Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0229 Papaver somniferum HOM05D004151 ORTHO05D004775 3.6e-66 255.4 196 100.0
PSO339G5713 Papaver somniferum HOM05D004151 ORTHO05D004775 3.5e-61 238.8 196 97.4
PSO063G0165 Papaver somniferum HOM05D004151 ORTHO05D004775 8.1e-58 227.6 151 90.1
PSO782G4796 Papaver somniferum HOM05D004151 ORTHO05D004775 3.1e-57 225.7 149 85.9
MELO3C008801.2 Cucumis melo HOM05D004151 ORTHO05D004775 1.2e-56 223.8 148 90.5
ClCG04G005310 Citrullus lanatus HOM05D004151 ORTHO05D004775 3.8e-55 218.8 151 89.4
CsaV3_4G013280 Cucumis sativus L. HOM05D004151 ORTHO05D004775 8.4e-55 217.6 148 80.4
Sp3g02890 Schrenkiella parvula HOM05D004151 ORTHO05D004775 2.7e-53 212.6 150 84.7
Ah.06g191800 Amaranthus hybridus HOM05D004151 ORTHO05D004775 3.5e-53 212.2 150 84.0
GSVIVG01033401001 Vitis vinifera HOM05D004151 ORTHO05D004775 6.0e-53 211.5 150 78.0
Sed0025621 Sechium edule HOM05D004151 ORTHO05D004775 1.3e-52 210.3 148 82.4
HPP92_021240 Vanilla planifolia HOM05D004151 ORTHO05D004775 1.7e-52 209.9 150 85.3
Thhalv10014755m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 3.0e-52 209.1 148 75.7
RcHm_v2.0_Chr3g0490211 Rosa chinensis HOM05D004151 ORTHO05D004775 3.0e-52 209.1 150 84.0
Sed0023399 Sechium edule HOM05D004151 ORTHO05D004775 3.0e-52 209.1 150 88.0
Solyc10g078540.3 Solanum lycopersicum HOM05D004151 ORTHO05D004775 3.0e-52 209.1 153 81.0
Sopen10g029190 Solanum pennellii HOM05D004151 ORTHO05D004775 3.0e-52 209.1 153 81.0
TAR369G0512 Trochodendron aralioides HOM05D004151 ORTHO05D004775 3.0e-52 209.1 153 87.6
PGSC0003DMG400008366 Solanum tuberosum HOM05D004151 ORTHO05D004775 3.9e-52 208.8 153 81.0
FvH4_1g30320 Fragaria vesca HOM05D004151 ORTHO05D004775 5.1e-52 208.4 150 82.0
FAN19G1796 Fragaria x ananassa HOM05D004151 ORTHO05D004775 5.1e-52 208.4 150 84.0
FAN26G2823 Fragaria x ananassa HOM05D004151 ORTHO05D004775 5.1e-52 208.4 150 84.0
CARHR194880 Cardamine hirsuta HOM05D004151 ORTHO05D004775 6.6e-52 208.0 147 84.4
Hma1.2p1_0134F.1_g061640 Hydrangea macrophylla HOM05D004151 ORTHO05D004775 1.1e-51 207.2 159 82.4
MD05G1045500 Malus domestica HOM05D004151 ORTHO05D004775 1.1e-51 207.2 150 77.3
Nn7g35851 Nelumbo nucifera HOM05D004151 ORTHO05D004775 1.1e-51 207.2 146 84.2
THA.LOC104827273 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 1.5e-51 206.8 149 83.9
Aa31LG11G11430 Aethionema arabicum HOM05D004151 ORTHO05D004775 1.9e-51 206.5 149 85.9
Nitab4.5_0009048g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.9e-51 206.5 153 79.7
Sabra13G0051900 Salix brachista HOM05D004151 ORTHO05D004775 1.9e-51 206.5 153 84.3
Ah.13g075350 Amaranthus hybridus HOM05D004151 ORTHO05D004775 2.5e-51 206.1 153 83.0
Thhalv10021561m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 2.5e-51 206.1 151 84.8
FAN23G0170 Fragaria x ananassa HOM05D004151 ORTHO05D004775 2.5e-51 206.1 150 83.3
QL07p019530 Quercus lobata HOM05D004151 ORTHO05D004775 2.5e-51 206.1 155 82.6
Thecc.05G294500 Theobroma cacao HOM05D004151 ORTHO05D004775 2.5e-51 206.1 148 85.1
EL10Ac3g06820 Beta vulgaris HOM05D004151 ORTHO05D004775 3.3e-51 205.7 147 85.7
Prupe.8G064800 Prunus persica HOM05D004151 ORTHO05D004775 3.3e-51 205.7 151 82.8
PGR142G1491 Punica granatum HOM05D004151 ORTHO05D004775 4.3e-51 205.3 143 86.7
FAN28G2413 Fragaria x ananassa HOM05D004151 ORTHO05D004775 5.6e-51 204.9 139 84.2
Lalb_Chr14g0364491 Lupinus albus HOM05D004151 ORTHO05D004775 5.6e-51 204.9 148 80.4
BolC1t05799H Brassica oleracea HOM05D004151 ORTHO05D004775 7.3e-51 204.5 153 79.1
A01p41270 Brassica napus HOM05D004151 ORTHO05D004775 9.6e-51 204.1 147 80.3
BNapus_Darmor_BZH_scaffold_78p00440 Brassica napus HOM05D004151 ORTHO05D004775 9.6e-51 204.1 147 80.3
CARHR078040 Cardamine hirsuta HOM05D004151 ORTHO05D004775 9.6e-51 204.1 148 74.3
AUR62032690 Chenopodium quinoa HOM05D004151 ORTHO05D004775 9.6e-51 204.1 145 87.6
Dinv37014 Davidia involucrata HOM05D004151 ORTHO05D004775 9.6e-51 204.1 151 78.1
Gohir.A08G213200 Gossypium hirsutum HOM05D004151 ORTHO05D004775 9.6e-51 204.1 140 87.9
Gohir.D08G230300 Gossypium hirsutum HOM05D004151 ORTHO05D004775 9.6e-51 204.1 140 87.9
Gorai.004G244500 Gossypium raimondii HOM05D004151 ORTHO05D004775 9.6e-51 204.1 140 87.9
Peaxi162Scf00003g04832 Petunia axillaris HOM05D004151 ORTHO05D004775 9.6e-51 204.1 153 73.2
THA.LOC104802867 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 9.6e-51 204.1 149 86.6
Nitab4.5_0007542g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 2.1e-50 203.0 153 75.8
Sc25g0004980 Simmondsia chinensis HOM05D004151 ORTHO05D004775 2.8e-50 202.6 151 76.2
TPR.G5895 Trifolium pratense HOM05D004151 ORTHO05D004775 2.8e-50 202.6 151 85.4
MSTRG.19934 Avicennia marina HOM05D004151 ORTHO05D004775 3.6e-50 202.2 151 81.5
SEGI_32651 Sequoiadendron giganteum HOM05D004151 ORTHO05D004775 3.6e-50 202.2 148 79.7
Carub.0006s1646 Capsella rubella HOM05D004151 ORTHO05D004775 4.7e-50 201.8 148 80.4
Sp6g26140 Schrenkiella parvula HOM05D004151 ORTHO05D004775 4.7e-50 201.8 150 80.7
CDE06G0359 Ceratophyllum demersum HOM05D004151 ORTHO05D004775 6.2e-50 201.4 149 77.9
Cc06_g22960 Coffea canephora HOM05D004151 ORTHO05D004775 6.2e-50 201.4 150 80.7
Gohir.A11G296500 Gossypium hirsutum HOM05D004151 ORTHO05D004775 6.2e-50 201.4 140 86.4
Gohir.D11G310400 Gossypium hirsutum HOM05D004151 ORTHO05D004775 6.2e-50 201.4 140 86.4
Gorai.007G343400 Gossypium raimondii HOM05D004151 ORTHO05D004775 6.2e-50 201.4 140 86.4
SGA_v2.0_scaffold274G46513 Striga asiatica HOM05D004151 ORTHO05D004775 6.2e-50 201.4 160 82.5
BraA01t04550Z Brassica rapa HOM05D004151 ORTHO05D004775 8.1e-50 201.1 147 78.9
Cfa016441 Carpinus fangiana HOM05D004151 ORTHO05D004775 8.1e-50 201.1 151 80.1
Haze_19418 Corylus avellana HOM05D004151 ORTHO05D004775 8.1e-50 201.1 151 80.1
Haze_19447 Corylus avellana HOM05D004151 ORTHO05D004775 8.1e-50 201.1 151 80.1
Lj1g0021266 Lotus japonicus HOM05D004151 ORTHO05D004775 8.1e-50 201.1 157 80.3
A03p08690 Brassica napus HOM05D004151 ORTHO05D004775 1.1e-49 200.7 157 80.3
Lalb_Chr22g0359191 Lupinus albus HOM05D004151 ORTHO05D004775 1.1e-49 200.7 154 79.9
Manes.08G144000 Manihot esculenta HOM05D004151 ORTHO05D004775 1.1e-49 200.7 149 83.2
Manes.09G141400 Manihot esculenta HOM05D004151 ORTHO05D004775 1.1e-49 200.7 149 81.9
Psat0s1971g0280 Pisum sativum HOM05D004151 ORTHO05D004775 1.1e-49 200.7 152 86.2
BcaC03g13582 Brassica carinata HOM05D004151 ORTHO05D004775 1.4e-49 200.3 149 79.9
BolC2t06882H Brassica oleracea HOM05D004151 ORTHO05D004775 1.4e-49 200.3 149 79.9
Glyma.16G041400 Glycine max HOM05D004151 ORTHO05D004775 1.4e-49 200.3 149 78.5
TWI32G1207 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 1.4e-49 200.3 151 82.8
AL6G29380 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 1.8e-49 199.9 148 75.0
Duzib106G1401 Durio zibethinus HOM05D004151 ORTHO05D004775 1.8e-49 199.9 146 82.2
MD00G1189600 Malus domestica HOM05D004151 ORTHO05D004775 1.8e-49 199.9 150 72.7
ATR0697G007 Amborella trichopoda HOM05D004151 ORTHO05D004775 2.4e-49 199.5 140 88.6
Medtr7g085640 Medicago truncatula HOM05D004151 ORTHO05D004775 3.1e-49 199.1 109 89.0
HanXRQChr07g0204461 Helianthus annuus HOM05D004151 ORTHO05D004775 4.0e-49 198.7 146 84.2
Atru.chr5.2062 Acer truncatum HOM05D004151 ORTHO05D004775 5.3e-49 198.4 148 75.0
Glyma.19G110900 Glycine max HOM05D004151 ORTHO05D004775 5.3e-49 198.4 109 83.5
Os11g0579800 Oryza sativa ssp. japonica HOM05D004151 ORTHO05D004775 6.9e-49 198.0 152 77.0
Dinv14579 Davidia involucrata HOM05D004151 ORTHO05D004775 9.0e-49 197.6 150 82.7
VMungo1383G2477 Vigna mungo HOM05D004151 ORTHO05D004775 9.0e-49 197.6 149 83.9
Aa31LG5G14500 Aethionema arabicum HOM05D004151 ORTHO05D004775 1.2e-48 197.2 149 84.6
BolC3t13499H Brassica oleracea HOM05D004151 ORTHO05D004775 1.2e-48 197.2 154 79.2
COL.COLO4_13597 Corchorus olitorius HOM05D004151 ORTHO05D004775 1.2e-48 197.2 142 85.9
C02p09730 Brassica napus HOM05D004151 ORTHO05D004775 1.5e-48 196.8 149 79.2
Aqoxy1G00486 Aquilegia oxysepala HOM05D004151 ORTHO05D004775 2.0e-48 196.4 150 80.0
BcaNung05745 Brassica carinata HOM05D004151 ORTHO05D004775 2.0e-48 196.4 148 78.4
unitig_21.g20195 Utricularia gibba HOM05D004151 ORTHO05D004775 2.0e-48 196.4 154 77.9
Duzib177G0709 Durio zibethinus HOM05D004151 ORTHO05D004775 2.6e-48 196.1 148 83.8
Potri.013G058400 Populus trichocarpa HOM05D004151 ORTHO05D004775 2.6e-48 196.1 159 79.9
SalBow5G4201 Salvia bowleyana HOM05D004151 ORTHO05D004775 2.6e-48 196.1 141 79.4
Oeu049600.1 Olea europaea HOM05D004151 ORTHO05D004775 3.4e-48 195.7 147 84.4
TWI34G0161 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 3.4e-48 195.7 160 77.5
AT5G18180 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 4.4e-48 195.3 148 73.6
CANSAT78G0749 Cannabis sativa HOM05D004151 ORTHO05D004775 4.4e-48 195.3 150 84.0
BcaNung05743 Brassica carinata HOM05D004151 ORTHO05D004775 5.8e-48 194.9 148 77.7
Oeu059999.1 Olea europaea HOM05D004151 ORTHO05D004775 5.8e-48 194.9 148 75.7
Atru.chr5.2060 Acer truncatum HOM05D004151 ORTHO05D004775 7.6e-48 194.5 148 74.3
HanXRQChr08g0216931 Helianthus annuus HOM05D004151 ORTHO05D004775 7.6e-48 194.5 152 79.6
AT3G03920 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 9.9e-48 194.1 157 80.9
BcaB01g05179 Brassica carinata HOM05D004151 ORTHO05D004775 9.9e-48 194.1 154 78.6
C03p10140 Brassica napus HOM05D004151 ORTHO05D004775 9.9e-48 194.1 154 78.6
BraA03t10192Z Brassica rapa HOM05D004151 ORTHO05D004775 9.9e-48 194.1 154 78.6
ECA233G5487 Erigeron canadensis HOM05D004151 ORTHO05D004775 9.9e-48 194.1 155 78.7
Lsat_1_v5_gn_8_145841 Lactuca sativa HOM05D004151 ORTHO05D004775 9.9e-48 194.1 154 82.5
arahy.Tifrunner.gnm1.ann1.JDMG7B Arachis hypogaea HOM05D004151 ORTHO05D004775 1.3e-47 193.7 147 85.0
arahy.Tifrunner.gnm1.ann1.PLSY77 Arachis hypogaea HOM05D004151 ORTHO05D004775 1.3e-47 193.7 147 85.0
Phvul.001G110400 Phaseolus vulgaris HOM05D004151 ORTHO05D004775 1.3e-47 193.7 154 79.9
AL3G13810 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 2.2e-47 193.0 157 80.9
CiPaw.09G001900 Carya illinoinensis HOM05D004151 ORTHO05D004775 2.2e-47 193.0 150 80.7
Lsat_1_v5_gn_8_24760 Lactuca sativa HOM05D004151 ORTHO05D004775 2.2e-47 193.0 150 80.0
Potri.019G034900 Populus trichocarpa HOM05D004151 ORTHO05D004775 3.8e-47 192.2 156 81.4
Carub.0003s0316 Capsella rubella HOM05D004151 ORTHO05D004775 8.4e-47 191.0 154 72.1
Migut.J01888 Erythranthe guttata HOM05D004151 ORTHO05D004775 8.4e-47 191.0 149 79.9
Zm00001eb200450 Zea mays HOM05D004151 ORTHO05D004775 8.4e-47 191.0 142 85.2
A02p04770 Brassica napus HOM05D004151 ORTHO05D004775 3.2e-46 189.1 149 74.5
Sabra19G0042500 Salix brachista HOM05D004151 ORTHO05D004775 4.2e-46 188.7 145 84.1
Sabra19G0044800 Salix brachista HOM05D004151 ORTHO05D004775 7.1e-46 188.0 139 87.1
BcaB05g23300 Brassica carinata HOM05D004151 ORTHO05D004775 9.3e-46 187.6 149 75.8
Hund24835 Selenicereus undatus HOM05D004151 ORTHO05D004775 1.2e-45 187.2 149 79.9
BraA02t05436Z Brassica rapa HOM05D004151 ORTHO05D004775 4.6e-45 185.3 151 73.5
Mapoly0086s0024 Marchantia polymorpha HOM05D004151 ORTHO05D004775 4.6e-45 185.3 146 78.8
CSS0045523 Camellia sinensis var. sinensis HOM05D004151 ORTHO05D004775 7.8e-45 184.5 96 89.6
Pp3c5_28430 Physcomitrium patens HOM05D004151 ORTHO05D004775 1.0e-44 184.1 107 79.4
Actinidia22083 Actinidia chinensis HOM05D004151 ORTHO05D004775 5.1e-44 181.8 142 83.1
AagrBONN_evm.TU.Sc2ySwM_362.2901 Anthoceros agrestis HOM05D004151 ORTHO05D004775 8.7e-44 181.0 151 72.2
Pp3c25_15020 Physcomitrium patens HOM05D004151 ORTHO05D004775 8.7e-44 181.0 148 77.0
Zm00001eb114360 Zea mays HOM05D004151 ORTHO05D004775 8.7e-44 181.0 185 66.5
vmacro09141 Vaccinium macrocarpon HOM05D004151 ORTHO05D004775 9.6e-43 177.6 158 75.9
CAN.G960.49 Capsicum annuum HOM05D004151 ORTHO05D004775 1.3e-42 177.2 94 89.4
CBR_g48747 Chara braunii HOM05D004151 ORTHO05D004775 1.3e-42 177.2 108 75.0
Rhsim04G0087500 Rhododendron simsii HOM05D004151 ORTHO05D004775 1.3e-42 177.2 148 79.1
Peaxi162Scf00076g01048 Petunia axillaris HOM05D004151 ORTHO05D004775 3.6e-42 175.6 152 73.7
COL.COLO4_13598 Corchorus olitorius HOM05D004151 ORTHO05D004775 1.8e-41 173.3 148 76.4
Cpa.g.sc51.114 Carica papaya HOM05D004151 ORTHO05D004775 3.1e-41 172.6 90 88.9
Cre13.g567850 Chlamydomonas reinhardtii HOM05D004151 ORTHO05D004775 4.0e-41 172.2 151 73.5
Nitab4.5_0004844g0050 Nicotiana tabacum HOM05D004151 ORTHO05D004775 2.6e-40 169.5 89 87.6
Nitab4.5_0002769g0090 Nicotiana tabacum HOM05D004151 ORTHO05D004775 7.6e-40 167.9 151 72.2
Ca_08267_v3 Cicer arietinum L. HOM05D004151 ORTHO05D004775 7.1e-38 161.4 91 84.6
Hund19236 Selenicereus undatus HOM05D004151 ORTHO05D004775 9.3e-38 161.0 97 79.4
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 8.7e-36 154.5 81 86.4
MCO13G219 Micromonas commoda HOM05D004151 ORTHO05D004775 9.6e-35 151.0 94 68.1
SMO347G0554 Selaginella moellendorffii HOM05D004151 ORTHO05D004775 4.8e-34 148.7 150 68.7
BolC2t11912H Brassica oleracea HOM05D004151 ORTHO05D004775 6.2e-34 148.3 129 62.8
C09p58800 Brassica napus HOM05D004151 ORTHO05D004775 1.1e-30 137.5 80 78.8
BraA10t42874Z Brassica rapa HOM05D004151 ORTHO05D004775 2.5e-30 136.3 105 68.6
unitig_744.g24550 Utricularia gibba HOM05D004151 ORTHO05D004775 1.1e-25 120.9 60 93.3
PRCOL_00005119 Prasinoderma coloniale HOM05D005848 ORTHO05D007532 5.3e-25 118.6 76 64.5
C02p58510 Brassica napus HOM05D004151 ORTHO05D004775 7.6e-24 114.8 95 61.1
Actinidia30553 Actinidia chinensis HOM05D004151 ORTHO05D004775 2.7e-21 106.3 56 89.3
HanXRQChr05g0143841 Helianthus annuus HOM05D004151 ORTHO05D004775 3.5e-21 105.9 107 52.3
Haze_27090 Corylus avellana HOM05D000590 ORTHO05D004775 3.0e-20 102.8 94 50.0
Oeu035726.1 Olea europaea HOM05D004151 ORTHO05D004775 1.4e-17 94.0 105 52.4
Oeu035720.1 Olea europaea HOM05D004151 ORTHO05D004775 2.4e-17 93.2 108 52.8
Zm00001eb274230 Zea mays HOM05D004151 ORTHO05D004775 2.4e-17 93.2 50 80.0
Atru.chr10.1764 Acer truncatum HOM05D004151 ORTHO05D004775 3.0e-12 76.3 48 77.1
Atru.chr5.2304 Acer truncatum HOM05D004151 ORTHO05D004775 3.0e-12 76.3 48 77.1
Atru.chr6.7 Acer truncatum HOM05D004151 ORTHO05D004775 1.1e-11 74.3 48 75.0
Atru.chr13.534 Acer truncatum HOM05D004151 ORTHO05D004775 2.5e-11 73.2 48 75.0
Atru.chr2.3197 Acer truncatum HOM05D004151 ORTHO05D004775 2.5e-11 73.2 48 75.0
Atru.chr4.2011 Acer truncatum HOM05D004151 ORTHO05D004775 2.5e-11 73.2 48 75.0
BcaB08g36698 Brassica carinata HOM05D004151 ORTHO05D004775 2.8e-10 69.7 47 74.5
BolC9t58722H Brassica oleracea HOM05D004151 ORTHO05D004775 4.5e-08 62.4 148 45.3
ECA246G0128 Erigeron canadensis HOM05D001659 ORTHO05D001659 7.7e-08 61.6 38 76.3


User provided reference genes

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