Gene: ATR0115G019

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0115G019
  • Transcript Identifier ATR0115G019.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00175 : 547300-556534 : positive

Gene Family Information

  • ID HOM05D001716
  • #Genes/#Species 378/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00175.27.v1.0
  • pacid 31572467

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900150
ISO
PLAZA Integrative Orthologyregulation of defense response to fungus AT5G22330
GO:0048507
ISO
PLAZA Integrative Orthologymeristem development AT5G22330

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003678
IEA
InterProDNA helicase activity
GO:0005524
IEA
InterProATP binding
GO:0043139
IEA
InterPro5'-3' DNA helicase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G22330

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G22330
GO:0097255
ISO
PLAZA Homology (enrichment)R2TP complex HOM05D001716
GO:0035267
ISO
PLAZA Homology (enrichment)NuA4 histone acetyltransferase complex HOM05D001716
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G22330
GO:0031011
ISO
PLAZA Homology (enrichment)Ino80 complex HOM05D001716
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G22330

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041048 RuvB-like, AAA-lid domain
IPR003593 AAA+ ATPase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR010339 TIP49, P-loop domain
IPR042487 RuvBL1/2, DNA/RNA binding domain
IPR027238 RuvB-like
Mapman id Description
12.3.1.1.4 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.helicase component RVB
12.4.4.5 Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.helicase component RVB