Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 0.0e+00 2888.2 1471 100.0
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 0.0e+00 2840.1 1469 98.4
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 0.0e+00 2141.3 1495 73.2
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 0.0e+00 2128.6 1495 73.0
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 0.0e+00 2124.0 1488 74.3
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 0.0e+00 2124.0 1496 72.6
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 0.0e+00 2116.3 1494 72.9
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 0.0e+00 2116.3 1495 72.0
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 0.0e+00 2114.0 1496 72.5
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 0.0e+00 2113.2 1496 72.5
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 0.0e+00 2108.6 1493 73.2
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 0.0e+00 2106.3 1498 72.3
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 0.0e+00 2101.6 1495 71.6
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 0.0e+00 2097.4 1488 73.5
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 0.0e+00 2095.5 1494 71.8
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 0.0e+00 2093.2 1499 71.9
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 0.0e+00 2089.7 1444 74.7
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2085.5 1495 72.1
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 0.0e+00 2081.6 1496 70.9
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 0.0e+00 2070.8 1496 70.8
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 0.0e+00 2056.6 1494 70.3
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2053.9 1481 71.8
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 0.0e+00 2047.3 1488 70.3
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 0.0e+00 2046.6 1495 70.6
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 0.0e+00 2045.4 1494 70.4
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 0.0e+00 2041.2 1494 69.7
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 0.0e+00 2038.1 1492 70.0
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 0.0e+00 2036.5 1496 70.6
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 0.0e+00 2035.4 1493 69.8
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 0.0e+00 2033.8 1495 69.6
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 0.0e+00 2031.1 1532 68.3
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 0.0e+00 2029.2 1550 68.2
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 0.0e+00 2022.7 1493 69.0
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 0.0e+00 2021.9 1491 69.3
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2021.1 1495 69.2
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 0.0e+00 2020.4 1494 69.2
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 0.0e+00 2020.0 1493 70.1
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 0.0e+00 2019.6 1531 68.4
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 0.0e+00 2018.8 1494 68.6
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 0.0e+00 2017.3 1488 69.8
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 0.0e+00 2017.3 1494 68.3
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 0.0e+00 2015.0 1496 69.5
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 0.0e+00 2013.0 1495 68.7
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2009.2 1495 68.6
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 0.0e+00 2008.0 1493 68.7
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 0.0e+00 2008.0 1493 68.7
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2004.6 1498 68.4
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2003.8 1495 68.5
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 1999.9 1489 68.6
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 0.0e+00 1997.2 1493 68.6
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 0.0e+00 1994.5 1489 68.8
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 0.0e+00 1991.1 1497 68.5
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 0.0e+00 1983.4 1565 66.4
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 0.0e+00 1983.0 1493 68.7
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 0.0e+00 1980.3 1492 68.2
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 0.0e+00 1978.8 1492 68.0
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 0.0e+00 1973.7 1490 68.2
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 0.0e+00 1962.2 1552 66.2
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 0.0e+00 1958.7 1481 68.5
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 0.0e+00 1958.3 1493 67.9
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 0.0e+00 1951.4 1494 66.7
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 0.0e+00 1947.6 1498 68.1
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 0.0e+00 1944.1 1482 68.1
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 0.0e+00 1943.3 1483 68.1
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 0.0e+00 1942.2 1480 67.5
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 0.0e+00 1937.9 1488 67.0
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 0.0e+00 1937.5 1484 68.3
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 0.0e+00 1937.5 1488 67.0
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1935.2 1483 68.2
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1934.5 1482 67.8
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1932.1 1492 67.8
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 0.0e+00 1931.8 1493 66.5
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 0.0e+00 1931.8 1494 67.0
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 0.0e+00 1930.6 1489 67.3
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 0.0e+00 1930.2 1491 67.9
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1929.1 1482 67.6
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1929.1 1490 67.9
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 0.0e+00 1928.3 1497 66.4
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 0.0e+00 1926.4 1492 67.4
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 0.0e+00 1924.8 1494 67.5
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1924.4 1493 67.7
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 0.0e+00 1924.4 1482 67.1
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 0.0e+00 1924.1 1488 67.6
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 0.0e+00 1923.3 1482 67.3
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1921.4 1480 67.5
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 1918.7 1490 67.0
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 0.0e+00 1917.9 1482 67.3
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 0.0e+00 1906.3 1505 66.6
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 0.0e+00 1864.4 1477 65.7
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 0.0e+00 1857.4 1479 65.1
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 0.0e+00 1845.1 1473 64.3
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 0.0e+00 1842.4 1455 66.8
Dinv10475 Davidia involucrata HOM05D001486 ORTHO05D004921 0.0e+00 1820.1 1306 72.4
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 0.0e+00 1819.3 1573 61.7
Gohir.A03G115400 Gossypium hirsutum HOM05D001486 ORTHO05D004921 0.0e+00 1793.1 1307 71.8
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 0.0e+00 1775.0 1490 62.3
CiPaw.06G051900 Carya illinoinensis HOM05D001486 ORTHO05D004921 0.0e+00 1761.5 1307 70.4
Dinv07730 Davidia involucrata HOM05D001486 ORTHO05D004921 0.0e+00 1758.4 1276 70.6
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 0.0e+00 1738.4 1593 60.1
A06p10890 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1713.0 1358 66.7
CAN.G601.2 Capsicum annuum HOM05D001486 ORTHO05D004921 0.0e+00 1699.5 1300 67.8
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 0.0e+00 1682.5 1439 60.8
Hma1.2p1_0277F.1_g111740 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 0.0e+00 1670.2 1394 65.3
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 0.0e+00 1638.6 1428 60.9
Hma1.2p1_0705F.1_g206910 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 0.0e+00 1632.5 1220 69.5
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 0.0e+00 1602.8 1440 59.5
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 0.0e+00 1569.3 1517 54.9
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 0.0e+00 1536.5 1526 54.7
TAR629G0611 Trochodendron aralioides HOM05D001486 ORTHO05D004921 0.0e+00 1506.5 988 76.7
Zm00001eb399840 Zea mays HOM05D001486 ORTHO05D004921 0.0e+00 1335.5 1220 58.4
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 0.0e+00 1322.0 1417 53.6
Lj1g0014898 Lotus japonicus HOM05D001486 ORTHO05D004921 0.0e+00 1295.8 1083 64.5
AagrBONN_evm.TU.Sc2ySwM_362.1455 Anthoceros agrestis HOM05D001486 ORTHO05D004921 0.0e+00 1281.5 1297 53.7
Nitab4.5_0004576g0040 Nicotiana tabacum HOM05D001486 ORTHO05D004921 0.0e+00 1211.4 1360 51.4
Nitab4.5_0010421g0010 Nicotiana tabacum HOM05D001486 ORTHO05D004921 0.0e+00 1152.5 1364 49.7
GSVIVG01011662001 Vitis vinifera HOM05D001486 ORTHO05D004921 1.8e-306 1056.6 733 74.8
Peaxi162Scf01152g00010 Petunia axillaris HOM05D001486 ORTHO05D004921 6.1e-291 1005.0 1274 47.9
SEGI_07920 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 1.1e-284 984.2 852 59.7
MD16G1018500 Malus domestica HOM05D001486 ORTHO05D004921 4.2e-276 955.7 748 64.2
unitig_27.g25159 Utricularia gibba HOM05D001486 ORTHO05D004921 6.6e-237 825.5 706 62.7
Peaxi162Scf00047g00710 Petunia axillaris HOM05D001486 ORTHO05D004921 1.6e-235 820.8 774 57.1
CDE06G1861 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 1.5e-233 814.3 578 69.9
Peaxi162Scf01152g00113 Petunia axillaris HOM05D001486 ORTHO05D004921 2.1e-206 724.2 916 47.9
CDE06G1153 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 1.0e-205 721.8 598 63.2
unitig_27.g25160 Utricularia gibba HOM05D001486 ORTHO05D004921 3.9e-189 666.8 610 58.4
TAR629G0795 Trochodendron aralioides HOM05D001486 ORTHO05D004921 1.2e-177 628.6 439 77.2
Carub.0127s0003 Capsella rubella HOM05D001486 ORTHO05D004921 3.9e-173 613.6 881 41.9
GSVIVG01011661001 Vitis vinifera HOM05D001486 ORTHO05D004921 1.5e-172 611.7 368 78.5
ECA247G0951 Erigeron canadensis HOM05D001486 ORTHO05D004921 1.3e-155 555.4 737 44.5
MD16G1018600 Malus domestica HOM05D001486 ORTHO05D004921 5.2e-149 533.5 480 61.7
AL1G32070 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 4.0e-141 507.3 467 58.5
RcHm_v2.0_Chr2g0167011 Rosa chinensis HOM05D001486 ORTHO05D004921 5.7e-132 476.9 558 50.5
CDE07G1854 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 7.5e-108 396.7 766 36.2
MCO15G435 Micromonas commoda HOM05D001486 ORTHO05D004921 8.1e-102 376.7 1770 24.7
PRCOL_00002396 Prasinoderma coloniale HOM05D001486 ORTHO05D004921 5.4e-98 364.0 1565 27.3
CDE07G0203 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 7.8e-97 360.1 441 49.0
MD16G1018800 Malus domestica HOM05D001486 ORTHO05D004921 3.4e-92 344.7 215 80.9
SEGI_12334 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 3.6e-86 324.7 338 55.6
SEGI_06977 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 2.7e-81 308.5 219 69.9
Cre09.g394350 Chlamydomonas reinhardtii HOM05D001486 ORTHO05D004921 6.2e-78 297.4 1781 23.9
AL1G32080 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 2.9e-75 288.5 229 65.5
vmacro04889 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 1.1e-74 286.6 247 63.2
vmacro09906 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 3.1e-69 268.5 274 56.9
Zm00001eb255180 Zea mays HOM05D001486 ORTHO05D004921 1.4e-66 259.6 195 66.2
CAN.G601.1 Capsicum annuum HOM05D001486 ORTHO05D004921 5.5e-66 257.7 152 76.3
FvH4_1g18130 Fragaria vesca HOM05D001486 ORTHO05D004921 9.7e-63 246.9 160 68.1
SGA_v2.0_scaffold23G10209 Striga asiatica HOM05D001486 ORTHO05D004921 6.5e-43 181.0 102 79.4
CSS0012816 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 6.1e-41 174.5 189 53.4
Pp3c3_36410 Physcomitrium patens HOM05D001486 ORTHO05D004921 1.5e-39 169.9 185 51.4
Cfa024881 Carpinus fangiana HOM05D005623 ORTHO05D007130 3.3e-39 168.7 1087 22.6
RcHm_v2.0_Chr2g0167021 Rosa chinensis HOM05D001486 ORTHO05D004921 1.7e-38 166.4 218 50.5
AL2G18360 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 4.5e-36 158.3 338 35.5
CARHR227050 Cardamine hirsuta HOM05D001486 ORTHO05D004921 2.9e-35 155.6 155 52.9
Zm00001eb201400 Zea mays HOM05D001486 ORTHO05D004921 2.6e-31 142.5 121 61.2
Zm00001eb235300 Zea mays HOM05D001486 ORTHO05D004921 2.8e-30 139.0 129 55.8
Rhsim12G0118300 Rhododendron simsii HOM05D001486 ORTHO05D004921 5.0e-27 128.3 101 67.3
BcaC09g49263 Brassica carinata HOM05D001486 ORTHO05D012131 1.8e-24 119.8 107 57.0
BcaC01g04114 Brassica carinata HOM05D001486 ORTHO05D012131 4.4e-23 115.2 102 57.8
SEGI_12550 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 1.3e-22 113.6 58 82.8
ClCG01G015310 Citrullus lanatus HOM05D001486 ORTHO05D004921 2.2e-22 112.8 56 87.5
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 1.0e-19 104.0 66 74.2
AL3G34910 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 2.0e-15 89.7 148 39.2
GSVIVG01026805001 Vitis vinifera HOM05D001486 ORTHO05D004921 2.9e-14 85.9 70 58.6
GSVIVG01001572001 Vitis vinifera HOM05D001486 ORTHO05D004921 2.0e-12 79.7 89 53.9
Hma1.2p1_0277F.1_g111730 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 5.9e-12 78.2 53 71.7
Hma1.2p1_0705F.1_g206905 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 5.9e-12 78.2 53 71.7
Zm00001eb334690 Zea mays HOM05D001486 ORTHO05D037216 1.8e-08 66.6 54 63.0
FvH4_4g10520 Fragaria vesca HOM05D002057 ORTHO05D004921 4.0e-08 65.5 34 76.5
SEGI_21189 Sequoiadendron giganteum HOM05D001486 ORTHO05D037216 4.4e-07 62.0 53 60.4
CSS0014875 Camellia sinensis var. sinensis HOM05D014252 ORTHO05D004921 5.8e-07 61.6 37 73.0
SMO306G0002 Selaginella moellendorffii HOM05D065592 ORTHO05D004921 1.7e-06 60.1 158 30.4
SMO270G0006 Selaginella moellendorffii HOM05D065592 ORTHO05D004921 2.9e-06 59.3 144 31.9


User provided reference genes

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