Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 1.3e-310 1068.9 543 100.0
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 4.3e-303 1043.9 543 97.8
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 1.1e-192 677.2 544 64.7
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 1.4e-179 633.6 544 61.0
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 8.6e-150 534.6 600 50.5
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 2.3e-147 526.6 557 52.8
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 1.2e-146 524.2 546 52.0
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 5.6e-141 505.4 543 49.9
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 2.8e-140 503.1 568 48.9
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 3.1e-139 499.6 541 51.2
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 5.2e-139 498.8 565 49.0
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 2.0e-138 496.9 546 50.7
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 3.4e-138 496.1 559 48.3
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 4.4e-138 495.7 558 49.1
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 4.4e-138 495.7 566 48.9
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 7.5e-138 495.0 562 49.3
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 9.8e-138 494.6 559 48.1
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 1.3e-137 494.2 564 48.6
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 6.4e-137 491.9 587 47.7
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 2.4e-136 490.0 543 50.1
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.2e-135 487.6 526 51.0
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 2.0e-135 486.9 710 43.0
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 2.3e-134 483.4 558 48.9
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 3.9e-134 482.6 543 50.6
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 5.0e-134 482.3 550 50.4
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 1.5e-133 480.7 545 50.1
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 2.5e-133 479.9 587 47.2
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 3.3e-133 479.6 490 53.5
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 3.3e-133 479.6 542 49.1
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 4.3e-133 479.2 585 47.9
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 7.3e-133 478.4 580 47.6
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 9.5e-133 478.0 566 47.5
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 9.5e-133 478.0 545 49.9
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 6.2e-132 475.3 558 48.7
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 8.1e-132 474.9 562 47.0
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 5.2e-131 472.2 542 48.7
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 2.6e-130 469.9 565 47.6
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 7.5e-130 468.4 578 48.1
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 9.8e-130 468.0 550 46.9
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 1.7e-129 467.2 565 46.9
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 1.6e-127 460.7 554 46.2
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 3.0e-126 456.4 546 46.2
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 6.6e-126 455.3 579 46.6
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 5.6e-125 452.2 611 42.2
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 3.6e-124 449.5 584 45.7
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 3.4e-122 443.0 554 46.0
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 9.9e-122 441.4 593 44.4
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 9.9e-122 441.4 565 44.1
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 2.2e-121 440.3 536 45.9
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 1.9e-120 437.2 562 43.8
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 3.2e-120 436.4 551 45.7
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 9.2e-120 434.9 526 47.9
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 1.6e-119 434.1 557 44.9
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 6.0e-119 432.2 555 44.1
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 3.0e-118 429.9 553 44.7
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 5.1e-118 429.1 529 47.4
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 2.5e-117 426.8 549 44.4
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 4.3e-117 426.0 670 39.7
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 1.2e-116 424.5 564 43.4
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 8.1e-116 421.8 559 43.5
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.1e-115 421.4 547 45.7
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 1.1e-115 421.4 574 43.9
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 1.1e-115 421.4 547 45.7
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 2.4e-115 420.2 472 50.2
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 3.1e-115 419.9 549 44.1
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 8.9e-115 418.3 537 45.4
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 1.2e-114 417.9 566 42.9
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 5.8e-114 415.6 490 50.0
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 9.9e-114 414.8 548 43.6
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 1.3e-113 414.5 545 43.5
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 1.3e-113 414.5 526 45.1
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 8.4e-113 411.8 559 44.5
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 1.1e-112 411.4 551 42.8
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 1.6e-111 407.5 556 43.9
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 3.5e-111 406.4 556 41.0
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.7e-110 404.1 518 45.6
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 1.1e-109 401.4 538 45.4
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 7.3e-109 398.7 548 43.1
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 2.1e-108 397.1 547 43.3
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 1.2e-106 391.3 550 43.6
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 2.6e-106 390.2 553 41.4
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 7.6e-106 388.7 580 42.4
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 1.2e-103 381.3 528 42.6
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 1.7e-102 377.5 563 40.9
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 1.7e-102 377.5 511 45.4
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 3.9e-102 376.3 482 44.4
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 3.3e-101 373.2 552 41.3
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 2.8e-100 370.2 495 44.6
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 1.1e-99 368.2 464 45.9
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 1.3e-84 318.2 399 47.4
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 2.8e-84 317.0 601 34.8
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 3.2e-80 303.5 334 46.1
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 7.4e-77 292.4 193 71.0
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.8e-76 290.4 405 43.0
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 1.4e-72 278.1 502 39.2
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 5.1e-70 269.6 441 39.9
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 4.8e-68 263.1 409 40.3
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 3.4e-66 256.9 472 35.6
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 5.0e-65 253.1 205 61.0
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 4.2e-64 250.0 475 35.6
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 6.7e-62 242.7 422 38.6
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 5.3e-59 233.0 545 33.2
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 3.3e-53 213.8 155 66.5
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.2e-52 211.1 155 65.8
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 3.1e-51 207.2 217 48.8
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 1.0e-49 202.2 352 39.8
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 1.9e-48 198.0 601 30.3
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 2.3e-38 164.5 610 27.4
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 5.2e-38 163.3 119 63.9
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 3.4e-37 160.6 137 58.4
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.7e-36 158.3 311 38.3
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 1.3e-33 148.7 121 62.0
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 5.0e-33 146.7 216 46.3
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 1.3e-25 122.1 83 77.1
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 9.2e-19 99.4 159 34.6
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 1.3e-17 95.5 192 30.7
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 9.8e-13 79.3 70 58.6
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.2e-11 74.3 65 56.9
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 9.5e-08 62.8 67 41.8


User provided reference genes

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