Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 0.0e+00 1096.6 554 100.0
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 6.0e-292 1006.9 551 93.1
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 2.8e-204 715.7 627 62.4
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 6.8e-187 657.9 583 60.2
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 3.2e-184 649.0 668 55.5
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 2.5e-181 639.4 672 53.9
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 1.9e-176 623.2 671 53.7
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 3.2e-176 622.5 661 52.5
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 2.7e-175 619.4 679 51.4
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 2.7e-175 619.4 669 51.7
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 3.0e-174 615.9 671 52.2
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 6.6e-174 614.8 684 50.0
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 1.9e-173 613.2 668 52.2
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 6.9e-171 604.7 647 52.6
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 1.2e-170 604.0 631 51.5
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 1.2e-170 604.0 662 50.6
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 1.3e-169 600.5 645 51.8
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 2.2e-169 599.7 647 51.9
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 8.4e-169 597.8 633 51.7
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 1.4e-168 597.0 667 50.1
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 2.4e-168 596.3 685 49.6
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 7.1e-168 594.7 645 51.6
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 2.1e-167 593.2 655 51.5
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 2.7e-167 592.8 658 51.5
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 4.6e-167 592.0 633 51.7
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 3.9e-166 589.0 671 49.6
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 3.9e-166 589.0 655 51.8
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 8.7e-166 587.8 686 49.0
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 3.3e-165 585.9 659 50.4
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 5.6e-165 585.1 667 51.1
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 7.4e-165 584.7 633 51.2
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.8e-163 580.1 691 48.5
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 5.3e-163 578.6 636 51.7
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 6.9e-163 578.2 670 49.0
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 1.2e-162 577.4 670 49.0
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 2.9e-161 572.8 691 48.0
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 1.6e-159 567.0 673 48.3
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 2.7e-159 566.2 678 48.4
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.7e-159 566.2 725 45.4
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 7.9e-159 564.7 657 49.5
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 7.9e-159 564.7 673 48.6
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 3.0e-158 562.8 669 47.8
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 4.3e-157 558.9 662 47.3
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 5.6e-157 558.5 711 45.1
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 2.1e-156 556.6 672 48.4
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 3.7e-156 555.8 656 48.3
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 4.0e-155 552.4 483 59.4
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 1.2e-154 550.8 730 45.5
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 1.7e-153 547.0 674 48.2
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 8.4e-153 544.7 616 49.7
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 3.2e-152 542.7 652 47.2
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 2.1e-151 540.0 666 46.4
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 6.7e-150 535.0 593 50.3
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 8.7e-150 534.6 596 51.3
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 1.5e-149 533.9 603 50.4
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 1.9e-149 533.5 835 41.2
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 3.3e-149 532.7 628 48.7
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 5.7e-149 531.9 611 48.4
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 9.7e-149 531.2 659 46.1
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 1.3e-148 530.8 680 46.6
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 1.3e-148 530.8 657 47.9
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 5.3e-147 525.4 659 46.1
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 9.0e-147 524.6 609 50.1
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 1.2e-146 524.2 661 46.7
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 3.4e-146 522.7 632 48.1
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 6.5e-145 518.5 632 47.9
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 1.6e-143 513.8 659 45.7
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.6e-143 513.8 559 50.1
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 2.7e-143 513.1 632 47.3
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 2.7e-143 513.1 632 47.3
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 2.7e-143 513.1 632 47.3
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 2.7e-143 513.1 658 44.2
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 4.6e-143 512.3 574 50.2
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 7.9e-143 511.5 607 48.4
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 3.9e-142 509.2 599 47.4
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 5.1e-142 508.8 633 47.1
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 5.1e-142 508.8 474 57.8
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 2.0e-141 506.9 572 50.5
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 5.7e-141 505.4 662 45.8
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 7.4e-141 505.0 670 43.9
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 4.5e-138 495.7 644 44.9
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 4.5e-138 495.7 601 48.8
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 2.1e-135 486.9 585 48.9
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 1.5e-133 480.7 653 43.3
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 2.6e-133 479.9 614 45.6
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 2.6e-130 469.9 580 46.7
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 7.7e-130 468.4 475 54.3
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 3.3e-125 453.0 551 48.5
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 5.0e-121 439.1 585 44.4
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 2.1e-119 433.7 553 43.6
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 1.2e-117 427.9 649 42.5
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 3.6e-111 406.4 654 39.0
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 4.8e-108 396.0 514 47.5
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 6.3e-108 395.6 639 38.8
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 1.4e-107 394.4 527 46.5
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 1.1e-99 368.2 474 46.4
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 2.0e-98 364.0 465 45.8
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 1.5e-88 331.3 504 41.5
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 5.6e-88 329.3 539 40.3
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 4.7e-87 326.2 222 72.5
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 4.7e-79 299.7 226 63.7
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 6.2e-79 299.3 548 37.6
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 6.8e-78 295.8 744 33.6
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 1.0e-73 282.0 446 41.9
vmacro13722 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 3.0e-73 280.4 212 69.3
FAN10G4268 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.9e-68 263.8 264 55.7
Psat5g213680 Pisum sativum HOM05D004944 ORTHO05D005989 3.2e-67 260.4 444 39.2
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 1.6e-63 248.1 299 43.5
Peaxi162Scf00309g00015 Petunia axillaris HOM05D004944 ORTHO05D005989 1.6e-63 248.1 214 62.1
Sc10g0004230 Simmondsia chinensis HOM05D004944 ORTHO05D005989 3.4e-61 240.4 446 36.3
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 5.4e-59 233.0 169 67.5
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 1.1e-54 218.8 167 62.9
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 1.7e-52 211.5 161 64.0
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 1.8e-49 201.4 135 73.3
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 2.5e-48 197.6 144 67.4
CSS0031841 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 3.4e-45 187.2 182 53.8
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 2.9e-44 184.1 164 58.5
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 3.2e-43 180.6 171 51.5
FAN01G1245 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.1e-40 172.2 150 62.0
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 9.6e-40 169.1 141 58.2
ATR0721G017 Amborella trichopoda HOM05D004944 ORTHO05D005989 4.8e-39 166.8 213 46.9
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 6.2e-39 166.4 175 50.9
BcaNung04417 Brassica carinata HOM05D000343 ORTHO05D003187 1.5e-37 161.8 136 59.6
Ca_04546_v3 Cicer arietinum L. HOM05D004944 ORTHO05D005989 2.0e-37 161.4 306 38.2
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 8.7e-33 146.0 144 53.5
MCO01G407 Micromonas commoda HOM05D004944 ORTHO05D005989 1.9e-32 144.8 415 29.6
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 3.3e-32 144.1 250 35.2
Sp5g22360 Schrenkiella parvula HOM05D004944 ORTHO05D005989 1.6e-31 141.7 133 54.9
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 2.4e-30 137.9 104 63.5
Lj9A645G77 Lonicera japonica HOM05D004944 ORTHO05D005989 6.9e-30 136.3 118 61.0
SHI03969 Sapria himalayana HOM05D004944 ORTHO05D005989 5.5e-27 126.7 163 43.6
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 1.2e-26 125.6 448 27.0
Lj9A645G78 Lonicera japonica HOM05D004944 ORTHO05D005989 3.6e-26 124.0 296 34.5
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 1.4e-25 122.1 145 49.0
Prupe.2G099800 Prunus persica HOM05D004944 ORTHO05D005989 2.8e-23 114.4 177 40.7
Cre12.g555050 Chlamydomonas reinhardtii HOM05D004944 ORTHO05D005989 8.5e-20 102.8 182 33.0
RcHm_v2.0_Chr4g0391951 Rosa chinensis HOM05D004944 ORTHO05D005989 2.7e-18 97.8 94 55.3
CSS0024385 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.1e-16 92.4 91 53.8
Psat5g213600 Pisum sativum HOM05D004944 ORTHO05D005989 4.1e-14 84.0 144 39.6
Lj9A645G79 Lonicera japonica HOM05D004944 ORTHO05D005989 5.9e-13 80.1 55 67.3
SHI03976 Sapria himalayana HOM05D004944 ORTHO05D005989 1.7e-12 78.6 55 61.8
Peaxi162Scf00309g00011 Petunia axillaris HOM05D004944 ORTHO05D005989 8.5e-12 76.3 53 67.9
SHI03965 Sapria himalayana HOM05D004944 ORTHO05D005989 2.4e-06 58.2 67 49.3


User provided reference genes

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