Gene: FAN16G1429

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN16G1429
  • Transcript Identifier FAN16G1429.1
  • Gene Type Coding gene
  • Location Fvb3-3 : 839073-845882 : positive

Gene Family Information

  • ID HOM05D002149
  • #Genes/#Species 312/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb3-3-augustus-gene-8.42.v1.0.a1
  • pacid 50534265

Descriptions

  • Description PTHR23081//PTHR23081:SF7 - RNA POLYMERASE II CTD PHOSPHATASE // RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070940
IEA
InterProdephosphorylation of RNA polymerase II C-terminal domain
GO:0009738
ISO
PLAZA Integrative Orthologyabscisic acid-activated signaling pathway AT4G21670
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT4G21670
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G21670
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT4G21670

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008420
IEA
InterProRNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0004721
ISO
PLAZA Integrative Orthologyphosphoprotein phosphatase activity AT4G21670
GO:0004647
ISO
PLAZA Integrative Orthologyphosphoserine phosphatase activity AT4G21670
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G21670
GO:0016791
ISO
PLAZA Integrative Orthologyphosphatase activity AT4G21670
GO:0036424
ISO
PLAZA Integrative OrthologyL-phosphoserine phosphatase activity AT4G21670

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G21670

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039189 CTD phosphatase Fcp1
IPR036412 HAD-like superfamily
IPR014720 Double-stranded RNA-binding domain
IPR023214 HAD superfamily
IPR004274 FCP1 homology domain
Mapman id Description
15.3.2.2 RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.group-I phosphatase
18.4.26.1.5 Protein modification.phosphorylation.protein aspartate phosphatase superfamily.FCP phosphatase families.subcluster H/CPL1-2 phosphatase