Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4094 Papaver somniferum HOM05D005536 ORTHO05D006999 5.1e-304 1047.0 543 100.0
PSO017G0725 Papaver somniferum HOM05D005536 ORTHO05D006999 1.1e-285 986.1 514 99.0
TAR376G0002 Trochodendron aralioides HOM05D005536 ORTHO05D006999 1.6e-225 786.2 500 79.6
Hma1.2p1_1108F.1_g257740 Hydrangea macrophylla HOM05D005536 ORTHO05D006999 3.1e-224 781.9 498 79.9
Dinv19387 Davidia involucrata HOM05D005536 ORTHO05D006999 2.2e-222 775.8 495 79.8
Aqoxy5G01212 Aquilegia oxysepala HOM05D005536 ORTHO05D006999 2.9e-222 775.4 497 80.7
MBI06_g20964_MAGBIO Magnolia biondii HOM05D005536 ORTHO05D006999 7.8e-220 767.3 512 77.9
GSVIVG01023338001 Vitis vinifera HOM05D005536 ORTHO05D006999 5.6e-218 761.1 489 78.9
QL02p099453 Quercus lobata HOM05D005536 ORTHO05D006999 7.3e-218 760.8 523 74.6
Manes.10G122900 Manihot esculenta HOM05D005536 ORTHO05D006999 6.9e-216 754.2 513 74.5
DCAR_025347 Daucus carota HOM05D005536 ORTHO05D006999 4.9e-214 748.0 514 75.3
PGSC0003DMG401023772 Solanum tuberosum HOM05D005536 ORTHO05D006999 3.2e-213 745.3 493 78.1
Nn1g08381 Nelumbo nucifera HOM05D005536 ORTHO05D006999 4.2e-213 745.0 520 75.0
Prupe.1G573200 Prunus persica HOM05D005536 ORTHO05D006999 7.1e-213 744.2 509 74.1
Ciclev10000782m.g Citrus clementina HOM05D005536 ORTHO05D006999 1.2e-212 743.4 512 74.2
Haze_01749 Corylus avellana HOM05D005536 ORTHO05D006999 2.1e-212 742.7 496 76.0
Rhsim11G0127400 Rhododendron simsii HOM05D005536 ORTHO05D006999 2.1e-212 742.7 500 75.6
CiPaw.05G049900 Carya illinoinensis HOM05D005536 ORTHO05D006999 2.7e-212 742.3 496 76.0
DCAR_006692 Daucus carota HOM05D005536 ORTHO05D006999 2.7e-212 742.3 506 73.5
CAN.G798.23 Capsicum annuum HOM05D005536 ORTHO05D006999 3.5e-212 741.9 508 76.2
Solyc01g103950.4 Solanum lycopersicum HOM05D005536 ORTHO05D006999 4.6e-212 741.5 517 75.2
Peaxi162Scf00011g00635 Petunia axillaris HOM05D005536 ORTHO05D006999 1.8e-211 739.6 506 76.1
Lj5A254G85 Lonicera japonica HOM05D005536 ORTHO05D006999 3.0e-211 738.8 510 74.3
Nitab4.5_0000948g0240 Nicotiana tabacum HOM05D005536 ORTHO05D006999 5.1e-211 738.0 509 76.2
Sopen01g046340 Solanum pennellii HOM05D005536 ORTHO05D006999 8.7e-211 737.3 517 75.0
CANSAT11G0651 Cannabis sativa HOM05D005536 ORTHO05D006999 1.1e-210 736.9 491 75.8
HanXRQChr16g0512011 Helianthus annuus HOM05D005536 ORTHO05D006999 1.9e-210 736.1 500 75.0
Thecc.02G089300 Theobroma cacao HOM05D005536 ORTHO05D006999 3.3e-210 735.3 507 73.8
Duzib132G1177 Durio zibethinus HOM05D005536 ORTHO05D006999 7.4e-210 734.2 493 73.2
Cfa005500 Carpinus fangiana HOM05D005536 ORTHO05D006999 1.3e-209 733.4 513 72.7
Gohir.A13G035900 Gossypium hirsutum HOM05D005536 ORTHO05D006999 2.1e-209 732.6 512 73.2
Oeu049828.1 Olea europaea HOM05D005536 ORTHO05D006999 6.2e-209 731.1 502 75.1
Cc02_g22780 Coffea canephora HOM05D005536 ORTHO05D006999 1.1e-208 730.3 490 76.1
VMungo0540G0609 Vigna mungo HOM05D005536 ORTHO05D006999 1.1e-208 730.3 507 72.2
Psat1g222160 Pisum sativum HOM05D005536 ORTHO05D006999 1.8e-208 729.6 504 72.0
RcHm_v2.0_Chr7g0221201 Rosa chinensis HOM05D005536 ORTHO05D006999 3.1e-208 728.8 499 73.7
TPR.G2082 Trifolium pratense HOM05D005536 ORTHO05D006999 3.1e-208 728.8 490 73.9
ECA236G1742 Erigeron canadensis HOM05D005536 ORTHO05D006999 1.2e-207 726.9 496 74.0
FAN08G1062 Fragaria x ananassa HOM05D005536 ORTHO05D006999 1.2e-207 726.9 501 73.5
Ca_00061_v3 Cicer arietinum L. HOM05D005536 ORTHO05D006999 1.5e-207 726.5 490 73.9
Eucgr.G00559 Eucalyptus grandis HOM05D005536 ORTHO05D006999 4.5e-207 724.9 489 74.4
PGR042G3208 Punica granatum HOM05D005536 ORTHO05D006999 4.5e-207 724.9 513 73.3
Gohir.D13G034200 Gossypium hirsutum HOM05D005536 ORTHO05D006999 5.8e-207 724.5 512 72.5
Gorai.013G038700 Gossypium raimondii HOM05D005536 ORTHO05D006999 5.8e-207 724.5 512 72.3
FAN04G2224 Fragaria x ananassa HOM05D005536 ORTHO05D006999 1.3e-206 723.4 501 73.3
Potri.003G015700 Populus trichocarpa HOM05D005536 ORTHO05D006999 1.7e-206 723.0 513 72.7
Lsat_1_v5_gn_7_79100 Lactuca sativa HOM05D005536 ORTHO05D006999 2.2e-206 722.6 508 73.2
Lalb_Chr20g0123601 Lupinus albus HOM05D005536 ORTHO05D006999 3.8e-206 721.8 509 72.3
Lj6g0001247 Lotus japonicus HOM05D005536 ORTHO05D006999 4.9e-206 721.5 509 69.7
MSTRG.20308 Avicennia marina HOM05D005536 ORTHO05D006999 1.1e-205 720.3 502 73.5
FvH4_5g28860 Fragaria vesca HOM05D005536 ORTHO05D006999 1.4e-205 719.9 501 72.9
TWI59G0084 Tripterygium wilfordii HOM05D005536 ORTHO05D006999 2.5e-205 719.2 530 71.1
Glyma.08G188200 Glycine max HOM05D005536 ORTHO05D006999 4.2e-205 718.4 488 73.4
arahy.Tifrunner.gnm1.ann1.CHH5X5 Arachis hypogaea HOM05D005536 ORTHO05D006999 7.1e-205 717.6 493 74.2
AUR62003134 Chenopodium quinoa HOM05D005536 ORTHO05D006999 7.1e-205 717.6 505 73.3
Sabra03G0008600 Salix brachista HOM05D005536 ORTHO05D006999 1.2e-204 716.8 534 70.4
Glyma.12G169900 Glycine max HOM05D005536 ORTHO05D006999 2.1e-204 716.1 500 71.6
ClCG11G000890 Citrullus lanatus HOM05D005536 ORTHO05D006999 6.0e-204 714.5 529 69.9
FAN13G0194 Fragaria x ananassa HOM05D005536 ORTHO05D006999 6.0e-204 714.5 531 69.5
Medtr2g006350 Medicago truncatula HOM05D005536 ORTHO05D006999 7.9e-204 714.1 490 72.2
vmacro01743 Vaccinium macrocarpon HOM05D005536 ORTHO05D006999 7.9e-204 714.1 507 73.8
arahy.Tifrunner.gnm1.ann1.DFQ1AC Arachis hypogaea HOM05D005536 ORTHO05D006999 1.8e-203 713.0 493 73.6
SalBow8G1128 Salvia bowleyana HOM05D005536 ORTHO05D004100 8.7e-203 710.7 482 75.1
Atru.BG.35.p Acer truncatum HOM05D005536 ORTHO05D006999 1.1e-202 710.3 482 74.5
Phvul.006G216300 Phaseolus vulgaris HOM05D005536 ORTHO05D006999 1.1e-202 710.3 492 72.6
CSS0004244 Camellia sinensis var. sinensis HOM05D005536 ORTHO05D006999 3.3e-202 708.8 473 76.1
Migut.B00813 Erythranthe guttata HOM05D005536 ORTHO05D006999 9.6e-202 707.2 525 69.0
Sc18g0006730 Simmondsia chinensis HOM05D005536 ORTHO05D006999 6.2e-201 704.5 499 72.3
AT1G22940 Arabidopsis thaliana HOM05D005536 ORTHO05D006999 1.1e-200 703.7 503 72.6
C05p22080 Brassica napus HOM05D005536 ORTHO05D006999 2.4e-200 702.6 493 74.0
Sed0010884 Sechium edule HOM05D005536 ORTHO05D006999 3.1e-200 702.2 539 69.0
Ah.03g139170 Amaranthus hybridus HOM05D005536 ORTHO05D006999 4.0e-200 701.8 497 73.2
A09p41800 Brassica napus HOM05D005536 ORTHO05D006999 5.3e-200 701.4 493 73.8
BcaC05g26200 Brassica carinata HOM05D005536 ORTHO05D006999 1.5e-199 699.9 493 73.8
BolC5t30904H Brassica oleracea HOM05D005536 ORTHO05D006999 2.0e-199 699.5 493 73.6
AUR62007953 Chenopodium quinoa HOM05D005536 ORTHO05D006999 1.0e-198 697.2 477 74.6
MELO3C022605.2 Cucumis melo HOM05D005536 ORTHO05D006999 1.0e-198 697.2 494 70.9
Thhalv10007358m.g Eutrema salsugineum HOM05D005536 ORTHO05D006999 1.3e-198 696.8 490 73.7
Actinidia39023 Actinidia chinensis HOM05D005536 ORTHO05D006999 3.8e-198 695.3 485 74.2
Carub.0001s2244 Capsella rubella HOM05D005536 ORTHO05D006999 3.8e-198 695.3 491 73.3
AL1G36500 Arabidopsis lyrata HOM05D005536 ORTHO05D006999 8.4e-198 694.1 491 72.9
BraA09t39668Z Brassica rapa HOM05D005536 ORTHO05D006999 8.4e-198 694.1 496 73.0
BcaB07g32292 Brassica carinata HOM05D005536 ORTHO05D006999 2.5e-197 692.6 506 71.9
CsaV3_5G012850 Cucumis sativus L. HOM05D005536 ORTHO05D006999 2.5e-197 692.6 489 71.6
Zm00001eb138710 Zea mays HOM05D005536 ORTHO05D006999 7.1e-197 691.0 515 70.3
Sp1g20400 Schrenkiella parvula HOM05D005536 ORTHO05D006999 6.1e-196 688.0 513 70.2
CARHR023320 Cardamine hirsuta HOM05D005536 ORTHO05D006999 1.3e-195 686.8 493 72.0
ATR1136G209 Amborella trichopoda HOM05D005536 ORTHO05D006999 1.5e-194 683.3 488 71.7
MD15G1428400 Malus domestica HOM05D005536 ORTHO05D006999 2.2e-193 679.5 587 63.5
Aa31LG7G6950 Aethionema arabicum HOM05D005536 ORTHO05D006999 1.1e-192 677.2 491 70.7
unitig_749.g13511 Utricularia gibba HOM05D005536 ORTHO05D006999 5.9e-191 671.4 498 68.5
THA.LOC104806870 Tarenaya hassleriana HOM05D005536 ORTHO05D006999 2.2e-190 669.5 494 70.6
SEGI_00443 Sequoiadendron giganteum HOM05D005536 ORTHO05D006999 3.0e-187 659.1 521 65.1
COL.COLO4_11769 Corchorus olitorius HOM05D005536 ORTHO05D006999 1.1e-184 650.6 533 64.7
Atru.chr6.551 Acer truncatum HOM05D005536 ORTHO05D006999 8.5e-182 641.0 439 72.9
HPP92_027057 Vanilla planifolia HOM05D005536 ORTHO05D006999 1.8e-179 633.3 517 64.0
SGA_v2.0_scaffold110G31339 Striga asiatica HOM05D005536 ORTHO05D006999 1.8e-176 623.2 623 55.9
Nitab4.5_0002698g0120 Nicotiana tabacum HOM05D005536 ORTHO05D006999 7.2e-173 611.3 465 70.3
HPP92_011418 Vanilla planifolia HOM05D005536 ORTHO05D006999 7.4e-170 601.3 484 64.7
Pp3c1_39340 Physcomitrium patens HOM05D005536 ORTHO05D006999 4.1e-168 595.5 494 60.7
Mapoly0071s0067 Marchantia polymorpha HOM05D005536 ORTHO05D006999 1.8e-163 580.1 512 59.8
FAN18G3948 Fragaria x ananassa HOM05D005536 ORTHO05D006999 9.1e-160 567.8 393 72.0
SMO244G0051 Selaginella moellendorffii HOM05D005536 ORTHO05D006999 3.2e-157 559.3 492 60.0
CDE04G3554 Ceratophyllum demersum HOM05D005536 ORTHO05D006999 3.0e-155 552.7 497 59.2
Hma1.2p1_1108F.1_g257730 Hydrangea macrophylla HOM05D005536 ORTHO05D006999 2.4e-144 516.5 323 80.8
Hma1.2p1_3213F.1_g334040 Hydrangea macrophylla HOM05D005536 ORTHO05D006999 3.0e-134 483.0 358 72.1
AagrBONN_evm.TU.Sc2ySwM_228.4801 Anthoceros agrestis HOM05D005536 ORTHO05D006999 2.4e-128 463.4 414 59.2
Cre08.g365600 Chlamydomonas reinhardtii HOM05D005536 ORTHO05D006999 1.7e-110 404.1 565 44.1
Hund15496 Selenicereus undatus HOM05D005536 ORTHO05D006999 1.2e-103 381.3 260 72.3
Zm00001eb264810 Zea mays HOM05D005536 ORTHO05D006999 2.8e-100 370.2 261 71.3
CsaV3_5G012700 Cucumis sativus L. HOM05D005536 ORTHO05D006999 3.1e-75 287.0 370 45.9
MD08G1236400 Malus domestica HOM05D005536 ORTHO05D006999 1.1e-72 278.5 280 55.4
Actinidia00197 Actinidia chinensis HOM05D005536 ORTHO05D006999 2.0e-69 267.7 460 39.3
Cpa.g.c34456.1 Carica papaya HOM05D005536 ORTHO05D006999 9.7e-69 265.4 174 75.9
Ca_00038_v3 Cicer arietinum L. HOM05D005536 ORTHO05D006999 6.3e-68 262.7 189 66.1
PGR044G0806 Punica granatum HOM05D005536 ORTHO05D006999 1.4e-59 235.0 153 78.4
Cpa.g.sc31.109 Carica papaya HOM05D005536 ORTHO05D006999 8.5e-57 225.7 149 74.5
CBR_g6347 Chara braunii HOM05D000019 ORTHO05D000800 1.9e-56 224.6 254 47.2
Actinidia27730 Actinidia chinensis HOM05D005536 ORTHO05D006999 1.3e-52 211.8 137 72.3
Cpa.g.sc31.106 Carica papaya HOM05D005536 ORTHO05D006999 1.9e-48 198.0 134 76.1
MD15G1428300 Malus domestica HOM05D005536 ORTHO05D006999 3.4e-45 187.2 149 69.1
EL10Ac6g14966 Beta vulgaris HOM05D005536 ORTHO05D006999 5.4e-43 179.9 125 72.0
Actinidia27729 Actinidia chinensis HOM05D005536 ORTHO05D006999 4.5e-42 176.8 156 59.6
CBR_g6345 Chara braunii HOM05D005536 ORTHO05D006999 8.5e-41 172.6 148 60.8
CSS0010000 Camellia sinensis var. sinensis HOM05D005536 ORTHO05D006999 2.7e-34 151.0 142 60.6
CSS0024456 Camellia sinensis var. sinensis HOM05D005536 ORTHO05D006999 2.7e-34 151.0 142 60.6
Os12g0192500 Oryza sativa ssp. japonica HOM05D005536 ORTHO05D006999 1.7e-33 148.3 97 75.3
Actinidia02850 Actinidia chinensis HOM05D005536 ORTHO05D006999 2.5e-32 144.4 302 36.1
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 5.6e-32 143.3 198 43.9
CsaV3_5G012690 Cucumis sativus L. HOM05D005536 ORTHO05D006999 1.4e-30 138.7 171 48.0
MD08G1236300 Malus domestica HOM05D005536 ORTHO05D006999 1.2e-29 135.6 126 61.9
Cpa.g.sc31.103 Carica papaya HOM05D005536 ORTHO05D006999 2.7e-26 124.4 119 54.6
ECA236G5131 Erigeron canadensis HOM05D005536 ORTHO05D006999 6.0e-18 96.7 62 75.8
Actinidia02848 Actinidia chinensis HOM05D005536 ORTHO05D006999 3.0e-17 94.4 78 65.4
Haze_27076 Corylus avellana HOM05D005536 ORTHO05D006999 3.9e-17 94.0 189 35.4
COL.COLO4_00968 Corchorus olitorius HOM05D005536 ORTHO05D155286 5.6e-16 90.1 198 30.8
Actinidia27731 Actinidia chinensis HOM05D005536 ORTHO05D006999 1.4e-14 85.5 81 64.2
Cpa.g.sc31.102 Carica papaya HOM05D005536 ORTHO05D006999 1.2e-13 82.4 112 49.1
CARHR153920 Cardamine hirsuta HOM05D005536 ORTHO05D116486 7.3e-08 63.2 61 54.1
Medtr2g006225 Medicago truncatula HOM05D005536 ORTHO05D266164 8.9e-06 56.2 72 43.1


User provided reference genes

Program Settings