375 ORTHO05D008188 8.0e-215 751.5 887 49.0
THA.LOC104827188 Tarenaya hassleriana HOM05D006375 ORTHO05D008188 1.0e-214 751.1 937 48.0
Zm00001eb041880 Zea mays HOM05D006375 ORTHO05D008188 3.0e-214 749.6 881 49.3
Psat2g047400 Pisum sativum HOM05D006375 ORTHO05D008188 2.0e-213 746.9 884 49.4
AUR62017915 Chenopodium quinoa HOM05D006375 ORTHO05D008188 4.4e-213 745.7 884 49.3
Cpa.g.sc116.55 Carica papaya HOM05D006375 ORTHO05D008188 9.1e-211 738.0 917 47.8
Migut.H02262 Erythranthe guttata HOM05D006375 ORTHO05D008188 9.1e-211 738.0 845 51.1
Phvul.008G233100 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 2.3e-209 733.4 880 49.3
PGR004G2253 Punica granatum HOM05D006375 ORTHO05D008188 4.2e-208 729.2 880 48.8
Carub.0006s1484 Capsella rubella HOM05D006375 ORTHO05D008188 5.5e-208 728.8 924 46.2
AL6G27600 Arabidopsis lyrata HOM05D006375 ORTHO05D008188 9.5e-208 728.0 931 46.0
ClCG01G008800 Citrullus lanatus HOM05D006375 ORTHO05D008188 1.6e-207 727.2 922 48.2
AT5G16630 Arabidopsis thaliana HOM05D006375 ORTHO05D008188 2.3e-206 723.4 874 47.1
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 3.4e-205 719.5 887 46.9
Os08g0427500 Oryza sativa ssp. japonica HOM05D006375 ORTHO05D008188 9.8e-205 718.0 882 46.8
CAN.G222.25 Capsicum annuum HOM05D006375 ORTHO05D008188 1.3e-204 717.6 894 47.8
Ah.02g121850 Amaranthus hybridus HOM05D006375 ORTHO05D008188 2.8e-204 716.5 923 45.8
Thhalv10012651m.g Eutrema salsugineum HOM05D006375 ORTHO05D008188 9.2e-203 711.4 877 46.1
Aa31LG11G13020 Aethionema arabicum HOM05D006375 ORTHO05D008188 3.5e-202 709.5 973 45.2
HPP92_024778 Vanilla planifolia HOM05D006375 ORTHO05D008188 4.5e-202 709.1 931 46.3
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 1.0e-201 708.0 889 46.6
BraA02t05338Z Brassica rapa HOM05D006375 ORTHO05D008188 2.3e-201 706.8 889 46.3
CARHR196570 Cardamine hirsuta HOM05D006375 ORTHO05D008188 2.3e-201 706.8 915 46.4
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 5.0e-201 705.7 910 45.6
MBI19_g34823_MAGBIO Magnolia biondii HOM05D006375 ORTHO05D008188 1.0e-198 698.0 625 60.0
Sp6g27540 Schrenkiella parvula HOM05D006375 ORTHO05D008188 2.6e-197 693.3 911 44.5
BolC2t06767H Brassica oleracea HOM05D006375 ORTHO05D000255 1.9e-192 677.2 937 43.8
Peaxi162Scf00305g00616 Petunia axillaris HOM05D006375 ORTHO05D008188 2.9e-188 663.3 710 53.7
Lsat_1_v5_gn_2_69340 Lactuca sativa HOM05D006375 ORTHO05D008188 1.5e-184 651.0 925 44.5
SEGI_37856 Sequoiadendron giganteum HOM05D006375 ORTHO05D008188 2.2e-180 637.1 961 41.7
unitig_899.g14571 Utricularia gibba HOM05D006375 ORTHO05D008188 1.2e-175 621.3 892 45.2
Eucgr.F02852 Eucalyptus grandis HOM05D006375 ORTHO05D008188 1.1e-171 608.2 628 52.9
Phvul.010G024866 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 1.9e-171 607.4 740 49.2
Dinv28205 Davidia involucrata HOM05D006375 ORTHO05D008188 3.0e-169 600.1 736 49.5
SHI25352 Sapria himalayana HOM05D006375 ORTHO05D008188 3.0e-153 547.0 667 48.9
Pp3c22_7360 Physcomitrium patens HOM05D006375 ORTHO05D008188 1.1e-147 528.5 947 37.7
SMO139G0070 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 1.5e-144 518.1 876 38.8
AagrBONN_evm.TU.Sc2ySwM_340.97 Anthoceros agrestis HOM05D006375 ORTHO05D008188 4.8e-143 513.1 857 40.1
SMO157G0011 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 1.5e-141 508.1 889 38.5
Mapoly0069s0010 Marchantia polymorpha HOM05D006375 ORTHO05D008188 8.4e-140 502.3 980 37.8
FAN26G3226 Fragaria x ananassa HOM05D006375 ORTHO05D008188 2.6e-120 437.6 489 50.7
CBR_g3816 Chara braunii HOM05D006375 ORTHO05D008188 1.2e-109 402.1 1105 30.7
Ca_22495_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 3.3e-91 340.9 305 57.4
Ca_22493_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 6.4e-55 220.3 204 54.4
PRCOL_00001710 Prasinoderma coloniale HOM05D006375 ORTHO05D008188 7.8e-53 213.4 896 25.7
MCO12G035 Micromonas commoda HOM05D006375 ORTHO05D008188 4.3e-43 181.0 438 29.9
Haze_27154 Corylus avellana HOM05D006375 ORTHO05D008188 9.3e-38 163.3 252 37.3
Peaxi162Scf00305g00615 Petunia axillaris HOM05D006375 ORTHO05D008188 2.7e-37 161.8 160 51.9
Nn2g13217 Nelumbo nucifera HOM05D006375 ORTHO05D008188 1.4e-30 139.4 138 50.7
Cre12.g557400 Chlamydomonas reinhardtii HOM05D006375 ORTHO05D008188 1.6e-26 125.9 312 31.1
Cfa025272 Carpinus fangiana HOM05D006375 ORTHO05D008188 1.9e-22 112.5 271 27.3
Cfa024716 Carpinus fangiana HOM05D006375 ORTHO05D008188 1.1e-17 96.7 191 29.3
SHI25356 Sapria himalayana HOM05D006375 ORTHO05D008188 1.1e-17 96.7 91 58.2
FAN26G2035 Fragaria x ananassa HOM05D006375 ORTHO05D008188 5.0e-15 87.8 88 52.3
CAN.G222.26 Capsicum annuum HOM05D006375 ORTHO05D008188 6.1e-13 80.9 98 48.0
COL.COLO4_05996 Corchorus olitorius HOM05D006375 ORTHO05D000012 4.3e-11 74.7 108 45.4
PSO339G0517 Papaver somniferum HOM05D000554 ORTHO05D000429 5.9e-08 64.3 86 43.0
Zm00001eb105420 Zea mays HOM05D005479 ORTHO05D007756 9.4e-06 57.0 72 36.1


User provided reference genes

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