Gene: Solyc01g101010.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g101010.4
- Transcript Identifier Solyc01g101010.4.1
- Gene Type Coding gene
- Location SL4.0ch01 : 83155033-83156262 : negative
Gene Family Information
- ID HOM05D005824
- #Genes/#Species 134/97
- Phylogenetic origin
- ID ORTHO05D007029
- #Genes/#Species 135/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc01g101010.4.1
- uniprot A0A3Q7EQK9
- gene_id Solyc01g101010
Descriptions
- Description RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein (AHRD V3.3 *-* AT5G26760.2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030154 | ISO | PLAZA Integrative Orthology | cell differentiation | AT5G26760 |
| GO:0070940 | IBA IEA | GOA Database | dephosphorylation of RNA polymerase II C-terminal domain | |
| GO:0070940 | IEA | InterPro | dephosphorylation of RNA polymerase II C-terminal domain |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004722 | IEA | GOA Database | protein serine/threonine phosphatase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G26760 |
| GO:0008420 | IBA IEA | GOA Database | RNA polymerase II CTD heptapeptide repeat phosphatase activity | |
| GO:0008420 | IEA | InterPro | RNA polymerase II CTD heptapeptide repeat phosphatase activity | |
| GO:0004721 | IEA | GOA Database | phosphoprotein phosphatase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0106307 | IEA | GOA Database | protein threonine phosphatase activity | |
| GO:0106306 | IEA | GOA Database | protein serine phosphatase activity | |
| GO:0043175 | IEA | GOA Database | RNA polymerase core enzyme binding | |
| GO:0043175 | IEA | InterPro | RNA polymerase core enzyme binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G26760 |
| GO:0005634 | IBA IEA | GOA Database | nucleus | |
| GO:0005737 | IBA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.3.1.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II assembly and nuclear import.nuclear import factor (RIMA) |