Gene: Solyc09g014440.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g014440.4
  • Transcript Identifier Solyc09g014440.4.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 6053043-6063016 : negative

Gene Family Information

  • ID HOM05D002149
  • #Genes/#Species 312/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g014440.4.1
  • uniprot A0A3Q7HZ86
  • gene_id Solyc09g014440

Descriptions

  • Description RNA polymerase II C-terminal domain phosphatase-like 2 (AHRD V3.3 *** A0A2G2YRP1_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010025
ISO
PLAZA Integrative Orthologywax biosynthetic process AT5G01270
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G01270
GO:0009734
ISO
PLAZA Integrative Orthologyauxin-activated signaling pathway AT5G01270
GO:0048589
ISO
PLAZA Integrative Orthologydevelopmental growth AT5G01270
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT5G01270
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G01270
GO:0070940
IBA
IEA
GOA Databasedephosphorylation of RNA polymerase II C-terminal domain
GO:0070940
IEA
InterProdephosphorylation of RNA polymerase II C-terminal domain

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004647
ISO
PLAZA Integrative Orthologyphosphoserine phosphatase activity AT5G01270
GO:0036424
ISO
PLAZA Integrative OrthologyL-phosphoserine phosphatase activity AT5G01270
GO:0016791
ISO
PLAZA Integrative Orthologyphosphatase activity AT5G01270
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G01270
GO:0008420
IBA
IEA
GOA DatabaseRNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0008420
IEA
InterProRNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0004722
IEA
GOA Databaseprotein serine/threonine phosphatase activity
GO:0106307
IEA
GOA Databaseprotein threonine phosphatase activity
GO:0106306
IEA
GOA Databaseprotein serine phosphatase activity
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G01270
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014720 Double-stranded RNA-binding domain
IPR004274 FCP1 homology domain
IPR036412 HAD-like superfamily
IPR039189 CTD phosphatase Fcp1
IPR023214 HAD superfamily
Mapman id Description
15.3.2.2 RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.group-I phosphatase
18.4.26.1.5 Protein modification.phosphorylation.protein aspartate phosphatase superfamily.FCP phosphatase families.subcluster H/CPL1-2 phosphatase