Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 3.1e-266 921.4 515 100.0
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 2.0e-265 918.7 515 99.8
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 4.8e-203 711.4 432 80.1
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 1.1e-202 710.3 430 80.2
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 3.1e-202 708.8 432 79.9
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 1.2e-201 706.8 431 79.6
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 1.3e-200 703.4 426 80.5
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 8.6e-200 700.7 439 77.0
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 1.9e-199 699.5 438 77.9
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 2.5e-199 699.1 442 79.0
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 2.5e-199 699.1 437 79.6
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 2.5e-199 699.1 426 80.5
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 9.5e-199 697.2 433 78.5
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 9.5e-199 697.2 443 78.3
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 1.4e-197 693.3 427 78.7
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 1.4e-197 693.3 444 78.6
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 1.8e-197 693.0 439 78.6
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 2.3e-197 692.6 432 79.9
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 2.3e-197 692.6 439 78.1
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 5.2e-197 691.4 425 79.3
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 6.8e-197 691.0 432 79.9
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 8.9e-197 690.6 430 78.8
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 1.5e-196 689.9 422 79.6
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 2.6e-196 689.1 428 79.4
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 3.4e-196 688.7 428 78.5
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 5.7e-196 688.0 433 77.4
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 1.3e-195 686.8 430 80.0
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 1.3e-195 686.8 441 77.8
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 2.2e-195 686.0 433 77.1
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 2.2e-195 686.0 433 77.1
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 2.2e-195 686.0 441 77.8
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 4.9e-195 684.9 428 79.2
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 2.4e-194 682.6 425 78.1
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 2.4e-194 682.6 430 77.2
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 9.2e-194 680.6 432 77.8
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 9.2e-194 680.6 427 77.8
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 1.2e-193 680.2 440 76.4
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 2.7e-193 679.1 425 78.1
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 4.5e-193 678.3 427 77.3
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 4.5e-193 678.3 422 79.1
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 7.8e-193 677.6 421 79.1
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 1.3e-192 676.8 460 74.6
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 2.3e-192 676.0 427 77.3
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 2.3e-192 676.0 421 79.1
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 3.8e-192 675.2 425 78.4
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 6.6e-192 674.5 419 78.3
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 1.1e-191 673.7 432 77.8
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 1.1e-191 673.7 422 78.0
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 9.5e-191 670.6 473 71.7
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 9.5e-191 670.6 440 76.6
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 3.6e-190 668.7 444 75.2
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 8.0e-190 667.5 440 75.0
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 3.1e-189 665.6 442 75.3
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 8.9e-189 664.1 423 77.1
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 6.4e-187 657.9 426 77.2
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 1.4e-186 656.8 439 76.5
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 1.9e-186 656.4 427 75.9
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 1.9e-186 656.4 423 74.9
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 3.2e-186 655.6 428 76.2
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 4.1e-186 655.2 427 74.5
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 4.6e-185 651.7 440 72.5
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 1.7e-184 649.8 481 69.9
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 3.9e-184 648.7 446 73.5
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 1.9e-183 646.4 439 73.6
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 2.1e-182 642.9 427 72.8
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 2.8e-182 642.5 471 69.4
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 4.7e-182 641.7 421 76.2
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 1.8e-181 639.8 427 74.7
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 3.1e-181 639.0 412 76.9
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 1.5e-180 636.7 426 74.6
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 5.8e-180 634.8 434 72.6
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 1.7e-179 633.3 422 72.0
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 2.2e-179 632.9 429 72.5
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 3.7e-179 632.1 350 85.4
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 1.1e-178 630.6 423 74.2
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 3.2e-178 629.0 425 71.8
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 5.4e-178 628.2 420 73.1
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 9.2e-178 627.5 441 70.5
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 7.8e-177 624.4 427 71.9
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 5.1e-176 621.7 453 70.9
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 1.5e-175 620.2 431 70.8
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 3.3e-175 619.0 439 70.2
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 4.3e-175 618.6 420 72.9
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 7.3e-175 617.8 426 71.4
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 2.1e-174 616.3 439 69.9
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 1.1e-173 614.0 438 71.0
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 2.0e-172 609.8 379 78.4
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 2.0e-172 609.8 390 76.7
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 2.6e-172 609.4 428 71.0
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 4.4e-172 608.6 428 71.5
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 1.3e-171 607.1 440 68.6
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 1.7e-171 606.7 431 70.5
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 1.2e-169 600.5 433 69.1
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 1.0e-168 597.4 428 69.4
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 1.5e-167 593.6 394 76.4
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 3.6e-166 589.0 432 69.4
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 3.1e-165 585.9 391 72.6
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 2.6e-164 582.8 400 72.2
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 7.1e-162 574.7 437 67.3
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 1.0e-160 570.9 401 69.3
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 8.7e-160 567.8 423 67.4
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 1.8e-157 560.1 388 72.7
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 2.4e-157 559.7 427 65.6
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 6.9e-157 558.1 306 84.0
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 3.2e-154 549.3 316 82.3
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 7.3e-151 538.1 452 64.8
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 9.6e-151 537.7 376 73.1
MBI04_g46822_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 7.9e-145 518.1 359 71.6
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 6.0e-137 491.9 293 78.8
Sc01g0007900 Simmondsia chinensis HOM05D005140 ORTHO05D006288 1.5e-135 487.3 326 73.9
Os05g0392100 Oryza sativa ssp. japonica HOM05D005140 ORTHO05D006288 9.3e-130 468.0 342 71.3
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla HOM05D005140 ORTHO05D006288 1.2e-124 451.1 312 72.4
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 3.4e-124 449.5 437 54.7
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 5.1e-120 435.6 453 51.9
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 1.7e-118 430.6 355 60.3
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.7e-118 430.6 451 55.4
CDE12G0612 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 1.6e-113 414.1 311 63.3
SHI07711 Sapria himalayana HOM05D005140 ORTHO05D006288 5.3e-109 399.1 334 62.3
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 2.5e-106 390.2 218 80.7
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 2.7e-105 386.7 326 54.6
Oeu017029.1 Olea europaea HOM05D005140 ORTHO05D006288 4.5e-100 369.4 191 88.0
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 1.2e-87 328.2 402 47.5
Peaxi162Scf00715g00010 Petunia axillaris HOM05D005140 ORTHO05D006288 1.7e-83 314.3 228 70.2
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 2.5e-82 310.5 260 61.5
QL12p008508 Quercus lobata HOM05D005140 ORTHO05D006288 6.6e-51 206.1 172 65.1
Oeu062963.3 Olea europaea HOM05D005140 ORTHO05D006288 5.6e-50 203.0 263 50.2
Psat1g146680 Pisum sativum HOM05D005140 ORTHO05D006288 8.1e-49 199.1 112 83.0
Oeu017031.1 Olea europaea HOM05D005140 ORTHO05D006288 1.5e-47 194.9 136 72.8
MCO13G373 Micromonas commoda HOM05D005140 ORTHO05D006288 1.5e-34 151.8 316 32.3
Thecc.03G238400 Theobroma cacao HOM05D005140 ORTHO05D006288 2.6e-31 141.0 133 64.7
SEGI_19334 Sequoiadendron giganteum HOM05D005140 ORTHO05D000001 6.7e-27 126.3 78 76.9
MD10G1199900 Malus domestica HOM05D005140 ORTHO05D006288 1.5e-26 125.2 76 77.6
Cre07.g338400 Chlamydomonas reinhardtii HOM05D005140 ORTHO05D006288 2.8e-25 120.9 270 32.6
Cpa.g.c32337.2 Carica papaya HOM05D005140 ORTHO05D006288 4.0e-24 117.1 109 62.4
Cfa024662 Carpinus fangiana HOM05D005140 ORTHO05D006288 5.8e-23 113.2 320 29.4
GSVIVG01001794001 Vitis vinifera HOM05D005140 ORTHO05D006288 6.0e-20 103.2 81 63.0
DCAR_016064 Daucus carota HOM05D005140 ORTHO05D006288 2.6e-15 87.8 52 75.0
Gohir.A08G083762 Gossypium hirsutum HOM05D005140 ORTHO05D006288 3.7e-09 67.4 29 93.1


User provided reference genes

Program Settings