Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0570 Papaver somniferum HOM05D005824 ORTHO05D007029 0.0e+00 1225.7 629 100.0
PSO339G3868 Papaver somniferum HOM05D005824 ORTHO05D007029 0.0e+00 1160.2 630 94.9
PSO017G5895 Papaver somniferum HOM05D005824 ORTHO05D007029 1.3e-295 1019.2 629 85.1
PSO063G2449 Papaver somniferum HOM05D005824 ORTHO05D007029 2.9e-282 974.9 631 81.6
TAR362G0448 Trochodendron aralioides HOM05D005824 ORTHO05D007029 1.1e-188 664.1 669 57.5
QL07p026733 Quercus lobata HOM05D005824 ORTHO05D007029 1.3e-186 657.1 669 56.2
CiPaw.10G020000 Carya illinoinensis HOM05D005824 ORTHO05D007029 5.0e-186 655.2 671 55.6
GSVIVG01031305001 Vitis vinifera HOM05D005824 ORTHO05D007029 6.2e-184 648.3 666 54.8
Aqoxy2G02580 Aquilegia oxysepala HOM05D005824 ORTHO05D007029 7.5e-182 641.3 663 54.9
CSS0029355 Camellia sinensis var. sinensis HOM05D005824 ORTHO05D007029 1.4e-180 637.1 669 54.7
Dinv24497 Davidia involucrata HOM05D005824 ORTHO05D007029 4.6e-179 632.1 667 54.9
Nn2g14227 Nelumbo nucifera HOM05D005824 ORTHO05D007029 7.3e-177 624.8 660 55.0
Thecc.09G352900 Theobroma cacao HOM05D005824 ORTHO05D007029 3.1e-175 619.4 696 51.3
Cfa020078 Carpinus fangiana HOM05D005824 ORTHO05D007029 4.1e-172 609.0 672 54.3
Gohir.A03G155800 Gossypium hirsutum HOM05D005824 ORTHO05D007029 3.0e-170 602.8 697 49.9
Rhsim11G0099700 Rhododendron simsii HOM05D005824 ORTHO05D007029 3.9e-170 602.4 656 54.0
Nitab4.5_0009690g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.9e-169 600.1 670 52.1
Sopen01g044470 Solanum pennellii HOM05D005824 ORTHO05D007029 2.5e-169 599.7 670 52.7
Gorai.005G200700 Gossypium raimondii HOM05D005824 ORTHO05D007029 3.3e-169 599.4 710 49.9
Oeu061927.1 Olea europaea HOM05D005824 ORTHO05D007029 3.3e-169 599.4 708 50.4
arahy.Tifrunner.gnm1.ann1.S86EGP Arachis hypogaea HOM05D005824 ORTHO05D007029 2.1e-168 596.7 720 49.2
Lj3g0001001 Lotus japonicus HOM05D005824 ORTHO05D007029 2.1e-168 596.7 717 50.2
Lalb_Chr02g0154321 Lupinus albus HOM05D005824 ORTHO05D007029 2.1e-168 596.7 718 49.9
Manes.06G027100 Manihot esculenta HOM05D005824 ORTHO05D007029 1.1e-167 594.3 670 53.4
PGSC0003DMG400018251 Solanum tuberosum HOM05D005824 ORTHO05D007029 1.1e-167 594.3 671 51.9
Cpa.g.sc48.209 Carica papaya HOM05D005824 ORTHO05D007029 1.4e-167 594.0 669 51.9
VMungo0720G2244 Vigna mungo HOM05D005824 ORTHO05D007029 2.3e-167 593.2 708 50.1
SalBow7G3942 Salvia bowleyana HOM05D005824 ORTHO05D007029 5.2e-167 592.0 642 52.5
arahy.Tifrunner.gnm1.ann1.E5V6X9 Arachis hypogaea HOM05D005824 ORTHO05D007029 8.9e-167 591.3 720 48.9
Lj5g0026124 Lotus japonicus HOM05D005824 ORTHO05D007029 5.8e-166 588.6 718 50.1
Potri.015G010900 Populus trichocarpa HOM05D005824 ORTHO05D007029 9.9e-166 587.8 719 48.0
CAN.G1374.10 Capsicum annuum HOM05D005824 ORTHO05D007029 1.7e-165 587.0 672 51.5
Sabra15G0009000 Salix brachista HOM05D005824 ORTHO05D007029 2.2e-165 586.6 735 47.3
Atru.chr12.1601 Acer truncatum HOM05D005824 ORTHO05D007029 6.4e-165 585.1 701 49.8
Lj5A322T66 Lonicera japonica HOM05D005824 ORTHO05D007029 3.2e-164 582.8 633 54.7
TPR.G21237 Trifolium pratense HOM05D005824 ORTHO05D007029 5.4e-164 582.0 719 49.9
MSTRG.15631 Avicennia marina HOM05D005824 ORTHO05D007029 4.6e-163 578.9 660 51.2
Migut.B00860 Erythranthe guttata HOM05D005824 ORTHO05D007029 3.0e-162 576.2 634 51.3
Ca_11665_v3 Cicer arietinum L. HOM05D005824 ORTHO05D007029 4.3e-161 572.4 673 50.7
Medtr1g055080 Medicago truncatula HOM05D005824 ORTHO05D007029 9.6e-161 571.2 714 49.3
TPR.G12910 Trifolium pratense HOM05D005824 ORTHO05D007029 1.6e-160 570.5 712 49.2
MBI19_g32704_MAGBIO Magnolia biondii HOM05D005824 ORTHO05D007029 3.6e-160 569.3 726 48.1
Glyma.02G192500 Glycine max HOM05D005824 ORTHO05D007029 1.1e-159 567.8 718 47.5
Haze_20113 Corylus avellana HOM05D005824 ORTHO05D007029 3.1e-159 566.2 733 49.2
Cc02_g35570 Coffea canephora HOM05D005824 ORTHO05D007029 5.2e-159 565.5 769 45.1
Gohir.D02G178900 Gossypium hirsutum HOM05D005824 ORTHO05D007029 6.9e-159 565.1 710 47.7
Psat6g118640 Pisum sativum HOM05D005824 ORTHO05D007029 1.3e-157 560.8 724 47.2
ClCG07G011770 Citrullus lanatus HOM05D005824 ORTHO05D007029 2.9e-157 559.7 674 49.9
COL.COLO4_11087 Corchorus olitorius HOM05D005824 ORTHO05D007029 4.9e-157 558.9 636 49.7
Phvul.007G265900 Phaseolus vulgaris HOM05D005824 ORTHO05D007029 1.9e-156 557.0 717 47.7
Glyma.10G084300 Glycine max HOM05D005824 ORTHO05D007029 7.1e-156 555.1 716 46.8
vmacro01596 Vaccinium macrocarpon HOM05D005824 ORTHO05D007029 9.3e-156 554.7 635 52.0
MELO3C017799.2 Cucumis melo HOM05D005824 ORTHO05D007029 2.7e-155 553.1 673 49.5
Sc09g0002470 Simmondsia chinensis HOM05D005824 ORTHO05D007029 7.8e-155 551.6 721 47.9
Eucgr.B01798 Eucalyptus grandis HOM05D005824 ORTHO05D007029 5.1e-154 548.9 674 48.5
CsaV3_4G002430 Cucumis sativus L. HOM05D005824 ORTHO05D007029 3.3e-153 546.2 674 48.7
TWI38G0226 Tripterygium wilfordii HOM05D005824 ORTHO05D007029 1.6e-152 543.9 656 50.3
SGA_v2.0_scaffold33G13450 Striga asiatica HOM05D005824 ORTHO05D007029 6.2e-152 542.0 695 46.0
AUR62006798 Chenopodium quinoa HOM05D005824 ORTHO05D007029 8.1e-152 541.6 757 44.5
Prupe.6G306900 Prunus persica HOM05D005824 ORTHO05D007029 1.1e-151 541.2 700 48.0
Nitab4.5_0000185g0360 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.8e-151 540.4 669 48.7
ECA247G2466 Erigeron canadensis HOM05D005824 ORTHO05D007029 2.4e-151 540.0 640 50.0
AUR62000450 Chenopodium quinoa HOM05D005824 ORTHO05D007029 4.0e-151 539.3 764 44.6
Duzib168G0004 Durio zibethinus HOM05D005824 ORTHO05D007029 1.2e-150 537.7 635 49.6
THA.LOC104821746 Tarenaya hassleriana HOM05D005824 ORTHO05D007029 1.4e-148 530.8 731 44.5
Sed0007659 Sechium edule HOM05D005824 ORTHO05D007029 1.9e-148 530.4 673 46.5
CANSAT54G1845 Cannabis sativa HOM05D005824 ORTHO05D007029 2.4e-148 530.0 702 45.6
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 2.4e-148 530.0 658 48.6
RcHm_v2.0_Chr3g0458051 Rosa chinensis HOM05D005824 ORTHO05D007029 2.4e-148 530.0 709 47.8
EL10Ac4g09532 Beta vulgaris HOM05D005824 ORTHO05D007029 3.5e-147 526.2 726 43.4
MD12G1202100 Malus domestica HOM05D005824 ORTHO05D007029 1.3e-146 524.2 694 47.6
Hund21844 Selenicereus undatus HOM05D005824 ORTHO05D007029 2.3e-146 523.5 803 42.8
MD04G1189300 Malus domestica HOM05D005824 ORTHO05D007029 5.6e-145 518.8 699 46.8
Hma1.2p1_1243F.1_g269980 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 2.1e-144 516.9 543 56.0
FvH4_6g08180 Fragaria vesca HOM05D005824 ORTHO05D007029 1.9e-140 503.8 704 45.9
FAN14G3202 Fragaria x ananassa HOM05D005824 ORTHO05D007029 2.4e-140 503.4 705 46.1
FAN09G3961 Fragaria x ananassa HOM05D005824 ORTHO05D007029 8.7e-138 495.0 705 45.7
Carub.0006s2449 Capsella rubella HOM05D005824 ORTHO05D007029 1.5e-137 494.2 726 42.8
ATR0693G066 Amborella trichopoda HOM05D005824 ORTHO05D007029 2.8e-136 490.0 624 46.3
Peaxi162Scf00357g00429 Petunia axillaris HOM05D005824 ORTHO05D007029 3.7e-136 489.6 612 48.4
Thhalv10003721m.g Eutrema salsugineum HOM05D005824 ORTHO05D007029 1.7e-133 480.7 736 41.7
Sp2g21220 Schrenkiella parvula HOM05D005824 ORTHO05D007029 1.1e-132 478.0 740 41.6
CDE01G0540 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 5.5e-132 475.7 677 45.6
CARHR186810 Cardamine hirsuta HOM05D005824 ORTHO05D007029 8.7e-130 468.4 736 40.6
Aa31LG11G9880 Aethionema arabicum HOM05D005824 ORTHO05D007029 1.1e-129 468.0 716 42.5
AT5G26760 Arabidopsis thaliana HOM05D005824 ORTHO05D007029 4.1e-127 459.5 767 40.2
unitig_748.g6998 Utricularia gibba HOM05D005824 ORTHO05D000260 1.3e-125 454.5 650 43.2
DCAR_005271 Daucus carota HOM05D005824 ORTHO05D007029 1.7e-125 454.1 678 43.1
FAN05G5613 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.1e-124 451.4 697 43.9
AL6G38630 Arabidopsis lyrata HOM05D005824 ORTHO05D007029 1.3e-122 444.5 863 36.5
Ah.10g027060 Amaranthus hybridus HOM05D005824 ORTHO05D007029 5.7e-121 439.1 760 39.9
Nitab4.5_0002783g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 9.7e-121 438.3 641 44.8
Lsat_1_v5_gn_9_78801 Lactuca sativa HOM05D005824 ORTHO05D007029 2.0e-118 430.6 597 46.9
HanXRQChr12g0362901 Helianthus annuus HOM05D005824 ORTHO05D007029 7.9e-115 418.7 625 43.2
FAN02G4519 Fragaria x ananassa HOM05D005824 ORTHO05D007029 8.8e-114 415.2 689 42.5
BraA02t08872Z Brassica rapa HOM05D005824 ORTHO05D007029 1.7e-112 411.0 851 35.1
A02p39030 Brassica napus HOM05D005824 ORTHO05D007029 6.3e-112 409.1 849 35.3
C02p58640 Brassica napus HOM05D005824 ORTHO05D007029 9.4e-108 395.2 821 35.0
BolC2t11924H Brassica oleracea HOM05D005824 ORTHO05D007029 3.6e-107 393.3 824 35.1
Ciclev10011677m.g Citrus clementina HOM05D005824 ORTHO05D007029 2.4e-103 380.6 475 48.0
Os05g0134300 Oryza sativa ssp. japonica HOM05D005824 ORTHO05D007029 7.5e-97 359.0 726 36.6
PGR083G1123 Punica granatum HOM05D005824 ORTHO05D007029 2.8e-96 357.1 511 46.0
BcaNung06222 Brassica carinata HOM05D005824 ORTHO05D007029 6.5e-93 345.9 819 33.7
BolC7t44682H Brassica oleracea HOM05D005824 ORTHO05D007029 8.0e-91 339.0 663 37.4
C07p41490 Brassica napus HOM05D005824 ORTHO05D007029 1.8e-90 337.8 650 37.1
BcaNung03676 Brassica carinata HOM05D005824 ORTHO05D007029 5.2e-90 336.3 649 37.4
Gohir.A08G201701 Gossypium hirsutum HOM05D005824 ORTHO05D007029 6.1e-83 312.8 633 37.4
Actinidia35501 Actinidia chinensis HOM05D005824 ORTHO05D007029 2.0e-81 307.8 624 37.2
HPP92_021934 Vanilla planifolia HOM05D005824 ORTHO05D007029 2.3e-69 267.7 321 46.4
Mapoly0075s0015 Marchantia polymorpha HOM05D005824 ORTHO05D007029 2.1e-67 261.2 716 29.9
Zm00001eb354720 Zea mays HOM05D005824 ORTHO05D007029 1.2e-65 255.4 627 34.8
Solyc01g101010.4 Solanum lycopersicum HOM05D005824 ORTHO05D007029 3.7e-64 250.4 345 46.7
SMO203G0090 Selaginella moellendorffii HOM05D005824 ORTHO05D007029 7.8e-62 242.7 619 31.2
Nitab4.5_0000185g0370 Nicotiana tabacum HOM05D005824 ORTHO05D007029 8.9e-58 229.2 275 46.2
SEGI_20129 Sequoiadendron giganteum HOM05D005824 ORTHO05D007029 8.6e-53 212.6 419 37.2
AagrBONN_evm.TU.Sc2ySwM_117.2728 Anthoceros agrestis HOM05D005824 ORTHO05D007029 1.9e-52 211.5 656 27.7
Hma1.2p1_1553F.1_g290340 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 7.6e-49 199.5 614 33.4
SGA_v2.0_scaffold438G51629 Striga asiatica HOM05D005824 ORTHO05D007029 3.5e-46 190.7 196 50.0
Pp3c6_10400 Physcomitrium patens HOM05D005824 ORTHO05D007029 5.1e-45 186.8 187 47.6
CBR_g20185 Chara braunii HOM05D005824 ORTHO05D007029 8.4e-40 169.5 430 29.5
Oeu060660.1 Olea europaea HOM05D005824 ORTHO05D007029 1.4e-39 168.7 126 65.1
A06p36990 Brassica napus HOM05D005824 ORTHO05D007029 9.3e-39 166.0 176 47.7
BraA06t26625Z Brassica rapa HOM05D005824 ORTHO05D007029 9.3e-39 166.0 176 47.7
Dinv30929 Davidia involucrata HOM05D005824 ORTHO05D007029 1.8e-34 151.8 128 65.6
HPP92_021933 Vanilla planifolia HOM05D005824 ORTHO05D007029 7.1e-31 139.8 239 36.8
Cfa020079 Carpinus fangiana HOM05D005824 ORTHO05D007029 1.7e-24 118.6 82 68.3
Nitab4.5_0000185g0350 Nicotiana tabacum HOM05D005824 ORTHO05D007029 4.6e-22 110.5 96 60.4
CANSAT54G0922 Cannabis sativa HOM05D005824 ORTHO05D007029 6.0e-22 110.2 213 37.6
CDE12G0845 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 4.3e-20 104.0 70 71.4
Zm00001eb056090 Zea mays HOM05D000739 ORTHO05D007029 1.7e-16 92.0 138 40.6
Zm00001eb289330 Zea mays HOM05D005824 ORTHO05D007029 1.2e-14 85.9 113 43.4
AUR62009842 Chenopodium quinoa HOM05D003327 ORTHO05D004535 5.7e-12 77.0 168 36.9


User provided reference genes

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