Gene: vmacro01596

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro01596
  • Transcript Identifier vmacro01596-RA
  • Gene Type Coding gene
  • Location chr1_Vaccinium_macrocarpon_Stevens_v1 : 10887772-10895738 : positive

Gene Family Information

  • ID HOM05D005824
  • #Genes/#Species 134/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro01596_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to At5g26760: Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070940
IEA
InterProdephosphorylation of RNA polymerase II C-terminal domain
GO:0030154
ISO
PLAZA Integrative Orthologycell differentiation AT5G26760

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008420
IEA
InterProRNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0043175
IEA
InterProRNA polymerase core enzyme binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G26760

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G26760
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G26760

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007308 Rtr1/RPAP2 domain
IPR038534 Rtr1/RPAP2 domain superfamily
IPR039693 Rtr1/RPAP2
Mapman id Description
15.3.1.2 RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II assembly and nuclear import.nuclear import factor (RIMA)