Gene: Zm00001eb107710

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb107710
  • Transcript Identifier Zm00001eb107710_T001
  • Gene Type Coding gene
  • Location 2 : 214125869-214128932 : positive

Gene Family Information

  • ID HOM05D001716
  • #Genes/#Species 378/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb107710_T001
  • pid Zm00001eb107710_P001
  • uniprot A0A3L6FTK9
  • uniprot B6TN62
  • entrez 100284260
  • refseq NM_001157155.2
  • refseq NP_001150627.1
  • V4_identifier Zm00001d006680

Descriptions

  • Description Zm00001e010626
  • Description RuvB-like helicase
  • Description P-loop containing nucleoside triphosphate hydrolases superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016573
IBA
GOA Databasehistone acetylation
GO:0000492
IBA
GOA Databasebox C/D snoRNP assembly
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006338
IBA
GOA Databasechromatin remodeling
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003678
IBA
IEA
GOA DatabaseDNA helicase activity
GO:0003678
IEA
InterProDNA helicase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G67630
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0043139
IEA
GOA Database5'-3' DNA helicase activity
GO:0043139
IEA
InterPro5'-3' DNA helicase activity
GO:0004386
IEA
GOA Databasehelicase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G67630
GO:0097255
IBA
IEA
GOA DatabaseR2TP complex
GO:0097255
IEA
InterProR2TP complex
GO:0035267
IBA
IEA
GOA DatabaseNuA4 histone acetyltransferase complex
GO:0035267
IEA
InterProNuA4 histone acetyltransferase complex
GO:0031011
IBA
IEA
GOA DatabaseIno80 complex
GO:0031011
IEA
InterProIno80 complex
GO:0000812
IBA
GOA DatabaseSwr1 complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR041048 RuvB-like, AAA-lid domain
IPR037942 RuvB-like helicase 2
IPR010339 TIP49, P-loop domain
IPR042487 RuvBL1/2, DNA/RNA binding domain
IPR027238 RuvB-like
IPR003593 AAA+ ATPase domain
Mapman id Description
12.3.1.1.4 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.helicase component RVB
12.4.4.5 Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.helicase component RVB