Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3334 Papaver somniferum HOM05D004448 ORTHO05D005919 6.6e-264 913.7 481 100.0
PSO210G5509 Papaver somniferum HOM05D004448 ORTHO05D005919 1.1e-239 833.2 471 93.6
Nn8g38906 Nelumbo nucifera HOM05D004448 ORTHO05D005919 3.8e-118 429.5 512 46.5
GSVIVG01015227001 Vitis vinifera HOM05D004448 ORTHO05D005919 3.8e-110 402.9 486 45.3
Actinidia25266 Actinidia chinensis HOM05D004448 ORTHO05D005919 6.6e-107 392.1 483 44.7
Prupe.7G212600 Prunus persica HOM05D004448 ORTHO05D005919 5.6e-106 389.0 489 45.2
MBI08_g34934_MAGBIO Magnolia biondii HOM05D004448 ORTHO05D005919 7.4e-106 388.7 402 51.5
Dinv36750 Davidia involucrata HOM05D004448 ORTHO05D005919 9.6e-106 388.3 495 44.8
Aqoxy5G03492 Aquilegia oxysepala HOM05D004448 ORTHO05D005919 2.1e-105 387.1 411 56.4
QL02p063021 Quercus lobata HOM05D004448 ORTHO05D005919 3.4e-103 379.8 508 42.9
Dinv42301 Davidia involucrata HOM05D004448 ORTHO05D005919 4.5e-103 379.4 506 43.3
CSS0023607 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 3.8e-102 376.3 487 44.1
Cfa003108 Carpinus fangiana HOM05D004448 ORTHO05D005919 1.1e-101 374.8 470 44.9
ClCG03G015750 Citrullus lanatus HOM05D004448 ORTHO05D005919 5.5e-101 372.5 485 43.5
FAN26G0987 Fragaria x ananassa HOM05D004448 ORTHO05D005919 1.2e-100 371.3 483 43.3
FAN26G2794 Fragaria x ananassa HOM05D004448 ORTHO05D005919 2.1e-100 370.5 486 43.6
Sabra06G0118700 Salix brachista HOM05D004448 ORTHO05D005919 4.6e-100 369.4 495 42.6
FvH4_1g07151 Fragaria vesca HOM05D004448 ORTHO05D005919 6.0e-100 369.0 495 43.2
Rhsim05G0022900 Rhododendron simsii HOM05D004448 ORTHO05D005919 3.9e-99 366.3 512 41.0
Haze_25890 Corylus avellana HOM05D004448 ORTHO05D005919 1.9e-98 364.0 476 44.3
RcHm_v2.0_Chr2g0093041 Rosa chinensis HOM05D004448 ORTHO05D005919 1.3e-97 361.3 489 42.3
AUR62031324 Chenopodium quinoa HOM05D004448 ORTHO05D005919 2.1e-97 360.5 481 43.9
TWI32G1061 Tripterygium wilfordii HOM05D004448 ORTHO05D005919 4.0e-96 356.3 492 41.9
Nitab4.5_0000713g0030 Nicotiana tabacum HOM05D004448 ORTHO05D005919 1.2e-95 354.8 486 41.8
Cc06_g11170 Coffea canephora HOM05D004448 ORTHO05D005919 1.5e-95 354.4 504 41.3
Potri.006G150000 Populus trichocarpa HOM05D004448 ORTHO05D005919 1.0e-94 351.7 494 41.7
AUR62027409 Chenopodium quinoa HOM05D004448 ORTHO05D005919 1.3e-94 351.3 483 43.1
Nitab4.5_0000938g0020 Nicotiana tabacum HOM05D004448 ORTHO05D005919 1.7e-94 350.9 494 41.5
Hma1.2p1_0663F.1_g198910 Hydrangea macrophylla HOM05D004448 ORTHO05D005919 8.4e-94 348.6 459 43.8
CsaV3_1G040260 Cucumis sativus L. HOM05D004448 ORTHO05D005919 7.1e-93 345.5 486 41.8
CDE09G0006 Ceratophyllum demersum HOM05D004448 ORTHO05D005919 9.3e-93 345.1 447 44.7
Oeu024590.1 Olea europaea HOM05D004448 ORTHO05D005919 1.6e-92 344.4 413 45.5
Phvul.004G171600 Phaseolus vulgaris HOM05D004448 ORTHO05D005919 1.6e-92 344.4 474 42.8
EL10Ac8g19309 Beta vulgaris HOM05D004448 ORTHO05D005919 2.1e-92 344.0 470 43.4
PGSC0003DMG400033614 Solanum tuberosum HOM05D004448 ORTHO05D005919 3.5e-92 343.2 519 38.5
vmacro17218 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 1.8e-91 340.9 465 41.7
Manes.03G032000 Manihot esculenta HOM05D004448 ORTHO05D005919 3.0e-91 340.1 486 41.2
vmacro22686 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 3.9e-91 339.7 465 41.5
COL.COLO4_18221 Corchorus olitorius HOM05D004448 ORTHO05D005919 5.1e-91 339.3 493 40.2
Lj2g0008301 Lotus japonicus HOM05D004448 ORTHO05D005919 8.7e-91 338.6 507 41.4
CiPaw.03G218000 Carya illinoinensis HOM05D004448 ORTHO05D005919 3.3e-90 336.7 478 42.3
MELO3C015453.2 Cucumis melo HOM05D004448 ORTHO05D005919 7.4e-90 335.5 482 41.5
Thecc.09G092200 Theobroma cacao HOM05D004448 ORTHO05D005919 1.6e-89 334.3 509 39.9
PGR142G4073 Punica granatum HOM05D004448 ORTHO05D005919 2.1e-89 334.0 485 40.0
Ah.14g085380 Amaranthus hybridus HOM05D004448 ORTHO05D005919 3.7e-89 333.2 483 41.6
RhsimUnG0189000 Rhododendron simsii HOM05D004448 ORTHO05D005919 4.8e-89 332.8 447 41.4
Peaxi162Scf00175g00047 Petunia axillaris HOM05D004448 ORTHO05D005919 8.2e-89 332.0 529 39.7
CANSAT56G0950 Cannabis sativa HOM05D004448 ORTHO05D005919 2.4e-88 330.5 406 45.1
CsaV3_UNG066510 Cucumis sativus L. HOM05D004448 ORTHO05D005919 4.1e-88 329.7 475 41.3
Sopen07g011050 Solanum pennellii HOM05D004448 ORTHO05D005919 2.0e-87 327.4 493 39.4
FAN19G1271 Fragaria x ananassa HOM05D004448 ORTHO05D005919 1.3e-86 324.7 477 39.2
Solyc07g021550.3 Solanum lycopersicum HOM05D004448 ORTHO05D005919 1.3e-86 324.7 493 39.1
Glyma.07G128700 Glycine max HOM05D004448 ORTHO05D005919 1.7e-86 324.3 473 40.4
Medtr7g090060 Medicago truncatula HOM05D004448 ORTHO05D005919 1.7e-86 324.3 410 45.6
arahy.Tifrunner.gnm1.ann1.LLR3FQ Arachis hypogaea HOM05D004448 ORTHO05D005919 3.8e-86 323.2 418 44.5
FAN23G3053 Fragaria x ananassa HOM05D004448 ORTHO05D005919 5.0e-86 322.8 476 39.5
Duzib168G0645 Durio zibethinus HOM05D004448 ORTHO05D005919 6.5e-86 322.4 505 39.4
Eucgr.C00913 Eucalyptus grandis HOM05D004448 ORTHO05D005919 1.1e-85 321.6 511 38.6
Lsat_1_v5_gn_5_145680 Lactuca sativa HOM05D004448 ORTHO05D005919 1.4e-85 321.2 468 42.7
Nitab4.5_0004087g0010 Nicotiana tabacum HOM05D004448 ORTHO05D005919 9.3e-85 318.5 409 43.0
VMungo0464G0625 Vigna mungo HOM05D005189 ORTHO05D006093 9.3e-85 318.5 429 42.9
Ciclev10010615m.g Citrus clementina HOM05D004448 ORTHO05D005919 2.1e-84 317.4 488 38.3
arahy.Tifrunner.gnm1.ann1.6Q96ZG Arachis hypogaea HOM05D004448 ORTHO05D005919 3.5e-84 316.6 417 44.1
DCAR_024685 Daucus carota HOM05D004448 ORTHO05D005919 4.6e-84 316.2 471 38.4
Medtr6g092520 Medicago truncatula HOM05D004448 ORTHO05D005919 7.9e-84 315.5 406 44.6
Psat1g049640 Pisum sativum HOM05D004448 ORTHO05D005919 5.1e-83 312.8 413 42.9
Sc18g0001910 Simmondsia chinensis HOM05D004448 ORTHO05D005919 5.1e-83 312.8 415 44.3
Hund06702 Selenicereus undatus HOM05D004448 ORTHO05D005919 4.1e-80 303.1 411 42.1
HanXRQChr12g0354731 Helianthus annuus HOM05D004448 ORTHO05D005919 1.5e-79 301.2 301 52.2
Gohir.D08G265800 Gossypium hirsutum HOM05D004448 ORTHO05D005919 2.6e-79 300.4 501 38.1
RcHm_v2.0_Chr2g0093031 Rosa chinensis HOM05D004448 ORTHO05D005919 8.5e-78 295.4 495 38.6
ECA234G2909 Erigeron canadensis HOM05D004448 ORTHO05D005919 7.2e-77 292.4 301 51.5
Gohir.D08G266000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.2e-76 291.6 410 41.5
Gohir.A08G245000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 3.6e-76 290.0 503 37.6
Cpa.g.sc7.238 Carica papaya HOM05D004448 ORTHO05D005919 4.6e-76 289.7 303 49.8
A10p14110 Brassica napus HOM05D004448 ORTHO05D005919 2.3e-75 287.3 477 39.8
BraA10t43502Z Brassica rapa HOM05D004448 ORTHO05D005919 3.0e-75 287.0 477 39.6
CSS0050052 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 6.7e-75 285.8 502 42.8
SalBow6G4094 Salvia bowleyana HOM05D004448 ORTHO05D005919 2.5e-74 283.9 408 40.4
C09p48340 Brassica napus HOM05D004448 ORTHO05D005919 1.3e-73 281.6 478 38.5
BcaC04g20054 Brassica carinata HOM05D004448 ORTHO05D005919 2.2e-73 280.8 478 38.7
AT5G56780 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 3.7e-73 280.0 486 36.0
BolC9t57684H Brassica oleracea HOM05D004448 ORTHO05D005919 4.8e-73 279.6 477 38.4
Migut.J00591 Erythranthe guttata HOM05D004448 ORTHO05D005919 1.4e-72 278.1 313 48.2
Rhsim03G0233500 Rhododendron simsii HOM05D004448 ORTHO05D005919 3.1e-72 276.9 488 36.9
Aa31LG3G12720 Aethionema arabicum HOM05D004448 ORTHO05D005919 1.2e-71 275.0 527 35.5
BcaB08g36059 Brassica carinata HOM05D004448 ORTHO05D005919 3.4e-71 273.5 478 36.6
THA.LOC104813490 Tarenaya hassleriana HOM05D004448 ORTHO05D005919 3.8e-70 270.0 478 35.6
Carub.0008s1726 Capsella rubella HOM05D004448 ORTHO05D005919 1.9e-69 267.7 482 37.3
Sp6g18520 Schrenkiella parvula HOM05D004448 ORTHO05D005919 2.5e-69 267.3 477 36.7
Atru.chr7.1561 Acer truncatum HOM05D004448 ORTHO05D005919 1.6e-68 264.6 546 33.7
Zm00001eb325970 Zea mays HOM05D004448 ORTHO05D005919 1.6e-68 264.6 545 35.8
C04p01820 Brassica napus HOM05D004448 ORTHO05D005919 3.6e-68 263.5 461 36.0
unitig_0.g218 Utricularia gibba HOM05D004448 ORTHO05D005919 3.6e-68 263.5 416 37.5
Ca_08398_v3 Cicer arietinum L. HOM05D004448 ORTHO05D005919 1.0e-67 261.9 301 50.8
HPP92_006937 Vanilla planifolia HOM05D004448 ORTHO05D005919 2.3e-67 260.8 316 45.9
Thhalv10015325m.g Eutrema salsugineum HOM05D004448 ORTHO05D005919 3.0e-67 260.4 474 36.9
BcaC02g12506 Brassica carinata HOM05D004448 ORTHO05D005919 8.8e-67 258.8 472 36.4
vmacro06280 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 1.1e-66 258.5 315 46.7
BraA05t19157Z Brassica rapa HOM05D004448 ORTHO05D005919 2.6e-66 257.3 471 36.5
Gohir.A08G244900 Gossypium hirsutum HOM05D004448 ORTHO05D005919 5.7e-66 256.1 471 38.2
Ciclev10008074m.g Citrus clementina HOM05D004448 ORTHO05D005919 7.4e-66 255.8 477 34.8
BcaC02g12705 Brassica carinata HOM05D004448 ORTHO05D005919 3.7e-65 253.4 473 34.5
AL8G32620 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 1.4e-64 251.5 531 33.0
ATR0705G152 Amborella trichopoda HOM05D004448 ORTHO05D005919 1.2e-63 248.4 306 45.8
Duzib150G0429 Durio zibethinus HOM05D004448 ORTHO05D005919 1.2e-63 248.4 526 32.3
CARHR270530 Cardamine hirsuta HOM05D004448 ORTHO05D005919 5.0e-62 243.0 469 34.8
Os07g0586700 Oryza sativa ssp. japonica HOM05D004448 ORTHO05D005919 5.0e-62 243.0 514 34.0
Mapoly0070s0093 Marchantia polymorpha HOM05D004448 ORTHO05D005919 3.2e-61 240.4 446 33.9
Aa31LG2G21230 Aethionema arabicum HOM05D004448 ORTHO05D005919 5.5e-61 239.6 470 34.7
A05p01610 Brassica napus HOM05D004448 ORTHO05D005919 1.0e-59 235.3 309 44.7
Pp3c3_34250 Physcomitrium patens HOM05D004448 ORTHO05D005919 2.7e-52 210.7 331 38.4
AagrBONN_evm.TU.Sc2ySwM_117.4075 Anthoceros agrestis HOM05D004448 ORTHO05D005919 5.2e-51 206.5 354 35.6
Rhsim03G0233900 Rhododendron simsii HOM05D004448 ORTHO05D005919 1.3e-49 201.8 296 38.2
TPR.G40396 Trifolium pratense HOM05D004448 ORTHO05D005919 2.0e-47 194.5 245 46.1
FvH4_1g07150 Fragaria vesca HOM05D004448 ORTHO05D005919 2.2e-46 191.0 347 33.4
Sed0012121 Sechium edule HOM05D004448 ORTHO05D005919 4.2e-45 186.8 354 35.6
CBR_g29538 Chara braunii HOM05D004448 ORTHO05D005919 6.1e-44 183.0 505 30.1
SMO139G0129 Selaginella moellendorffii HOM05D006068 ORTHO05D007579 1.0e-43 182.2 331 36.3
MD02G1076000 Malus domestica HOM05D004448 ORTHO05D005919 3.0e-43 180.6 143 59.4
Gohir.A08G245100 Gossypium hirsutum HOM05D004448 ORTHO05D005919 9.8e-42 175.6 291 39.5
SGA_v2.0_scaffold62G21589 Striga asiatica HOM05D004448 ORTHO05D005919 2.4e-40 171.0 143 55.9
Pp3c4_9790 Physcomitrium patens HOM05D004448 ORTHO05D005919 9.2e-40 169.1 326 35.0
Gorai.N024000 Gossypium raimondii HOM05D004448 ORTHO05D005919 1.2e-39 168.7 297 38.4
CARHR270520 Cardamine hirsuta HOM05D004448 ORTHO05D005919 5.9e-39 166.4 325 36.0
Pp3c27_3080 Physcomitrium patens HOM05D004448 ORTHO05D005919 2.8e-36 157.5 573 26.5
CANSAT56G3488 Cannabis sativa HOM05D004448 ORTHO05D005919 6.1e-36 156.4 262 37.4
Pp3c15_21310 Physcomitrium patens HOM05D004448 ORTHO05D005919 8.0e-36 156.0 394 30.2
Pp3c16_1200 Physcomitrium patens HOM05D004448 ORTHO05D005919 8.0e-36 156.0 573 26.7
TPR.G35500 Trifolium pratense HOM05D004448 ORTHO05D005919 8.0e-36 156.0 148 55.4
Lalb_Chr24g0393831 Lupinus albus HOM05D004448 ORTHO05D005919 1.7e-33 148.3 153 53.6
SMO157G0009 Selaginella moellendorffii HOM05D006068 ORTHO05D007579 4.9e-33 146.7 292 34.6
RhsimUnG0145000 Rhododendron simsii HOM05D004448 ORTHO05D005919 4.1e-32 143.7 157 47.8
AT5G56770 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 1.3e-30 138.7 180 43.3
TPR.G35590 Trifolium pratense HOM05D004448 ORTHO05D005919 2.5e-29 134.4 103 62.1
Rhsim05G0023200 Rhododendron simsii HOM05D004448 ORTHO05D005919 5.6e-29 133.3 289 31.8
RhsimUnG0144800 Rhododendron simsii HOM05D004448 ORTHO05D005919 5.6e-29 133.3 289 31.8
MD02G1075500 Malus domestica HOM05D004448 ORTHO05D005919 3.6e-28 130.6 261 33.0
AL8G32610 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 1.8e-27 128.3 174 42.5
Gohir.D08G265900 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.0e-22 112.5 297 31.3
Atru.chr7.1554 Acer truncatum HOM05D004448 ORTHO05D005919 2.3e-22 111.3 289 30.8
Carub.0008s1725 Capsella rubella HOM05D004448 ORTHO05D005919 8.6e-22 109.4 194 38.1
Medtr6g092500 Medicago truncatula HOM05D004448 ORTHO05D005919 1.5e-21 108.6 114 47.4
Hma1.2p1_0024F.1_g016070 Hydrangea macrophylla HOM05D004448 ORTHO05D005919 3.3e-21 107.5 98 54.1
Atru.chr7.1555 Acer truncatum HOM05D004448 ORTHO05D005919 4.3e-21 107.1 96 52.1
CARHR233700 Cardamine hirsuta HOM05D004448 ORTHO05D015948 1.2e-20 105.5 508 24.6
SalBow1G6253 Salvia bowleyana HOM05D004448 ORTHO05D005919 4.7e-20 103.6 142 40.1
Pp3c5_7060 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.3e-17 95.5 187 33.2
AT4G26170 Arabidopsis thaliana HOM05D004448 ORTHO05D015948 1.4e-16 92.0 243 30.0
AL7G26800 Arabidopsis lyrata HOM05D004448 ORTHO05D015948 1.9e-16 91.7 274 28.5
Carub.0007s1478 Capsella rubella HOM05D004448 ORTHO05D015948 1.6e-15 88.6 397 30.7
RhsimUnG0032400 Rhododendron simsii HOM05D004448 ORTHO05D005919 2.7e-15 87.8 289 26.6
Glyma.01G003300 Glycine max HOM05D004448 ORTHO05D005919 1.5e-13 82.0 105 44.8
Medtr6g092480 Medicago truncatula HOM05D012533 ORTHO05D264910 1.5e-13 82.0 69 55.1
Sp7g24190 Schrenkiella parvula HOM05D004448 ORTHO05D015948 9.5e-13 79.3 274 27.7
BraA01t01701Z Brassica rapa HOM05D004448 ORTHO05D015948 2.8e-12 77.8 217 41.0
CBR_g20264 Chara braunii HOM05D000505 ORTHO05D000301 2.3e-11 74.7 137 35.0
FvH4_1g07231 Fragaria vesca HOM05D004448 ORTHO05D005919 8.9e-11 72.8 107 43.0
Thhalv10025245m.g Eutrema salsugineum HOM05D004448 ORTHO05D015948 2.6e-10 71.2 109 36.7
Aa31LG3G540 Aethionema arabicum HOM05D001256 ORTHO05D001141 5.8e-10 70.1 203 28.1
BcaNung02444 Brassica carinata HOM05D004448 ORTHO05D015948 5.4e-08 63.5 98 34.7
BcaC09g50676 Brassica carinata HOM05D004448 ORTHO05D015948 6.6e-06 56.6 259 33.2
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 6.6e-06 56.6 259 33.2
A01p17460 Brassica napus HOM05D004448 ORTHO05D015948 8.6e-06 56.2 111 35.1


User provided reference genes

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