Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2491 Papaver somniferum HOM05D002149 ORTHO05D002154 1.2e-79 299.7 145 100.0
PSO384G4939 Papaver somniferum HOM05D002149 ORTHO05D002154 2.4e-75 285.4 143 96.5
TAR633G2470 Trochodendron aralioides HOM05D002149 ORTHO05D002154 4.5e-37 158.3 143 53.8
Nn2g11449 Nelumbo nucifera HOM05D002149 ORTHO05D002154 4.5e-29 131.7 143 46.2
GSVIVG01033975001 Vitis vinifera HOM05D002149 ORTHO05D002154 4.9e-28 128.3 142 46.5
Dinv03586 Davidia involucrata HOM05D002149 ORTHO05D002154 1.4e-27 126.7 143 46.2
MBI14_g28266_MAGBIO Magnolia biondii HOM05D002149 ORTHO05D002154 5.5e-27 124.8 144 42.4
Hma1.2p1_0362F.1_g136100 Hydrangea macrophylla HOM05D002149 ORTHO05D002154 9.6e-24 114.0 141 44.7
Haze_20984 Corylus avellana HOM05D002149 ORTHO05D002154 1.6e-23 113.2 143 43.4
Aqoxy4G02609 Aquilegia oxysepala HOM05D002149 ORTHO05D002154 3.7e-23 112.1 145 44.1
Eucgr.K02986 Eucalyptus grandis HOM05D002149 ORTHO05D002154 4.8e-23 111.7 143 38.5
CsaV3_4G026160 Cucumis sativus L. HOM05D002149 ORTHO05D002154 2.4e-22 109.4 142 41.5
Cfa017220 Carpinus fangiana HOM05D002149 ORTHO05D002154 4.0e-22 108.6 141 41.8
CiPaw.09G208000 Carya illinoinensis HOM05D002149 ORTHO05D002154 1.2e-21 107.1 126 43.7
MELO3C003243.2 Cucumis melo HOM05D002149 ORTHO05D002154 1.5e-21 106.7 142 40.8
Lj2A76T82 Lonicera japonica HOM05D002149 ORTHO05D002154 2.6e-21 105.9 174 36.2
Haze_20988 Corylus avellana HOM05D002149 ORTHO05D002154 1.0e-20 104.0 143 42.0
Glyma.18G199400 Glycine max HOM05D002149 ORTHO05D002154 6.5e-20 101.3 136 39.0
arahy.Tifrunner.gnm1.ann1.ECTA9H Arachis hypogaea HOM05D002149 ORTHO05D002154 3.2e-19 99.0 122 41.0
RcHm_v2.0_Chr3g0463301 Rosa chinensis HOM05D002149 ORTHO05D002154 3.2e-19 99.0 141 41.1
Glyma.07G148100 Glycine max HOM05D002149 ORTHO05D002154 4.2e-19 98.6 136 38.2
COL.COLO4_14550 Corchorus olitorius HOM05D002149 ORTHO05D002154 5.5e-19 98.2 155 39.4
Haze_20983 Corylus avellana HOM05D002149 ORTHO05D002154 5.5e-19 98.2 97 50.5
Ciclev10011105m.g Citrus clementina HOM05D002149 ORTHO05D002154 1.6e-18 96.7 143 39.2
Lj1g0021513 Lotus japonicus HOM05D002149 ORTHO05D002154 2.7e-18 95.9 147 40.1
MD04G1150700 Malus domestica HOM05D002149 ORTHO05D002154 2.7e-18 95.9 143 38.5
Manes.09G104300 Manihot esculenta HOM05D002149 ORTHO05D002154 6.0e-18 94.7 98 48.0
CSS0002582 Camellia sinensis var. sinensis HOM05D002149 ORTHO05D002154 1.3e-17 93.6 143 39.2
Thecc.05G017900 Theobroma cacao HOM05D002149 ORTHO05D002154 1.3e-17 93.6 158 37.3
MD12G1164700 Malus domestica HOM05D002149 ORTHO05D002154 3.0e-17 92.4 143 39.2
Potri.016G114600 Populus trichocarpa HOM05D002149 ORTHO05D002154 3.0e-17 92.4 104 46.2
Prupe.6G275400 Prunus persica HOM05D002149 ORTHO05D002154 3.0e-17 92.4 143 37.1
Nitab4.5_0008420g0010 Nicotiana tabacum HOM05D002149 ORTHO05D002154 3.9e-17 92.0 144 38.9
Actinidia20727 Actinidia chinensis HOM05D002149 ORTHO05D002154 5.1e-17 91.7 143 39.2
Cc06_g01480 Coffea canephora HOM05D002149 ORTHO05D002154 5.1e-17 91.7 143 37.1
Eucgr.K02984 Eucalyptus grandis HOM05D002149 ORTHO05D002154 5.1e-17 91.7 144 36.8
FAN05G3485 Fragaria x ananassa HOM05D002149 ORTHO05D002154 6.7e-17 91.3 143 39.9
Phvul.008G105400 Phaseolus vulgaris HOM05D002149 ORTHO05D002154 1.1e-16 90.5 137 35.8
Cpa.g.sc163.16 Carica papaya HOM05D002149 ORTHO05D002154 1.5e-16 90.1 141 39.0
Nitab4.5_0000335g0130 Nicotiana tabacum HOM05D002149 ORTHO05D002154 1.5e-16 90.1 145 38.6
TWI53G0360 Tripterygium wilfordii HOM05D002149 ORTHO05D002154 1.5e-16 90.1 140 36.4
Duzib106G1266 Durio zibethinus HOM05D002149 ORTHO05D002154 2.5e-16 89.4 161 36.6
Sabra06G0076100 Salix brachista HOM05D002149 ORTHO05D002154 5.7e-16 88.2 104 41.3
CDE07G1093 Ceratophyllum demersum HOM05D002149 ORTHO05D002154 1.3e-15 87.0 151 36.4
Atru.chr8.2221 Acer truncatum HOM05D002149 ORTHO05D002154 2.2e-15 86.3 143 37.1
Duzib128G0431 Durio zibethinus HOM05D002149 ORTHO05D002154 2.8e-15 85.9 155 34.2
VMungo1383G2015 Vigna mungo HOM05D002149 ORTHO05D002154 2.8e-15 85.9 122 36.9
Peaxi162Scf00141g00338 Petunia axillaris HOM05D002149 ORTHO05D002154 4.8e-15 85.1 142 38.0
Sc22g0002430 Simmondsia chinensis HOM05D002149 ORTHO05D002154 4.8e-15 85.1 143 35.0
Psat3g130000 Pisum sativum HOM05D002149 ORTHO05D002154 6.3e-15 84.7 126 36.5
FAN02G0732 Fragaria x ananassa HOM05D002149 ORTHO05D002154 1.4e-14 83.6 143 37.8
Gohir.A01G228100 Gossypium hirsutum HOM05D002149 ORTHO05D002154 1.4e-14 83.6 160 36.2
Duzib093G1506 Durio zibethinus HOM05D002149 ORTHO05D002154 4.1e-14 82.0 156 38.5
Ca_07626_v3 Cicer arietinum L. HOM05D002149 ORTHO05D002154 5.3e-14 81.6 124 37.1
FvH4_6g11640 Fragaria vesca HOM05D002149 ORTHO05D002154 5.3e-14 81.6 143 37.8
FAN14G2165 Fragaria x ananassa HOM05D002149 ORTHO05D002154 5.3e-14 81.6 143 37.8
CANSAT35G0407 Cannabis sativa HOM05D002149 ORTHO05D002154 6.9e-14 81.3 144 34.0
FAN09G2687 Fragaria x ananassa HOM05D002149 ORTHO05D002154 6.9e-14 81.3 144 37.5
Potri.006G099302 Populus trichocarpa HOM05D002149 ORTHO05D002154 6.9e-14 81.3 104 39.4
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 1.2e-13 80.5 128 41.4
TPR.G8126 Trifolium pratense HOM05D002149 ORTHO05D002154 1.2e-13 80.5 122 36.1
FAN05G0150 Fragaria x ananassa HOM05D002149 ORTHO05D002154 1.5e-13 80.1 92 50.0
FAN14G4062 Fragaria x ananassa HOM05D002149 ORTHO05D002154 1.5e-13 80.1 143 37.1
Lalb_Chr19g0124711 Lupinus albus HOM05D002149 ORTHO05D002154 2.6e-13 79.3 127 33.1
FAN16G1429 Fragaria x ananassa HOM05D002149 ORTHO05D002154 4.5e-13 78.6 166 37.3
FvH4_3g04830 Fragaria vesca HOM05D002149 ORTHO05D002154 7.7e-13 77.8 166 37.3
Migut.J00183 Erythranthe guttata HOM05D002149 ORTHO05D002154 1.3e-12 77.0 90 42.2
CAN.G772.2 Capsicum annuum HOM05D002149 ORTHO05D002154 1.7e-12 76.6 143 34.3
AUR62043096 Chenopodium quinoa HOM05D002149 ORTHO05D002154 1.7e-12 76.6 98 44.9
FAN11G2695 Fragaria x ananassa HOM05D002149 ORTHO05D002154 1.7e-12 76.6 166 36.7
FAN25G0477 Fragaria x ananassa HOM05D002149 ORTHO05D002154 3.8e-12 75.5 166 36.7
Solyc09g014440.4 Solanum lycopersicum HOM05D002149 ORTHO05D002154 3.8e-12 75.5 143 35.0
MSTRG.5584 Avicennia marina HOM05D002149 ORTHO05D002154 6.5e-12 74.7 101 36.6
EL10Ac8g19498 Beta vulgaris HOM05D002149 ORTHO05D002154 1.1e-11 73.9 108 43.5
FAN21G1933 Fragaria x ananassa HOM05D002149 ORTHO05D002154 1.1e-11 73.9 163 35.6
Medtr7g067540 Medicago truncatula HOM05D002149 ORTHO05D002154 1.1e-11 73.9 77 48.1
Sopen09g007250 Solanum pennellii HOM05D002149 ORTHO05D002154 1.1e-11 73.9 128 37.5
Oeu055168.1 Olea europaea HOM05D002149 ORTHO05D002154 1.4e-11 73.6 92 38.0
DCAR_028839 Daucus carota HOM05D002149 ORTHO05D002154 1.9e-11 73.2 129 39.5
RcHm_v2.0_Chr5g0007991 Rosa chinensis HOM05D002149 ORTHO05D002154 2.5e-11 72.8 166 36.7
Hund22325 Selenicereus undatus HOM05D002149 ORTHO05D002154 2.5e-11 72.8 145 35.9
Sed0006268 Sechium edule HOM05D002149 ORTHO05D002154 4.2e-11 72.0 141 33.3
THA.LOC104816651 Tarenaya hassleriana HOM05D002149 ORTHO05D002154 4.2e-11 72.0 142 33.8
TPR.G31896 Trifolium pratense HOM05D002149 ORTHO05D002154 4.2e-11 72.0 132 34.1
Cfa017219 Carpinus fangiana HOM05D002149 ORTHO05D002154 7.2e-11 71.2 128 35.2
MSTRG.19018 Avicennia marina HOM05D002149 ORTHO05D002154 1.6e-10 70.1 96 36.5
ATR0680G135 Amborella trichopoda HOM05D002149 ORTHO05D002154 6.1e-10 68.2 167 34.7
Aa31LG1G22890 Aethionema arabicum HOM05D002149 ORTHO05D002154 7.9e-10 67.8 144 31.9
TWI63G0661 Tripterygium wilfordii HOM05D002149 ORTHO05D002154 1.0e-09 67.4 163 32.5
ECA247G2207 Erigeron canadensis HOM05D002149 ORTHO05D002154 1.4e-09 67.0 151 29.8
Eucgr.K02985 Eucalyptus grandis HOM05D002149 ORTHO05D002154 1.4e-09 67.0 89 37.1
Lj4g0027648 Lotus japonicus HOM05D002149 ORTHO05D002154 1.4e-09 67.0 159 32.7
Oeu064510.1 Olea europaea HOM05D002149 ORTHO05D002154 2.3e-09 66.2 143 30.8
Sabra11G0033900 Salix brachista HOM05D002149 ORTHO05D002154 2.3e-09 66.2 171 32.7
Rhsim02G0127000 Rhododendron simsii HOM05D002149 ORTHO05D002154 3.9e-09 65.5 165 33.3
TWI38G1276 Tripterygium wilfordii HOM05D002149 ORTHO05D002154 3.9e-09 65.5 163 30.1
Thhalv10012754m.g Eutrema salsugineum HOM05D002149 ORTHO05D002154 5.1e-09 65.1 143 33.6
DCAR_028109 Daucus carota HOM05D002149 ORTHO05D002154 6.7e-09 64.7 162 30.9
unitig_22.g6591 Utricularia gibba HOM05D002149 ORTHO05D002154 6.7e-09 64.7 100 37.0
PGR004G2712 Punica granatum HOM05D002149 ORTHO05D002154 8.8e-09 64.3 124 34.7
Dinv40535 Davidia involucrata HOM05D002149 ORTHO05D002154 1.1e-08 63.9 162 32.1
CANSAT35G1545 Cannabis sativa HOM05D002149 ORTHO05D002154 2.0e-08 63.2 150 30.0
CiPaw.09G057100 Carya illinoinensis HOM05D002149 ORTHO05D002154 2.0e-08 63.2 162 30.2
CiPaw.10G046800 Carya illinoinensis HOM05D002149 ORTHO05D002154 2.0e-08 63.2 161 31.7
Gorai.002G264300 Gossypium raimondii HOM05D002149 ORTHO05D002154 2.0e-08 63.2 160 31.2
MD05G1316500 Malus domestica HOM05D002149 ORTHO05D002154 2.0e-08 63.2 165 32.1
Manes.16G025300 Manihot esculenta HOM05D002149 ORTHO05D002154 2.0e-08 63.2 161 29.2
QL05p039486 Quercus lobata HOM05D002149 ORTHO05D002154 2.0e-08 63.2 158 30.4
CsaV3_6G049980 Cucumis sativus L. HOM05D002149 ORTHO05D002154 2.5e-08 62.8 154 32.5
Eucgr.E03350 Eucalyptus grandis HOM05D002149 ORTHO05D002154 2.5e-08 62.8 161 29.8
Actinidia05370 Actinidia chinensis HOM05D002149 ORTHO05D002154 3.3e-08 62.4 119 34.5
Dinv07534 Davidia involucrata HOM05D002149 ORTHO05D002154 4.3e-08 62.0 163 30.7
SGA_v2.0_scaffold85G26748 Striga asiatica HOM05D002149 ORTHO05D002154 4.3e-08 62.0 91 38.5
Glyma.13G181700 Glycine max HOM05D002149 ORTHO05D002154 5.7e-08 61.6 163 30.7
Manes.17G043100 Manihot esculenta HOM05D002149 ORTHO05D002154 7.4e-08 61.2 164 31.7
COL.COLO4_31506 Corchorus olitorius HOM05D002149 ORTHO05D002154 9.7e-08 60.8 162 31.5
Glyma.07G194800 Glycine max HOM05D002149 ORTHO05D002154 9.7e-08 60.8 163 30.1
SalBow5G3383 Salvia bowleyana HOM05D002149 ORTHO05D002154 9.7e-08 60.8 105 35.2
TAR627G0551 Trochodendron aralioides HOM05D002149 ORTHO05D002154 9.7e-08 60.8 164 31.1
Actinidia05613 Actinidia chinensis HOM05D002149 ORTHO05D002154 1.3e-07 60.5 162 31.5
HanXRQChr15g0464031 Helianthus annuus HOM05D002149 ORTHO05D002154 1.3e-07 60.5 86 39.5
PGR042G1575 Punica granatum HOM05D002149 ORTHO05D002154 1.3e-07 60.5 157 33.1
vmacro15893 Vaccinium macrocarpon HOM05D002149 ORTHO05D002154 1.3e-07 60.5 164 31.1
A03p00370 Brassica napus HOM05D002149 ORTHO05D002154 1.7e-07 60.1 144 31.9
BraA03t09428Z Brassica rapa HOM05D002149 ORTHO05D002154 1.7e-07 60.1 144 31.9
Cpa.g.sc27.71 Carica papaya HOM05D002149 ORTHO05D002154 1.7e-07 60.1 164 29.9
Lalb_Chr16g0383611 Lupinus albus HOM05D002149 ORTHO05D002154 1.7e-07 60.1 165 30.3
arahy.Tifrunner.gnm1.ann1.9SSZ5T Arachis hypogaea HOM05D002149 ORTHO05D002154 2.2e-07 59.7 165 33.3
arahy.Tifrunner.gnm1.ann1.55XWXX Arachis hypogaea HOM05D002149 ORTHO05D002154 2.8e-07 59.3 165 33.9
Nn1g04013 Nelumbo nucifera HOM05D002149 ORTHO05D002154 2.8e-07 59.3 156 29.5
Sp6g40600 Schrenkiella parvula HOM05D002149 ORTHO05D002154 2.8e-07 59.3 144 30.6
Thecc.06G191200 Theobroma cacao HOM05D002149 ORTHO05D002154 2.8e-07 59.3 162 30.9
ClCG01G022810 Citrullus lanatus HOM05D002149 ORTHO05D002154 3.7e-07 58.9 154 31.2
MELO3C007299.2 Cucumis melo HOM05D002149 ORTHO05D002154 3.7e-07 58.9 155 32.3
Oeu014699.1 Olea europaea HOM05D002149 ORTHO05D002154 3.7e-07 58.9 165 29.7
Sed0016039 Sechium edule HOM05D002149 ORTHO05D002154 3.7e-07 58.9 118 29.7
VMungo0251G1624 Vigna mungo HOM05D002149 ORTHO05D002154 3.7e-07 58.9 159 32.1
Zm00001eb185700 Zea mays HOM05D002149 ORTHO05D002154 3.7e-07 58.9 139 32.4
AL6G10900 Arabidopsis lyrata HOM05D002149 ORTHO05D002154 4.8e-07 58.5 144 29.2
Cfa000412 Carpinus fangiana HOM05D002149 ORTHO05D002154 4.8e-07 58.5 164 26.2
MD10G1297000 Malus domestica HOM05D002149 ORTHO05D002154 4.8e-07 58.5 161 30.4
Zm00001eb248450 Zea mays HOM05D002149 ORTHO05D002154 4.8e-07 58.5 146 30.8
FAN17G1341 Fragaria x ananassa HOM05D020766 ORTHO05D206091 6.3e-07 58.2 59 49.2
THA.LOC104806283 Tarenaya hassleriana HOM05D002149 ORTHO05D002154 6.3e-07 58.2 154 30.5
SalBow8G5259 Salvia bowleyana HOM05D002149 ORTHO05D002154 8.2e-07 57.8 162 28.4
Sed0024319 Sechium edule HOM05D002149 ORTHO05D002154 8.2e-07 57.8 152 31.6
BcaNung06531 Brassica carinata HOM05D002149 ORTHO05D002154 1.1e-06 57.4 144 31.2
C03p00530 Brassica napus HOM05D002149 ORTHO05D002154 1.1e-06 57.4 144 31.2
BolC3t12619H Brassica oleracea HOM05D002149 ORTHO05D002154 1.1e-06 57.4 144 31.2
Duzib160G0447 Durio zibethinus HOM05D002149 ORTHO05D002154 1.1e-06 57.4 163 30.7
Gohir.A06G209900 Gossypium hirsutum HOM05D002149 ORTHO05D002154 1.1e-06 57.4 156 29.5
Lsat_1_v5_gn_9_33761 Lactuca sativa HOM05D002149 ORTHO05D002154 1.4e-06 57.0 92 34.8
ECA247G0839 Erigeron canadensis HOM05D002149 ORTHO05D002154 1.8e-06 56.6 84 36.9
HanXRQChr10g0301091 Helianthus annuus HOM05D002149 ORTHO05D002154 1.8e-06 56.6 86 38.4
Ah.14g089300 Amaranthus hybridus HOM05D002149 ORTHO05D002154 2.4e-06 56.2 151 31.1
AL7G32300 Arabidopsis lyrata HOM05D002149 ORTHO05D002154 2.4e-06 56.2 162 30.9
Gohir.D06G211100 Gossypium hirsutum HOM05D002149 ORTHO05D002154 2.4e-06 56.2 156 32.1
Atru.chr10.1943 Acer truncatum HOM05D002149 ORTHO05D002154 4.1e-06 55.5 164 31.7
AT5G01270 Arabidopsis thaliana HOM05D002149 ORTHO05D002154 4.1e-06 55.5 144 29.2
Cc02_g13040 Coffea canephora HOM05D002149 ORTHO05D002154 4.1e-06 55.5 167 31.1
Gorai.010G255100 Gossypium raimondii HOM05D002149 ORTHO05D002154 4.1e-06 55.5 156 29.5
Lalb_Chr05g0218371 Lupinus albus HOM05D002149 ORTHO05D002154 4.1e-06 55.5 166 30.1
Phvul.002G226900 Phaseolus vulgaris HOM05D002149 ORTHO05D002154 4.1e-06 55.5 164 29.9
Ciclev10014168m.g Citrus clementina HOM05D002149 ORTHO05D002154 5.3e-06 55.1 165 28.5
Gohir.D10G024600 Gossypium hirsutum HOM05D002149 ORTHO05D002154 5.3e-06 55.1 161 29.2
Gorai.011G025900 Gossypium raimondii HOM05D002149 ORTHO05D002154 5.3e-06 55.1 161 29.2
Prupe.4G043500 Prunus persica HOM05D002149 ORTHO05D002154 5.3e-06 55.1 160 30.6
Sed0007844 Sechium edule HOM05D002149 ORTHO05D002154 5.3e-06 55.1 158 31.6
Sc17g0006300 Simmondsia chinensis HOM05D002149 ORTHO05D002154 9.1e-06 54.3 176 30.1


User provided reference genes

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