Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5737 Papaver somniferum HOM05D001716 ORTHO05D004234 1.2e-127 459.9 235 100.0
PSO478G4842 Papaver somniferum HOM05D001716 ORTHO05D004234 1.9e-106 389.4 285 74.0
PSO478G4049 Papaver somniferum HOM05D001716 ORTHO05D005823 1.2e-105 386.7 285 73.7
PSO017G3857 Papaver somniferum HOM05D001716 ORTHO05D004234 1.2e-92 343.6 197 89.8
PSO013G0101 Papaver somniferum HOM05D001716 ORTHO05D005823 8.1e-81 304.3 285 56.8
TWI15G0368 Tripterygium wilfordii HOM05D001716 ORTHO05D004234 7.5e-18 95.1 177 36.2
Os07g0178900 Oryza sativa ssp. japonica HOM05D001716 ORTHO05D004234 1.3e-17 94.4 177 34.5
THA.LOC104799554 Tarenaya hassleriana HOM05D001716 ORTHO05D004234 1.7e-17 94.0 154 38.3
AagrBONN_evm.TU.Sc2ySwM_368.3436 Anthoceros agrestis HOM05D001716 ORTHO05D004234 2.2e-17 93.6 179 33.5
TAR633G2130 Trochodendron aralioides HOM05D001716 ORTHO05D004234 2.2e-17 93.6 177 35.0
AL6G33350 Arabidopsis lyrata HOM05D001716 ORTHO05D004234 2.9e-17 93.2 154 39.0
AT5G22330 Arabidopsis thaliana HOM05D001716 ORTHO05D004234 2.9e-17 93.2 154 39.0
Duzib170G0593 Durio zibethinus HOM05D001716 ORTHO05D004234 2.9e-17 93.2 156 36.5
Aa31LG1G13210 Aethionema arabicum HOM05D001716 ORTHO05D004234 3.7e-17 92.8 154 38.3
Duzib150G0371 Durio zibethinus HOM05D001716 ORTHO05D004234 3.7e-17 92.8 177 34.5
Thhalv10013490m.g Eutrema salsugineum HOM05D001716 ORTHO05D004234 3.7e-17 92.8 183 35.5
Potri.004G199100 Populus trichocarpa HOM05D001716 ORTHO05D004234 3.7e-17 92.8 174 35.1
Sp6g22910 Schrenkiella parvula HOM05D001716 ORTHO05D004234 3.7e-17 92.8 154 38.3
MD11G1168700 Malus domestica HOM05D001716 ORTHO05D004234 4.9e-17 92.4 177 35.0
Atru.chr3.3167 Acer truncatum HOM05D001716 ORTHO05D004234 6.4e-17 92.0 177 34.5
Actinidia07135 Actinidia chinensis HOM05D001716 ORTHO05D004234 6.4e-17 92.0 230 29.1
BcaB01g04715 Brassica carinata HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
BcaB05g22733 Brassica carinata HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
BcaB08g36439 Brassica carinata HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
BcaC01g06588 Brassica carinata HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
BcaC03g13875 Brassica carinata HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
BcaC04g19566 Brassica carinata HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
A03p10690 Brassica napus HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
A10p18490 Brassica napus HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
BNapus_Darmor_BZH_scaffold_38p00730 Brassica napus HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
C02p10820 Brassica napus HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
C03p12300 Brassica napus HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
C09p54240 Brassica napus HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
C09p54310 Brassica napus HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
BolC3t13703H Brassica oleracea HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
BolC9t58299H Brassica oleracea HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
BraA03t10381Z Brassica rapa HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
BraA10t43929Z Brassica rapa HOM05D001716 ORTHO05D004234 6.4e-17 92.0 154 38.3
ClCG10G015440 Citrullus lanatus HOM05D001716 ORTHO05D004234 6.4e-17 92.0 174 34.5
MELO3C009838.2 Cucumis melo HOM05D001716 ORTHO05D004234 6.4e-17 92.0 174 34.5
CsaV3_3G041050 Cucumis sativus L. HOM05D001716 ORTHO05D004234 6.4e-17 92.0 174 34.5
Gohir.A09G097100 Gossypium hirsutum HOM05D001716 ORTHO05D004234 6.4e-17 92.0 175 34.9
Gohir.D09G096900 Gossypium hirsutum HOM05D001716 ORTHO05D004234 6.4e-17 92.0 175 34.9
Gorai.006G113600 Gossypium raimondii HOM05D001716 ORTHO05D004234 6.4e-17 92.0 175 34.9
Thecc.09G278500 Theobroma cacao HOM05D001716 ORTHO05D004234 6.4e-17 92.0 175 34.3
Ciclev10011670m.g Citrus clementina HOM05D001716 ORTHO05D004234 8.3e-17 91.7 177 35.0
Potri.009G160600 Populus trichocarpa HOM05D001716 ORTHO05D004234 8.3e-17 91.7 174 35.1
Sed0012939 Sechium edule HOM05D001716 ORTHO05D004234 8.3e-17 91.7 174 33.9
Eucgr.J00524 Eucalyptus grandis HOM05D001716 ORTHO05D004234 1.1e-16 91.3 174 34.5
Gohir.D05G082300 Gossypium hirsutum HOM05D001716 ORTHO05D004234 1.1e-16 91.3 175 34.3
Gorai.009G083900 Gossypium raimondii HOM05D001716 ORTHO05D004234 1.1e-16 91.3 175 34.3
MD03G1150000 Malus domestica HOM05D001716 ORTHO05D004234 1.1e-16 91.3 177 34.5
Nn4g22340 Nelumbo nucifera HOM05D001716 ORTHO05D004234 1.1e-16 91.3 154 37.7
Os01g0837500 Oryza sativa ssp. japonica HOM05D001716 ORTHO05D004234 1.1e-16 91.3 177 33.9
Prupe.6G137000 Prunus persica HOM05D001716 ORTHO05D004234 1.1e-16 91.3 177 34.5
Ah.12g054910 Amaranthus hybridus HOM05D001716 ORTHO05D004234 1.4e-16 90.9 162 35.2
BolC2t07150H Brassica oleracea HOM05D001716 ORTHO05D004234 1.4e-16 90.9 154 37.7
CANSAT01G3043 Cannabis sativa HOM05D001716 ORTHO05D004234 1.4e-16 90.9 177 33.9
PSO339G4331 Papaver somniferum HOM05D001716 ORTHO05D004234 1.4e-16 90.9 177 34.5
PSO384G0177 Papaver somniferum HOM05D001716 ORTHO05D004234 1.4e-16 90.9 177 34.5
PGR119G1888 Punica granatum HOM05D001716 ORTHO05D004234 1.4e-16 90.9 175 33.7
Sed0005678 Sechium edule HOM05D001716 ORTHO05D004234 1.8e-16 90.5 171 34.5
SEGI_07638 Sequoiadendron giganteum HOM05D001716 ORTHO05D004234 1.8e-16 90.5 154 37.0
Aqoxy3G01288 Aquilegia oxysepala HOM05D001716 ORTHO05D004234 2.4e-16 90.1 174 33.3
Dinv32751 Davidia involucrata HOM05D001716 ORTHO05D004234 2.4e-16 90.1 154 37.0
arahy.Tifrunner.gnm1.ann1.07RPJW Arachis hypogaea HOM05D001716 ORTHO05D004234 3.2e-16 89.7 174 34.5
MSTRG.18657 Avicennia marina HOM05D001716 ORTHO05D004234 3.2e-16 89.7 154 37.0
CSS0009123 Camellia sinensis var. sinensis HOM05D001716 ORTHO05D004234 3.2e-16 89.7 154 37.0
CSS0024984 Camellia sinensis var. sinensis HOM05D001716 ORTHO05D004234 3.2e-16 89.7 154 37.0
Cpa.g.sc195.28 Carica papaya HOM05D001716 ORTHO05D004234 3.2e-16 89.7 154 36.4
CiPaw.14G097900 Carya illinoinensis HOM05D001716 ORTHO05D004234 3.2e-16 89.7 177 33.9
AUR62007270 Chenopodium quinoa HOM05D001716 ORTHO05D004234 3.2e-16 89.7 177 33.9
AUR62018729 Chenopodium quinoa HOM05D001716 ORTHO05D004234 3.2e-16 89.7 177 33.9
Manes.04G001300 Manihot esculenta HOM05D001716 ORTHO05D004234 3.2e-16 89.7 154 37.0
RcHm_v2.0_Chr5g0061781 Rosa chinensis HOM05D001716 ORTHO05D004234 3.2e-16 89.7 177 33.3
RcHm_v2.0_Chr6g0278081 Rosa chinensis HOM05D001716 ORTHO05D004234 3.2e-16 89.7 177 33.9
Carub.0006s2007 Capsella rubella HOM05D001716 ORTHO05D004234 4.1e-16 89.4 154 37.0
CARHR191210 Cardamine hirsuta HOM05D001716 ORTHO05D004234 4.1e-16 89.4 154 37.0
Gohir.A05G079400 Gossypium hirsutum HOM05D001716 ORTHO05D004234 4.1e-16 89.4 154 37.0
Glyma.08G204200 Glycine max HOM05D001716 ORTHO05D004234 5.4e-16 89.0 154 37.0
Ca_15874_v3 Cicer arietinum L. HOM05D001716 ORTHO05D004234 7.0e-16 88.6 174 33.9
Migut.L01693 Erythranthe guttata HOM05D001716 ORTHO05D004234 7.0e-16 88.6 154 36.4
Glyma.07G019000 Glycine max HOM05D001716 ORTHO05D004234 7.0e-16 88.6 154 36.4
Phvul.010G148200 Phaseolus vulgaris HOM05D001716 ORTHO05D004234 7.0e-16 88.6 154 36.4
VMungo0331G1056 Vigna mungo HOM05D001716 ORTHO05D004234 7.0e-16 88.6 154 36.4
ATR0115G019 Amborella trichopoda HOM05D001716 ORTHO05D004234 9.2e-16 88.2 154 37.0
FvH4_3g34140 Fragaria vesca HOM05D001716 ORTHO05D004234 9.2e-16 88.2 177 32.8
Mapoly0108s0031 Marchantia polymorpha HOM05D001716 ORTHO05D004234 9.2e-16 88.2 174 33.3
PGR102G0473 Punica granatum HOM05D001716 ORTHO05D004234 9.2e-16 88.2 192 31.8
Sopen06g021570 Solanum pennellii HOM05D001716 ORTHO05D004234 9.2e-16 88.2 154 37.7
SGA_v2.0_scaffold196G40980 Striga asiatica HOM05D001716 ORTHO05D004234 9.2e-16 88.2 154 36.4
TAR623G1135 Trochodendron aralioides HOM05D001716 ORTHO05D004234 9.2e-16 88.2 154 36.4
HPP92_018992 Vanilla planifolia HOM05D001716 ORTHO05D004234 9.2e-16 88.2 133 37.6
Zm00001eb231050 Zea mays HOM05D001716 ORTHO05D004234 9.2e-16 88.2 153 35.3
LjContig00081g0024923 Lotus japonicus HOM05D001716 ORTHO05D004234 1.2e-15 87.8 174 33.9
QL08p000280 Quercus lobata HOM05D001716 ORTHO05D004234 1.2e-15 87.8 174 33.9
CDE06G2036 Ceratophyllum demersum HOM05D001716 ORTHO05D004234 1.6e-15 87.4 154 36.4
Medtr3g104080 Medicago truncatula HOM05D001716 ORTHO05D004234 1.6e-15 87.4 154 35.7
PGSC0003DMG402016772 Solanum tuberosum HOM05D001716 ORTHO05D004234 1.6e-15 87.4 154 37.0
TPR.G25359 Trifolium pratense HOM05D001716 ORTHO05D004234 1.6e-15 87.4 154 35.7
Pp3c16_21430 Physcomitrium patens HOM05D001716 ORTHO05D004234 2.0e-15 87.0 174 33.3
Psat5g037320 Pisum sativum HOM05D001716 ORTHO05D004234 2.0e-15 87.0 153 35.3
Solyc11g069370.3 Solanum lycopersicum HOM05D001716 ORTHO05D004234 2.0e-15 87.0 154 36.4
HanXRQChr14g0452881 Helianthus annuus HOM05D001716 ORTHO05D004234 2.7e-15 86.7 154 35.7
Lj1g0022809 Lotus japonicus HOM05D001716 ORTHO05D004234 2.7e-15 86.7 154 35.7
Lj4g0002833 Lotus japonicus HOM05D001716 ORTHO05D004234 2.7e-15 86.7 154 35.7
Lalb_Chr22g0351411 Lupinus albus HOM05D001716 ORTHO05D004234 3.5e-15 86.3 156 34.6
PRCOL_00001022 Prasinoderma coloniale HOM05D001716 ORTHO05D004234 3.5e-15 86.3 174 31.6
Zm00001eb208840 Zea mays HOM05D001716 ORTHO05D004234 3.5e-15 86.3 153 35.3
CBR_g52323 Chara braunii HOM05D001716 ORTHO05D004234 4.6e-15 85.9 178 32.0
ECA236G0721 Erigeron canadensis HOM05D001716 ORTHO05D004234 4.6e-15 85.9 154 35.7
PGSC0003DMG400008103 Solanum tuberosum HOM05D001716 ORTHO05D004234 4.6e-15 85.9 154 35.7
CBR_g72636 Chara braunii HOM05D001716 ORTHO05D004234 7.8e-15 85.1 174 31.6
Lalb_Chr01g0013001 Lupinus albus HOM05D001716 ORTHO05D004234 7.8e-15 85.1 186 30.6
Haze_26292 Corylus avellana HOM05D001716 ORTHO05D004234 1.0e-14 84.7 162 33.3
Sc21g0006950 Simmondsia chinensis HOM05D001716 ORTHO05D004234 1.0e-14 84.7 150 36.0
Lsat_1_v5_gn_2_98340 Lactuca sativa HOM05D001716 ORTHO05D004234 1.3e-14 84.3 154 35.1
Lalb_Chr14g0373181 Lupinus albus HOM05D001716 ORTHO05D004234 1.3e-14 84.3 171 33.9
CDE02G4288 Ceratophyllum demersum HOM05D001716 ORTHO05D004234 1.7e-14 84.0 150 36.0
arahy.Tifrunner.gnm1.ann1.K86VTF Arachis hypogaea HOM05D001716 ORTHO05D004234 2.3e-14 83.6 150 35.3
MCO03G216 Micromonas commoda HOM05D001716 ORTHO05D004234 2.3e-14 83.6 154 36.4
Actinidia03732 Actinidia chinensis HOM05D001716 ORTHO05D004234 3.0e-14 83.2 160 35.6
SMO351G0419 Selaginella moellendorffii HOM05D001716 ORTHO05D004234 3.0e-14 83.2 174 31.0
Solyc06g062350.4 Solanum lycopersicum HOM05D001716 ORTHO05D004234 3.0e-14 83.2 150 36.7
Migut.D02220 Erythranthe guttata HOM05D001716 ORTHO05D004234 5.0e-14 82.4 170 32.9
GSVIVG01025181001 Vitis vinifera HOM05D001716 ORTHO05D004234 5.0e-14 82.4 154 35.7
Sopen11g028090 Solanum pennellii HOM05D001716 ORTHO05D004234 6.6e-14 82.0 150 35.3
Nitab4.5_0005621g0140 Nicotiana tabacum HOM05D001716 ORTHO05D004234 1.5e-13 80.9 163 34.4
Cc01_g11170 Coffea canephora HOM05D001716 ORTHO05D004234 1.9e-13 80.5 163 34.4
Oeu030180.1 Olea europaea HOM05D001716 ORTHO05D004234 1.9e-13 80.5 154 35.7
DCAR_006059 Daucus carota HOM05D001716 ORTHO05D004234 3.3e-13 79.7 184 32.1
FAN11G1436 Fragaria x ananassa HOM05D001716 ORTHO05D004234 3.3e-13 79.7 188 30.9
FAN16G0345 Fragaria x ananassa HOM05D001716 ORTHO05D004234 3.3e-13 79.7 188 30.9
FAN21G3845 Fragaria x ananassa HOM05D001716 ORTHO05D004234 3.3e-13 79.7 188 30.9
SGA_v2.0_scaffold7G04105 Striga asiatica HOM05D001716 ORTHO05D004234 3.3e-13 79.7 168 33.3
Cre09.g414050 Chlamydomonas reinhardtii HOM05D001716 ORTHO05D004234 7.3e-13 78.6 157 31.2
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 1.2e-12 77.8 174 32.8
Haze_23345 Corylus avellana HOM05D001716 ORTHO05D004234 2.1e-12 77.0 177 32.2
EL10Ac5g12141 Beta vulgaris HOM05D001716 ORTHO05D004234 3.6e-12 76.3 185 29.2
MBI18_g19079_MAGBIO Magnolia biondii HOM05D001716 ORTHO05D004234 3.6e-12 76.3 154 34.4
TAR362G0006 Trochodendron aralioides HOM05D001716 ORTHO05D004234 4.7e-12 75.9 146 35.6
FAN20G2299 Fragaria x ananassa HOM05D001716 ORTHO05D004234 8.0e-12 75.1 177 31.6
Lj2A1029T33 Lonicera japonica HOM05D001716 ORTHO05D004234 1.8e-11 73.9 154 33.8
Nitab4.5_0000650g0210 Nicotiana tabacum HOM05D001716 ORTHO05D004234 2.3e-11 73.6 154 33.8
Peaxi162Scf00270g00813 Petunia axillaris HOM05D001716 ORTHO05D004234 2.3e-11 73.6 154 33.8
Oeu001267.3 Olea europaea HOM05D001716 ORTHO05D004234 4.0e-11 72.8 216 30.1
HPP92_019095 Vanilla planifolia HOM05D001716 ORTHO05D004234 6.8e-11 72.0 92 42.4
FvH4_2g15320 Fragaria vesca HOM05D001716 ORTHO05D004234 1.2e-10 71.2 122 36.1
TAR362G0106 Trochodendron aralioides HOM05D001716 ORTHO05D004234 2.0e-10 70.5 155 36.1
vmacro12158 Vaccinium macrocarpon HOM05D001716 ORTHO05D004234 1.7e-09 67.4 139 32.4
Medtr6g023370 Medicago truncatula HOM05D001716 ORTHO05D004234 2.2e-09 67.0 173 29.5
FAN25G1324 Fragaria x ananassa HOM05D001716 ORTHO05D004234 2.9e-09 66.6 150 30.7
FAN25G1887 Fragaria x ananassa HOM05D001716 ORTHO05D004234 1.1e-08 64.7 147 31.3
Hma1.2p1_1031F.1_g250020 Hydrangea macrophylla HOM05D001716 ORTHO05D004234 1.1e-08 64.7 162 30.9
Nn3g16472 Nelumbo nucifera HOM05D001716 ORTHO05D004234 1.9e-08 63.9 136 30.9
unitig_747.g21999 Utricularia gibba HOM05D001716 ORTHO05D004234 5.4e-08 62.4 176 29.5
Nitab4.5_0006639g0030 Nicotiana tabacum HOM05D001716 ORTHO05D004234 3.5e-07 59.7 154 29.9
QL01p011839 Quercus lobata HOM05D001716 ORTHO05D004234 3.5e-07 59.7 175 29.1
Rhsim01G0217300 Rhododendron simsii HOM05D001716 ORTHO05D004234 4.6e-07 59.3 153 30.7
Zm00001eb325580 Zea mays HOM05D001716 ORTHO05D005286 6.0e-07 58.9 165 29.7
Nitab4.5_0006639g0040 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.0e-06 58.2 161 29.8
CAN.G631.23 Capsicum annuum HOM05D001716 ORTHO05D004234 1.7e-06 57.4 153 30.7
Haze_26491 Corylus avellana HOM05D001716 ORTHO05D005286 5.0e-06 55.8 120 30.8
Atru.chr5.2518 Acer truncatum HOM05D001716 ORTHO05D015197 6.6e-06 55.5 135 28.1
HPP92_019986 Vanilla planifolia HOM05D001716 ORTHO05D005286 8.6e-06 55.1 137 31.4
Zm00001eb107710 Zea mays HOM05D001716 ORTHO05D005286 8.6e-06 55.1 142 32.4


User provided reference genes

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