Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 1.1e-226 790.4 686 100.0
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 2.9e-211 739.2 683 96.2
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 1.6e-100 371.3 694 70.0
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 2.6e-95 354.0 699 68.2
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 3.0e-91 340.5 540 80.6
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 3.9e-91 340.1 678 69.2
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 8.7e-91 339.0 567 77.6
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.1e-88 332.0 685 68.0
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 3.1e-88 330.5 594 74.2
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 1.2e-87 328.6 649 70.0
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 4.5e-87 326.6 694 66.9
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 5.8e-87 326.2 694 66.9
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 7.6e-87 325.9 682 67.0
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 4.9e-86 323.2 683 66.9
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 8.4e-86 322.4 682 67.2
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 1.1e-85 322.0 694 66.4
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.4e-85 321.6 682 67.2
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 1.9e-85 321.2 700 66.3
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 3.2e-85 320.5 710 66.2
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 3.5e-84 317.0 694 66.4
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 4.6e-84 316.6 605 72.2
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 6.0e-84 316.2 665 68.9
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 7.9e-84 315.8 699 65.8
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 1.0e-83 315.5 688 66.1
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 1.3e-83 315.1 691 69.9
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 5.1e-83 313.2 613 71.1
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 6.7e-83 312.8 690 67.1
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 8.7e-83 312.4 679 66.9
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 2.5e-82 310.8 684 67.1
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 3.3e-82 310.5 679 66.3
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 7.4e-82 309.3 683 66.8
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 7.4e-82 309.3 691 66.3
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 9.7e-82 308.9 669 69.2
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 1.3e-81 308.5 627 71.8
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 1.1e-80 305.4 693 65.5
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 1.4e-80 305.1 572 74.0
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 4.1e-80 303.5 649 67.8
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 4.1e-80 303.5 674 66.6
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 5.3e-80 303.1 679 66.4
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 5.3e-80 303.1 673 66.9
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 6.9e-80 302.8 669 67.3
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 6.9e-80 302.8 690 65.8
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 2.6e-79 300.8 669 67.1
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 7.6e-79 299.3 681 66.2
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 7.6e-79 299.3 654 67.3
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 1.0e-78 298.9 704 63.8
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 1.7e-78 298.1 615 61.1
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 3.8e-78 297.0 637 70.8
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 5.0e-78 296.6 610 70.3
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 5.0e-78 296.6 541 75.8
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 8.5e-78 295.8 679 66.1
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 4.2e-77 293.5 677 66.6
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 5.5e-77 293.1 736 41.7
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 9.4e-77 292.4 678 64.6
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 2.1e-76 291.2 679 66.1
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 6.1e-76 289.7 663 67.0
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 1.0e-75 288.9 729 48.4
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 2.3e-75 287.7 684 65.2
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 3.9e-75 287.0 693 64.8
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 1.1e-74 285.4 548 75.9
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 2.5e-74 284.3 618 70.1
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 4.3e-74 283.5 640 67.7
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 9.7e-74 282.3 541 74.9
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 1.7e-73 281.6 685 64.7
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 1.7e-73 281.6 686 65.2
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 2.8e-73 280.8 671 65.6
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 4.8e-73 280.0 622 69.6
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 6.3e-73 279.6 530 77.0
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 3.1e-72 277.3 616 68.3
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 4.1e-72 276.9 695 64.0
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 6.9e-72 276.2 540 76.1
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 9.1e-72 275.8 648 66.0
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 1.2e-71 275.4 537 76.9
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 2.0e-71 274.6 679 66.7
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 2.6e-71 274.2 540 76.3
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 1.3e-70 271.9 658 65.7
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 1.3e-70 271.9 658 65.5
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 1.7e-70 271.6 674 66.2
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 2.9e-70 270.8 680 65.7
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 8.5e-70 269.2 564 72.9
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 8.5e-70 269.2 568 73.1
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 8.5e-70 269.2 564 72.9
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 1.1e-69 268.9 531 75.9
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 1.1e-69 268.9 564 72.9
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 1.9e-69 268.1 568 72.7
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 4.2e-69 266.9 537 76.0
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 9.4e-69 265.8 522 76.8
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 2.7e-68 264.2 682 64.5
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 2.0e-66 258.1 563 37.5
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 7.7e-63 246.1 679 52.0
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 2.3e-59 234.6 261 53.3
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.1e-58 232.3 247 53.0
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 2.6e-58 231.1 283 49.1
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 2.2e-57 228.0 595 63.0
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 3.8e-54 217.2 254 49.2
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 9.4e-53 212.6 179 60.9
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 1.4e-51 208.8 690 56.8
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 3.1e-48 197.6 144 64.6
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 8.8e-43 179.5 483 75.2
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 3.3e-37 161.0 103 70.9
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 4.0e-35 154.1 209 59.3
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 2.0e-34 151.8 117 61.5
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 2.7e-31 141.4 110 61.8
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 4.3e-29 134.0 155 44.5
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 4.3e-29 134.0 207 42.0
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 4.3e-29 134.0 143 49.7
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 1.2e-28 132.5 110 61.8
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 4.4e-26 124.0 80 75.0
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 4.9e-25 120.6 80 72.5
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 7.8e-23 113.2 114 52.6
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 4.4e-18 97.4 123 40.7
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 3.2e-16 91.3 117 42.7
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 7.0e-16 90.1 203 36.0
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 4.7e-12 77.4 71 90.1
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 1.1e-11 76.3 113 33.6
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 4.0e-11 74.3 173 34.7
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 6.8e-11 73.6 123 39.8


User provided reference genes

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