Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2449 Papaver somniferum HOM05D005824 ORTHO05D007029 0.0e+00 1133.6 578 100.0
PSO017G5895 Papaver somniferum HOM05D005824 ORTHO05D007029 1.3e-292 1009.2 620 85.6
PSO384G0570 Papaver somniferum HOM05D005824 ORTHO05D007029 3.4e-282 974.5 631 81.6
PSO339G3868 Papaver somniferum HOM05D005824 ORTHO05D007029 1.5e-277 959.1 632 80.9
TAR362G0448 Trochodendron aralioides HOM05D005824 ORTHO05D007029 8.2e-175 617.8 670 53.7
CSS0029355 Camellia sinensis var. sinensis HOM05D005824 ORTHO05D007029 8.5e-172 607.8 666 53.6
QL07p026733 Quercus lobata HOM05D005824 ORTHO05D007029 7.2e-171 604.7 670 52.8
GSVIVG01031305001 Vitis vinifera HOM05D005824 ORTHO05D007029 1.6e-170 603.6 667 52.6
CiPaw.10G020000 Carya illinoinensis HOM05D005824 ORTHO05D007029 6.1e-170 601.7 673 52.2
Dinv24497 Davidia involucrata HOM05D005824 ORTHO05D007029 3.3e-168 595.9 670 52.4
Aqoxy2G02580 Aquilegia oxysepala HOM05D005824 ORTHO05D007029 2.1e-162 576.6 663 50.4
Thecc.09G352900 Theobroma cacao HOM05D005824 ORTHO05D007029 5.2e-161 572.0 692 48.4
SalBow7G3942 Salvia bowleyana HOM05D005824 ORTHO05D007029 1.1e-160 570.9 625 52.0
Lj3g0001001 Lotus japonicus HOM05D005824 ORTHO05D007029 5.7e-160 568.5 712 47.9
Rhsim11G0099700 Rhododendron simsii HOM05D005824 ORTHO05D007029 9.7e-160 567.8 651 52.2
Nitab4.5_0009690g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.3e-159 567.4 672 50.6
COL.COLO4_11087 Corchorus olitorius HOM05D005824 ORTHO05D007029 1.7e-159 567.0 585 52.6
Cfa020078 Carpinus fangiana HOM05D005824 ORTHO05D007029 3.7e-159 565.8 671 51.1
Migut.B00860 Erythranthe guttata HOM05D005824 ORTHO05D007029 6.3e-159 565.1 606 51.7
Lj5g0026124 Lotus japonicus HOM05D005824 ORTHO05D007029 1.4e-158 563.9 713 48.0
Sopen01g044470 Solanum pennellii HOM05D005824 ORTHO05D007029 2.0e-157 560.1 672 50.0
Oeu061927.1 Olea europaea HOM05D005824 ORTHO05D007029 3.5e-157 559.3 709 48.1
Lalb_Chr02g0154321 Lupinus albus HOM05D005824 ORTHO05D007029 1.7e-156 557.0 719 46.6
Nn2g14227 Nelumbo nucifera HOM05D005824 ORTHO05D007029 1.7e-156 557.0 656 50.8
Gohir.A03G155800 Gossypium hirsutum HOM05D005824 ORTHO05D007029 2.2e-156 556.6 696 47.7
CAN.G1374.10 Capsicum annuum HOM05D005824 ORTHO05D007029 5.0e-156 555.4 670 49.3
Gorai.005G200700 Gossypium raimondii HOM05D005824 ORTHO05D007029 8.5e-156 554.7 710 46.8
PGSC0003DMG400018251 Solanum tuberosum HOM05D005824 ORTHO05D007029 1.1e-155 554.3 670 49.3
VMungo0720G2244 Vigna mungo HOM05D005824 ORTHO05D007029 1.1e-155 554.3 703 47.9
Manes.06G027100 Manihot esculenta HOM05D005824 ORTHO05D007029 7.2e-155 551.6 661 50.4
Atru.chr12.1601 Acer truncatum HOM05D005824 ORTHO05D007029 2.3e-153 546.6 698 48.0
arahy.Tifrunner.gnm1.ann1.S86EGP Arachis hypogaea HOM05D005824 ORTHO05D007029 4.0e-153 545.8 718 45.4
Lj5A322T66 Lonicera japonica HOM05D005824 ORTHO05D007029 4.0e-153 545.8 630 51.9
Sabra15G0009000 Salix brachista HOM05D005824 ORTHO05D007029 6.7e-153 545.0 737 45.7
Cpa.g.sc48.209 Carica papaya HOM05D005824 ORTHO05D007029 1.5e-152 543.9 666 48.0
Medtr1g055080 Medicago truncatula HOM05D005824 ORTHO05D007029 1.5e-152 543.9 712 48.0
Duzib168G0004 Durio zibethinus HOM05D005824 ORTHO05D007029 2.6e-152 543.1 582 51.9
MSTRG.15631 Avicennia marina HOM05D005824 ORTHO05D007029 5.7e-152 542.0 660 48.6
Ca_11665_v3 Cicer arietinum L. HOM05D005824 ORTHO05D007029 4.8e-151 538.9 673 48.6
arahy.Tifrunner.gnm1.ann1.E5V6X9 Arachis hypogaea HOM05D005824 ORTHO05D007029 6.3e-151 538.5 718 45.7
Glyma.02G192500 Glycine max HOM05D005824 ORTHO05D007029 2.0e-149 533.5 715 45.7
Potri.015G010900 Populus trichocarpa HOM05D005824 ORTHO05D007029 2.7e-149 533.1 721 46.0
TPR.G21237 Trifolium pratense HOM05D005824 ORTHO05D007029 2.7e-149 533.1 724 47.8
TPR.G12910 Trifolium pratense HOM05D005824 ORTHO05D007029 5.9e-149 531.9 715 47.3
MBI19_g32704_MAGBIO Magnolia biondii HOM05D005824 ORTHO05D007029 2.9e-148 529.6 724 46.4
CANSAT54G1845 Cannabis sativa HOM05D005824 ORTHO05D007029 9.4e-147 524.6 699 46.6
Psat6g118640 Pisum sativum HOM05D005824 ORTHO05D007029 2.7e-146 523.1 727 45.1
Gohir.D02G178900 Gossypium hirsutum HOM05D005824 ORTHO05D007029 6.1e-146 521.9 708 44.8
Glyma.10G084300 Glycine max HOM05D005824 ORTHO05D007029 1.8e-145 520.4 715 44.9
Cc02_g35570 Coffea canephora HOM05D005824 ORTHO05D007029 2.3e-145 520.0 768 43.1
Haze_20113 Corylus avellana HOM05D005824 ORTHO05D007029 6.8e-145 518.5 726 46.1
AUR62006798 Chenopodium quinoa HOM05D005824 ORTHO05D007029 1.5e-144 517.3 754 43.4
Sc09g0002470 Simmondsia chinensis HOM05D005824 ORTHO05D007029 2.0e-144 516.9 720 45.0
ClCG07G011770 Citrullus lanatus HOM05D005824 ORTHO05D007029 1.3e-143 514.2 669 46.8
vmacro01596 Vaccinium macrocarpon HOM05D005824 ORTHO05D007029 3.7e-143 512.7 636 48.7
ECA247G2466 Erigeron canadensis HOM05D005824 ORTHO05D007029 4.8e-143 512.3 634 47.6
SGA_v2.0_scaffold33G13450 Striga asiatica HOM05D005824 ORTHO05D007029 6.3e-143 511.9 692 44.5
TWI38G0226 Tripterygium wilfordii HOM05D005824 ORTHO05D007029 6.3e-143 511.9 655 47.6
AUR62000450 Chenopodium quinoa HOM05D005824 ORTHO05D007029 1.4e-142 510.8 763 43.6
Phvul.007G265900 Phaseolus vulgaris HOM05D005824 ORTHO05D007029 1.4e-142 510.8 713 44.7
MELO3C017799.2 Cucumis melo HOM05D005824 ORTHO05D007029 1.8e-142 510.4 671 46.2
CsaV3_4G002430 Cucumis sativus L. HOM05D005824 ORTHO05D007029 3.1e-142 509.6 671 46.2
Eucgr.B01798 Eucalyptus grandis HOM05D005824 ORTHO05D007029 7.0e-142 508.4 671 45.3
EL10Ac4g09532 Beta vulgaris HOM05D005824 ORTHO05D007029 2.3e-140 503.4 726 43.5
Nitab4.5_0000185g0360 Nicotiana tabacum HOM05D005824 ORTHO05D007029 3.8e-140 502.7 671 47.1
Hund21844 Selenicereus undatus HOM05D005824 ORTHO05D007029 5.5e-139 498.8 802 41.0
Prupe.6G306900 Prunus persica HOM05D005824 ORTHO05D007029 7.2e-139 498.4 703 44.8
Sed0007659 Sechium edule HOM05D005824 ORTHO05D007029 8.0e-138 495.0 673 44.1
THA.LOC104821746 Tarenaya hassleriana HOM05D005824 ORTHO05D007029 1.0e-137 494.6 732 43.2
Hma1.2p1_1243F.1_g269980 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 2.3e-137 493.4 524 55.9
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 5.2e-137 492.3 656 46.0
Peaxi162Scf00357g00429 Petunia axillaris HOM05D005824 ORTHO05D007029 5.2e-137 492.3 564 51.6
MD12G1202100 Malus domestica HOM05D005824 ORTHO05D007029 1.5e-136 490.7 696 44.1
RcHm_v2.0_Chr3g0458051 Rosa chinensis HOM05D005824 ORTHO05D007029 2.0e-136 490.3 704 45.2
MD04G1189300 Malus domestica HOM05D005824 ORTHO05D007029 2.6e-136 490.0 697 44.0
FvH4_6g08180 Fragaria vesca HOM05D005824 ORTHO05D007029 1.5e-131 474.2 695 43.2
FAN14G3202 Fragaria x ananassa HOM05D005824 ORTHO05D007029 3.3e-131 473.0 696 43.2
ATR0693G066 Amborella trichopoda HOM05D005824 ORTHO05D007029 4.3e-131 472.6 588 47.6
FAN09G3961 Fragaria x ananassa HOM05D005824 ORTHO05D007029 9.8e-128 461.5 693 42.9
CDE01G0540 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 1.9e-123 447.2 668 43.7
Carub.0006s2449 Capsella rubella HOM05D005824 ORTHO05D007029 4.0e-121 439.5 727 40.0
DCAR_005271 Daucus carota HOM05D005824 ORTHO05D007029 2.0e-120 437.2 675 41.9
Thhalv10003721m.g Eutrema salsugineum HOM05D005824 ORTHO05D007029 1.4e-118 431.0 735 39.0
unitig_748.g6998 Utricularia gibba HOM05D005824 ORTHO05D000260 7.0e-118 428.7 641 42.0
Aa31LG11G9880 Aethionema arabicum HOM05D005824 ORTHO05D007029 6.0e-117 425.6 726 39.8
Sp2g21220 Schrenkiella parvula HOM05D005824 ORTHO05D007029 1.7e-116 424.1 735 38.8
Lsat_1_v5_gn_9_78801 Lactuca sativa HOM05D005824 ORTHO05D007029 1.1e-115 421.4 566 46.8
CARHR186810 Cardamine hirsuta HOM05D005824 ORTHO05D007029 1.5e-115 421.0 738 38.1
AT5G26760 Arabidopsis thaliana HOM05D005824 ORTHO05D007029 2.5e-115 420.2 752 39.1
Ah.10g027060 Amaranthus hybridus HOM05D005824 ORTHO05D007029 3.6e-114 416.4 760 37.9
FAN05G5613 Fragaria x ananassa HOM05D005824 ORTHO05D007029 6.8e-113 412.1 688 40.6
HanXRQChr12g0362901 Helianthus annuus HOM05D005824 ORTHO05D007029 2.2e-111 407.1 585 43.9
Nitab4.5_0002783g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.1e-110 404.8 643 42.5
AL6G38630 Arabidopsis lyrata HOM05D005824 ORTHO05D007029 1.8e-105 387.5 859 34.1
FAN02G4519 Fragaria x ananassa HOM05D005824 ORTHO05D007029 3.4e-104 383.3 672 40.3
Ciclev10011677m.g Citrus clementina HOM05D005824 ORTHO05D007029 2.1e-101 374.0 358 55.6
BraA02t08872Z Brassica rapa HOM05D005824 ORTHO05D007029 2.1e-98 364.0 851 32.0
A02p39030 Brassica napus HOM05D005824 ORTHO05D007029 6.2e-98 362.5 850 32.4
BolC2t11924H Brassica oleracea HOM05D005824 ORTHO05D007029 2.9e-95 353.6 826 32.2
C02p58640 Brassica napus HOM05D005824 ORTHO05D007029 1.6e-93 347.8 822 32.1
BcaNung03676 Brassica carinata HOM05D005824 ORTHO05D007029 2.3e-92 344.0 599 39.6
C07p41490 Brassica napus HOM05D005824 ORTHO05D007029 7.3e-91 339.0 615 38.5
Os05g0134300 Oryza sativa ssp. japonica HOM05D005824 ORTHO05D007029 9.6e-91 338.6 722 36.7
PGR083G1123 Punica granatum HOM05D005824 ORTHO05D007029 6.4e-87 325.9 502 44.0
BolC7t44682H Brassica oleracea HOM05D005824 ORTHO05D007029 1.9e-86 324.3 652 36.8
BcaNung06222 Brassica carinata HOM05D005824 ORTHO05D007029 5.3e-81 306.2 821 30.8
Gohir.A08G201701 Gossypium hirsutum HOM05D005824 ORTHO05D007029 9.0e-81 305.4 596 37.8
Actinidia35501 Actinidia chinensis HOM05D005824 ORTHO05D007029 6.4e-79 299.3 585 37.8
HPP92_021934 Vanilla planifolia HOM05D005824 ORTHO05D007029 7.1e-70 269.2 321 47.0
SMO203G0090 Selaginella moellendorffii HOM05D005824 ORTHO05D007029 1.6e-66 258.1 583 32.1
Mapoly0075s0015 Marchantia polymorpha HOM05D005824 ORTHO05D007029 4.5e-64 250.0 710 28.6
Zm00001eb354720 Zea mays HOM05D005824 ORTHO05D007029 3.9e-60 236.9 627 32.9
Nitab4.5_0000185g0370 Nicotiana tabacum HOM05D005824 ORTHO05D007029 3.7e-58 230.3 275 46.2
Solyc01g101010.4 Solanum lycopersicum HOM05D005824 ORTHO05D007029 1.5e-56 224.9 268 49.6
SEGI_20129 Sequoiadendron giganteum HOM05D005824 ORTHO05D007029 2.0e-56 224.6 316 44.9
AagrBONN_evm.TU.Sc2ySwM_117.2728 Anthoceros agrestis HOM05D005824 ORTHO05D007029 1.1e-51 208.8 619 27.0
Hma1.2p1_1553F.1_g290340 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 5.9e-48 196.4 584 33.6
Pp3c6_10400 Physcomitrium patens HOM05D005824 ORTHO05D007029 4.7e-45 186.8 187 47.1
SGA_v2.0_scaffold438G51629 Striga asiatica HOM05D005824 ORTHO05D007029 1.0e-44 185.7 181 51.4
A06p36990 Brassica napus HOM05D005824 ORTHO05D007029 1.1e-38 165.6 176 46.6
BraA06t26625Z Brassica rapa HOM05D005824 ORTHO05D007029 1.1e-38 165.6 176 46.6
CBR_g20185 Chara braunii HOM05D005824 ORTHO05D007029 4.2e-38 163.7 446 28.5
Oeu060660.1 Olea europaea HOM05D005824 ORTHO05D007029 4.4e-35 153.7 124 62.1
Dinv30929 Davidia involucrata HOM05D005824 ORTHO05D007029 7.0e-33 146.4 122 65.6
HPP92_021933 Vanilla planifolia HOM05D005824 ORTHO05D007029 1.2e-29 135.6 240 37.5
Cfa020079 Carpinus fangiana HOM05D005824 ORTHO05D007029 4.1e-25 120.6 82 70.7
CANSAT54G0922 Cannabis sativa HOM05D005824 ORTHO05D007029 7.7e-24 116.3 212 41.5
Nitab4.5_0000185g0350 Nicotiana tabacum HOM05D005824 ORTHO05D007029 2.6e-19 101.3 98 57.1
CDE12G0845 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 1.3e-18 99.0 88 55.7
Zm00001eb056090 Zea mays HOM05D000739 ORTHO05D007029 1.7e-15 88.6 140 40.0
Zm00001eb289330 Zea mays HOM05D005824 ORTHO05D007029 2.5e-14 84.7 113 42.5
AUR62009842 Chenopodium quinoa HOM05D003327 ORTHO05D004535 1.2e-11 75.9 169 39.1


User provided reference genes

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