Gene: CAN.G631.23
General Information
Structural Information
- Species Capsicum annuum
- Gene Identifier CAN.G631.23
- Transcript Identifier CAN.T631.23
- Gene Type Coding gene
- Location PGAv.1.6.scaffold631 : 518966-524673 : positive
Gene Family Information
- ID HOM05D001716
- #Genes/#Species 378/97
- Phylogenetic origin
- ID ORTHO05D004234
- #Genes/#Species 186/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id CA.PGAv.1.6.scaffold631.23
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0006310 | IEA | InterPro | DNA recombination | |
| GO:1900150 | ISO | PLAZA Integrative Orthology | regulation of defense response to fungus | AT5G22330 |
| GO:0048507 | ISO | PLAZA Integrative Orthology | meristem development | AT5G22330 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043139 | IEA | InterPro | 5'-3' DNA helicase activity | |
| GO:0003678 | IEA | InterPro | DNA helicase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0009378 | IEA | InterPro | four-way junction helicase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G22330 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G22330 |
| GO:0097255 | ISO | PLAZA Homology (enrichment) | R2TP complex | HOM05D001716 |
| GO:0035267 | ISO | PLAZA Homology (enrichment) | NuA4 histone acetyltransferase complex | HOM05D001716 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G22330 |
| GO:0031011 | ISO | PLAZA Homology (enrichment) | Ino80 complex | HOM05D001716 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G22330 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR027238 | RuvB-like |
| IPR041048 | RuvB-like, AAA-lid domain |
| IPR010339 | TIP49, P-loop domain |
| IPR008824 | RuvB-like P-loop domain |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR003593 | AAA+ ATPase domain |
| IPR042487 | RuvBL1/2, DNA/RNA binding domain |
| Mapman id | Description |
|---|---|
| 12.3.1.1.4 | Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.helicase component RVB |
| 12.4.4.5 | Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.helicase component RVB |