Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 4.8e-211 737.6 395 100.0
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 2.1e-169 599.4 420 81.4
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 3.8e-115 419.1 389 63.0
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 3.9e-112 409.1 372 65.9
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 8.8e-112 407.9 399 59.4
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 2.0e-111 406.8 374 61.8
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 2.6e-111 406.4 400 58.8
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 5.7e-111 405.2 376 60.1
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 7.4e-111 404.8 392 60.5
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.3e-110 404.1 388 63.7
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 1.7e-110 403.7 377 61.5
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.7e-110 403.7 374 65.8
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 8.2e-110 401.4 390 60.5
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 8.2e-110 401.4 400 61.8
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 8.2e-110 401.4 397 58.7
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 1.4e-109 400.6 413 59.8
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.4e-109 399.8 385 59.0
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.4e-109 399.8 385 59.0
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 3.1e-109 399.4 392 63.5
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 5.3e-109 398.7 389 60.7
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 9.1e-109 397.9 393 63.4
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 2.6e-108 396.4 401 58.9
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 2.6e-108 396.4 367 60.2
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 2.6e-108 396.4 405 61.5
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.5e-108 396.0 367 60.2
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 4.5e-108 395.6 396 62.1
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 1.0e-107 394.4 375 65.3
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 2.2e-107 393.3 414 57.5
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 2.2e-107 393.3 397 56.9
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 3.8e-107 392.5 386 59.1
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 5.0e-107 392.1 369 62.1
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 6.5e-107 391.7 382 59.4
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 2.5e-106 389.8 390 57.7
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 3.2e-106 389.4 428 54.7
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 5.5e-106 388.7 376 62.0
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 5.5e-106 388.7 372 64.0
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 9.4e-106 387.9 367 59.1
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.6e-105 387.1 412 58.7
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 2.1e-105 386.7 392 60.7
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 8.0e-105 384.8 389 60.2
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 1.0e-104 384.4 386 59.8
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.8e-104 383.6 405 56.8
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 3.0e-104 382.9 408 55.9
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 6.7e-104 381.7 378 61.1
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 1.2e-103 380.9 408 56.4
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 2.6e-103 379.8 382 61.0
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 3.3e-103 379.4 397 57.2
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 3.3e-103 379.4 425 53.9
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 4.4e-103 379.0 368 60.3
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 5.7e-103 378.6 378 60.6
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 1.3e-102 377.5 379 57.0
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 8.2e-102 374.8 380 57.4
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.4e-101 374.0 407 57.5
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 1.8e-101 373.6 384 56.8
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 2.4e-101 373.2 320 63.4
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 3.1e-101 372.9 379 61.2
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 7.0e-101 371.7 362 61.3
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 1.2e-100 370.9 373 59.5
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 5.9e-100 368.6 393 59.0
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 7.7e-100 368.2 374 58.3
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 1.0e-99 367.9 377 60.7
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 2.9e-99 366.3 481 50.9
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 5.0e-99 365.5 413 52.5
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 6.5e-99 365.2 381 54.6
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 8.5e-99 364.8 359 61.3
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 2.5e-98 363.2 396 56.1
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 2.5e-98 363.2 383 56.1
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 3.2e-98 362.8 379 59.9
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 3.2e-98 362.8 367 56.4
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 3.2e-98 362.8 367 56.4
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 5.5e-98 362.1 369 56.6
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 1.6e-97 360.5 381 54.1
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.6e-97 360.5 367 56.4
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 2.1e-97 360.1 366 56.0
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 2.1e-97 360.1 366 56.0
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 3.6e-97 359.4 310 62.9
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 1.4e-96 357.5 373 55.8
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 3.0e-96 356.3 371 56.6
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 6.8e-96 355.1 376 58.8
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 7.0e-93 345.1 276 66.7
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 2.7e-92 343.2 395 53.7
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 1.9e-90 337.0 301 63.5
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 3.6e-89 332.8 380 53.9
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 1.0e-88 331.3 282 66.0
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 1.4e-88 330.9 292 65.1
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 1.8e-88 330.5 307 61.2
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 5.2e-88 328.9 366 53.0
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 5.2e-88 328.9 232 72.8
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 7.5e-87 325.1 282 63.8
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 7.5e-87 325.1 422 49.3
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 9.8e-87 324.7 293 62.1
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.1e-85 321.2 290 62.4
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 3.1e-85 319.7 299 60.2
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 7.3e-82 308.5 408 51.7
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 7.3e-82 308.5 403 46.2
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 4.9e-78 295.8 295 56.3
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 4.6e-76 289.3 220 65.0
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 5.0e-75 285.8 341 52.5
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 8.0e-73 278.5 262 60.7
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 1.1e-69 268.1 261 54.4
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 7.3e-66 255.4 250 59.6
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 1.2e-65 254.6 370 48.1
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 2.2e-62 243.8 239 60.3
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 6.4e-62 242.3 364 44.0
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 8.3e-62 241.9 338 47.3
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 2.4e-61 240.4 254 56.7
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.8e-57 226.9 233 59.2
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 6.4e-54 215.7 199 61.8
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.8e-49 200.3 140 73.6
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 8.1e-49 198.7 159 62.9
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 4.0e-48 196.4 278 42.1
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 5.3e-48 196.1 243 46.1
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.6e-41 173.3 281 44.5
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 3.0e-35 153.7 191 40.8
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 9.0e-32 142.1 163 55.2
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 7.6e-31 139.0 155 57.4
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 8.4e-30 135.6 312 30.4
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 3.5e-20 103.6 194 30.4
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 1.3e-19 101.7 80 70.0
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.2e-15 88.6 168 35.7
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.2e-09 67.8 137 41.6
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 6.9e-08 62.8 85 49.4


User provided reference genes

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