Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0211 Papaver somniferum HOM05D005238 ORTHO05D006337 6.0e-152 540.8 274 100.0
SalBow8G4928 Salvia bowleyana HOM05D005238 ORTHO05D006337 4.8e-16 89.4 217 38.2
Oeu052006.1 Olea europaea HOM05D005238 ORTHO05D006337 1.1e-15 88.2 245 35.1
Gorai.013G178100 Gossypium raimondii HOM05D005238 ORTHO05D006337 4.1e-15 86.3 224 35.7
Oeu003828.2 Olea europaea HOM05D005238 ORTHO05D006337 1.5e-14 84.3 217 35.9
Gohir.D13G157300 Gossypium hirsutum HOM05D005238 ORTHO05D006337 2.0e-14 84.0 233 34.8
PSO017G0328 Papaver somniferum HOM05D005238 ORTHO05D006337 2.0e-14 84.0 171 36.8
TPR.G9757 Trifolium pratense HOM05D005238 ORTHO05D006337 5.9e-14 82.4 219 34.7
CSS0024118 Camellia sinensis var. sinensis HOM05D005238 ORTHO05D006337 1.7e-13 80.9 224 36.6
PSO170G0319 Papaver somniferum HOM05D005238 ORTHO05D006337 2.9e-13 80.1 166 36.7
Manes.06G171800 Manihot esculenta HOM05D005238 ORTHO05D006337 1.4e-12 77.8 221 33.0
BolC5t30204H Brassica oleracea HOM05D005238 ORTHO05D006337 4.2e-12 76.3 154 39.0
Lalb_Chr25g0284971 Lupinus albus HOM05D005238 ORTHO05D006337 5.5e-12 75.9 115 41.7
BcaC05g25524 Brassica carinata HOM05D005238 ORTHO05D006337 7.2e-12 75.5 161 37.9
vmacro11663 Vaccinium macrocarpon HOM05D005238 ORTHO05D006337 7.2e-12 75.5 216 33.8
A08p31340 Brassica napus HOM05D000001 ORTHO05D000003 2.1e-11 73.9 158 34.8
FvH4_3g15770 Fragaria vesca HOM05D005238 ORTHO05D006337 3.6e-11 73.2 215 36.3
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 3.6e-11 73.2 215 36.3
Aa31LG7G1130 Aethionema arabicum HOM05D005238 ORTHO05D006337 4.7e-11 72.8 125 37.6
Duzib213G1032 Durio zibethinus HOM05D005238 ORTHO05D006337 6.1e-11 72.4 184 31.0
Glyma.15G255400 Glycine max HOM05D005238 ORTHO05D006337 6.1e-11 72.4 133 38.3
Gohir.A13G153000 Gossypium hirsutum HOM05D005238 ORTHO05D006337 7.9e-11 72.0 169 34.9
Medtr2g069490 Medicago truncatula HOM05D005238 ORTHO05D006337 7.9e-11 72.0 115 41.7
TAR627G0595 Trochodendron aralioides HOM05D005238 ORTHO05D006337 7.9e-11 72.0 143 37.8
unitig_748.g7636 Utricularia gibba HOM05D005238 ORTHO05D006337 7.9e-11 72.0 228 34.6
Cc05_g16060 Coffea canephora HOM05D005238 ORTHO05D006337 1.8e-10 70.9 218 31.7
CARHR017080 Cardamine hirsuta HOM05D005238 ORTHO05D006337 2.3e-10 70.5 220 34.5
AUR62039165 Chenopodium quinoa HOM05D005238 ORTHO05D006337 2.3e-10 70.5 215 33.0
Nn6g31521 Nelumbo nucifera HOM05D005238 ORTHO05D006337 2.3e-10 70.5 120 39.2
Ca_03677_v3 Cicer arietinum L. HOM05D005238 ORTHO05D006337 3.0e-10 70.1 110 41.8
Dinv42511 Davidia involucrata HOM05D005238 ORTHO05D006337 3.0e-10 70.1 213 32.4
Lalb_Chr20g0108761 Lupinus albus HOM05D005238 ORTHO05D006337 3.0e-10 70.1 134 37.3
Phvul.005G056900 Phaseolus vulgaris HOM05D005238 ORTHO05D006337 3.0e-10 70.1 212 32.1
Solyc10g005590.4 Solanum lycopersicum HOM05D005238 ORTHO05D006337 3.0e-10 70.1 116 39.7
Sopen10g001560 Solanum pennellii HOM05D005238 ORTHO05D006337 3.0e-10 70.1 116 39.7
PGSC0003DMG400011240 Solanum tuberosum HOM05D005238 ORTHO05D006337 3.0e-10 70.1 116 39.7
VMungo1080G1161 Vigna mungo HOM05D005238 ORTHO05D006337 5.1e-10 69.3 212 31.6
BcaC07g38806 Brassica carinata HOM05D005238 ORTHO05D006337 6.7e-10 68.9 188 34.0
DCAR_016821 Daucus carota HOM05D005238 ORTHO05D006337 6.7e-10 68.9 159 36.5
Glyma.08G172000 Glycine max HOM05D005238 ORTHO05D006337 6.7e-10 68.9 133 36.8
QL04p073782 Quercus lobata HOM05D005238 ORTHO05D006337 8.8e-10 68.6 115 39.1
ATR1136G058 Amborella trichopoda HOM05D005238 ORTHO05D006337 1.1e-09 68.2 148 35.1
CANSAT80G2747 Cannabis sativa HOM05D005238 ORTHO05D006337 1.1e-09 68.2 137 35.0
Peaxi162Scf00018g00105 Petunia axillaris HOM05D005238 ORTHO05D006337 1.5e-09 67.8 214 33.2
TWI39G0564 Tripterygium wilfordii HOM05D005238 ORTHO05D006337 1.5e-09 67.8 136 36.0
CSS0017399 Camellia sinensis var. sinensis HOM05D005238 ORTHO05D006337 2.0e-09 67.4 208 36.1
Cpa.g.sc10.47 Carica papaya HOM05D005238 ORTHO05D006337 2.0e-09 67.4 144 36.8
Gohir.D01G026800 Gossypium hirsutum HOM05D005238 ORTHO05D006337 2.0e-09 67.4 138 34.1
AT1G16610 Arabidopsis thaliana HOM05D005238 ORTHO05D006337 2.6e-09 67.0 136 37.5
arahy.Tifrunner.gnm1.ann1.K2PXHZ Arachis hypogaea HOM05D005238 ORTHO05D006337 2.6e-09 67.0 115 40.0
C05p14890 Brassica napus HOM05D005238 ORTHO05D006337 2.6e-09 67.0 128 39.1
BraA08t35057Z Brassica rapa HOM05D000001 ORTHO05D000003 2.6e-09 67.0 223 33.2
CiPaw.12G006900 Carya illinoinensis HOM05D005238 ORTHO05D006337 2.6e-09 67.0 105 41.0
FAN21G1113 Fragaria x ananassa HOM05D005238 ORTHO05D006337 2.6e-09 67.0 201 35.3
HanXRQChr03g0071621 Helianthus annuus HOM05D005238 ORTHO05D006337 2.6e-09 67.0 146 36.3
HPP92_011420 Vanilla planifolia HOM05D005238 ORTHO05D006337 2.6e-09 67.0 130 39.2
Haze_24974 Corylus avellana HOM05D005238 ORTHO05D006337 3.3e-09 66.6 136 36.8
CsaV3_4G031880 Cucumis sativus L. HOM05D005238 ORTHO05D006337 3.3e-09 66.6 105 38.1
ECA240G2789 Erigeron canadensis HOM05D005238 ORTHO05D006337 3.3e-09 66.6 145 37.9
Nitab4.5_0008429g0030 Nicotiana tabacum HOM05D005238 ORTHO05D006337 3.3e-09 66.6 124 36.3
Lj3g0001441 Lotus japonicus HOM05D005238 ORTHO05D006337 4.4e-09 66.2 126 38.9
SGA_v2.0_scaffold186G40218 Striga asiatica HOM05D005238 ORTHO05D006337 4.4e-09 66.2 127 38.6
MSTRG.7059 Avicennia marina HOM05D005238 ORTHO05D006337 5.7e-09 65.9 195 30.3
Eucgr.F03179 Eucalyptus grandis HOM05D005238 ORTHO05D006337 5.7e-09 65.9 137 36.5
Manes.14G016200 Manihot esculenta HOM05D005238 ORTHO05D006337 5.7e-09 65.9 128 38.3
Sp1g14750 Schrenkiella parvula HOM05D005238 ORTHO05D006337 5.7e-09 65.9 138 37.0
Thecc.07G152800 Theobroma cacao HOM05D005238 ORTHO05D006337 5.7e-09 65.9 172 33.1
arahy.Tifrunner.gnm1.ann1.7NR7Q4 Arachis hypogaea HOM05D005238 ORTHO05D006337 7.4e-09 65.5 138 37.7
MBI16_g40051_MAGBIO Magnolia biondii HOM05D005238 ORTHO05D006337 7.4e-09 65.5 115 40.0
THA.LOC104813616 Tarenaya hassleriana HOM05D005238 ORTHO05D006337 7.4e-09 65.5 115 39.1
Duzib187G0607 Durio zibethinus HOM05D005238 ORTHO05D006337 9.7e-09 65.1 139 36.0
FAN16G2086 Fragaria x ananassa HOM05D005238 ORTHO05D006337 9.7e-09 65.1 208 34.6
TWI38G1616 Tripterygium wilfordii HOM05D005238 ORTHO05D006337 9.7e-09 65.1 129 38.0
Gorai.002G036200 Gossypium raimondii HOM05D005238 ORTHO05D006337 1.3e-08 64.7 121 38.0
Hma1.2p1_0637F.1_g193540 Hydrangea macrophylla HOM05D005238 ORTHO05D006337 1.3e-08 64.7 219 31.1
ClCG11G016430 Citrullus lanatus HOM05D005238 ORTHO05D006337 1.7e-08 64.3 100 38.0
PSO170G6647 Papaver somniferum HOM05D005238 ORTHO05D006337 1.7e-08 64.3 114 40.4
AUR62043127 Chenopodium quinoa HOM05D005238 ORTHO05D006337 2.2e-08 63.9 133 34.6
Gohir.A01G039100 Gossypium hirsutum HOM05D005238 ORTHO05D006337 2.2e-08 63.9 99 37.4
PSO782G5275 Papaver somniferum HOM05D005238 ORTHO05D006337 2.2e-08 63.9 114 40.4
BolC8t49374H Brassica oleracea HOM05D005238 ORTHO05D006337 2.8e-08 63.5 181 33.7
Potri.011G143100 Populus trichocarpa HOM05D005238 ORTHO05D006337 2.8e-08 63.5 214 30.8
GSVIVG01020424001 Vitis vinifera HOM05D005238 ORTHO05D006337 2.8e-08 63.5 221 29.4
CDE12G0696 Ceratophyllum demersum HOM05D005238 ORTHO05D006337 3.7e-08 63.2 93 44.1
Dinv19619 Davidia involucrata HOM05D005238 ORTHO05D006337 3.7e-08 63.2 142 33.8
Gohir.D01G026750 Gossypium hirsutum HOM05D005238 ORTHO05D006337 3.7e-08 63.2 178 30.9
Lj8A188G51 Lonicera japonica HOM05D005238 ORTHO05D006337 3.7e-08 63.2 137 35.8
Prupe.4G139800 Prunus persica HOM05D005238 ORTHO05D006337 3.7e-08 63.2 115 37.4
BcaB03g13039 Brassica carinata HOM05D000001 ORTHO05D000003 4.8e-08 62.8 162 32.7
A06p12590 Brassica napus HOM05D005238 ORTHO05D006337 4.8e-08 62.8 130 36.2
BraA06t24421Z Brassica rapa HOM05D005238 ORTHO05D006337 4.8e-08 62.8 130 36.2
PGR031G1019 Punica granatum HOM05D005238 ORTHO05D006337 4.8e-08 62.8 94 40.4
CDE01G0718 Ceratophyllum demersum HOM05D005238 ORTHO05D006337 8.2e-08 62.0 136 36.8
Psat1g011080 Pisum sativum HOM05D005238 ORTHO05D006337 8.2e-08 62.0 209 31.6
C08p17490 Brassica napus HOM05D005238 ORTHO05D006337 1.1e-07 61.6 140 35.7
Cfa002698 Carpinus fangiana HOM05D005238 ORTHO05D006337 1.1e-07 61.6 136 36.0
Thhalv10007778m.g Eutrema salsugineum HOM05D005238 ORTHO05D006337 1.1e-07 61.6 97 40.2
MD10G1202400 Malus domestica HOM05D005238 ORTHO05D006337 1.1e-07 61.6 139 36.0
SEGI_03141 Sequoiadendron giganteum HOM05D005238 ORTHO05D006337 1.1e-07 61.6 144 34.0
AL1G28770 Arabidopsis lyrata HOM05D005238 ORTHO05D006337 1.8e-07 60.8 111 36.0
BcaB07g32526 Brassica carinata HOM05D002708 ORTHO05D006337 1.8e-07 60.8 111 36.0
Os01g0959000 Oryza sativa ssp. japonica HOM05D005238 ORTHO05D006337 1.8e-07 60.8 107 39.3
Lsat_1_v5_gn_7_65541 Lactuca sativa HOM05D005238 ORTHO05D006337 2.4e-07 60.5 100 39.0
Mapoly0011s0143 Marchantia polymorpha HOM05D005238 ORTHO05D006337 2.4e-07 60.5 129 33.3
HPP92_027055 Vanilla planifolia HOM05D005238 ORTHO05D006337 2.4e-07 60.5 158 32.3
Actinidia07350 Actinidia chinensis HOM05D005238 ORTHO05D006337 3.1e-07 60.1 98 37.8
Rhsim06G0238800 Rhododendron simsii HOM05D005238 ORTHO05D006337 3.1e-07 60.1 138 31.9
Carub.0001s1636 Capsella rubella HOM05D005238 ORTHO05D006337 4.1e-07 59.7 234 29.9
Duzib268G1788 Durio zibethinus HOM05D005238 ORTHO05D006337 4.1e-07 59.7 151 35.8
EL10Ac2g03318 Beta vulgaris HOM05D005238 ORTHO05D006337 5.3e-07 59.3 101 39.6
Aqoxy6G00105 Aquilegia oxysepala HOM05D005238 ORTHO05D006337 6.9e-07 58.9 129 35.7
Sed0003933 Sechium edule HOM05D005238 ORTHO05D006337 9.1e-07 58.5 95 38.9
Ciclev10020284m.g Citrus clementina HOM05D005238 ORTHO05D006337 1.5e-06 57.8 123 35.8
Hma1.2p1_0334F.1_g128770 Hydrangea macrophylla HOM05D005238 ORTHO05D006337 1.5e-06 57.8 130 36.2
Migut.M01557 Erythranthe guttata HOM05D005238 ORTHO05D006337 2.0e-06 57.4 267 28.1
BolC8t51981H Brassica oleracea HOM05D005238 ORTHO05D006337 2.6e-06 57.0 137 31.4
SMO271G0048 Selaginella moellendorffii HOM05D005238 ORTHO05D006337 2.6e-06 57.0 146 30.8
Pp3c12_22790 Physcomitrium patens HOM05D005238 ORTHO05D006337 3.4e-06 56.6 106 34.0
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 5.9e-06 55.8 205 32.2
Zm00001eb140450 Zea mays HOM05D005238 ORTHO05D006337 5.9e-06 55.8 113 36.3


User provided reference genes

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