Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2767 Papaver somniferum HOM05D005564 ORTHO05D006872 1.2e-163 579.7 286 100.0
PSO063G5398 Papaver somniferum HOM05D005564 ORTHO05D006872 1.3e-117 426.8 231 87.9
PSO782G4004 Papaver somniferum HOM05D005564 ORTHO05D006872 6.6e-109 397.9 231 84.4
Manes.06G130000 Manihot esculenta HOM05D005564 ORTHO05D006872 3.1e-90 335.9 232 66.8
GSVIVG01024470001 Vitis vinifera HOM05D005564 ORTHO05D006872 2.6e-89 332.8 233 67.8
QL09p027441 Quercus lobata HOM05D005564 ORTHO05D006872 1.4e-87 327.0 234 65.0
TAR629G2772 Trochodendron aralioides HOM05D005564 ORTHO05D006872 1.4e-87 327.0 233 68.2
Cfa013601 Carpinus fangiana HOM05D005564 ORTHO05D006872 3.2e-87 325.9 234 65.8
CANSAT56G0249 Cannabis sativa HOM05D005564 ORTHO05D006872 1.6e-86 323.6 236 65.3
FvH4_7g26720 Fragaria vesca HOM05D005564 ORTHO05D006872 3.5e-86 322.4 234 62.4
Thecc.03G145600 Theobroma cacao HOM05D005564 ORTHO05D006872 3.5e-86 322.4 232 65.1
Potri.015G111628 Populus trichocarpa HOM05D005564 ORTHO05D006872 4.6e-86 322.0 233 66.5
Prupe.2G270700 Prunus persica HOM05D005564 ORTHO05D006872 1.7e-85 320.1 234 62.8
MD07G1243700 Malus domestica HOM05D005564 ORTHO05D006872 5.1e-85 318.5 235 62.6
TWI39G1038 Tripterygium wilfordii HOM05D005564 ORTHO05D006872 5.1e-85 318.5 228 64.5
Sabra15G0133100 Salix brachista HOM05D005564 ORTHO05D006872 6.6e-85 318.2 254 61.0
CiPaw.07G183300 Carya illinoinensis HOM05D005564 ORTHO05D006872 1.5e-84 317.0 227 64.3
Duzib084G1177 Durio zibethinus HOM05D005564 ORTHO05D006872 1.9e-84 316.6 257 61.5
TAR636G1392 Trochodendron aralioides HOM05D005564 ORTHO05D008130 4.3e-84 315.5 223 68.6
Nn6g33765 Nelumbo nucifera HOM05D005564 ORTHO05D006872 5.6e-84 315.1 232 66.8
MD07G1241800 Malus domestica HOM05D005564 ORTHO05D006872 7.3e-84 314.7 235 62.1
Gohir.A13G032000 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.1e-82 310.8 267 58.8
Gorai.001G052100 Gossypium raimondii HOM05D005564 ORTHO05D006872 1.1e-82 310.8 282 55.3
Haze_22223 Corylus avellana HOM05D005564 ORTHO05D006872 1.4e-82 310.5 226 64.6
Gorai.007G289400 Gossypium raimondii HOM05D005564 ORTHO05D006872 1.4e-82 310.5 267 57.3
Cpa.g.sc13.231 Carica papaya HOM05D005564 ORTHO05D006872 3.1e-82 309.3 230 63.9
Gohir.D07G048900 Gossypium hirsutum HOM05D005564 ORTHO05D006872 3.1e-82 309.3 267 56.6
Lj8A49G34 Lonicera japonica HOM05D005564 ORTHO05D006872 4.0e-82 308.9 239 61.5
CSS0008072 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 5.3e-82 308.5 235 60.4
Nitab4.5_0003973g0040 Nicotiana tabacum HOM05D005564 ORTHO05D006872 6.9e-82 308.1 233 61.8
Phvul.008G143300 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 6.9e-82 308.1 225 61.3
Glyma.01G079300 Glycine max HOM05D005564 ORTHO05D006872 1.2e-81 307.4 267 57.3
Migut.F00541 Erythranthe guttata HOM05D005564 ORTHO05D006872 1.5e-81 307.0 224 64.3
CAN.G309.23 Capsicum annuum HOM05D005564 ORTHO05D006872 2.0e-81 306.6 234 61.5
TPR.G39148 Trifolium pratense HOM05D005564 ORTHO05D006872 2.6e-81 306.2 227 62.1
Gorai.005G129900 Gossypium raimondii HOM05D005564 ORTHO05D006872 4.4e-81 305.4 267 56.9
Eucgr.A02932 Eucalyptus grandis HOM05D005564 ORTHO05D006872 5.8e-81 305.1 232 62.9
Phvul.005G030000 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 7.6e-81 304.7 250 58.8
VMungo1383G3643 Vigna mungo HOM05D005564 ORTHO05D006872 7.6e-81 304.7 250 55.2
Cc00_g13030 Coffea canephora HOM05D005564 ORTHO05D006872 1.3e-80 303.9 235 61.3
Hund18321 Selenicereus undatus HOM05D005564 ORTHO05D006872 2.9e-80 302.8 229 64.2
Sed0010204 Sechium edule HOM05D005564 ORTHO05D006872 8.4e-80 301.2 222 63.1
PGSC0003DMG400008328 Solanum tuberosum HOM05D005564 ORTHO05D006872 8.4e-80 301.2 233 59.7
Atru.chr6.1979 Acer truncatum HOM05D005564 ORTHO05D006872 1.1e-79 300.8 237 59.5
Atru.chr6.2007 Acer truncatum HOM05D005564 ORTHO05D006872 1.1e-79 300.8 237 59.5
CsaV3_5G005020 Cucumis sativus L. HOM05D005564 ORTHO05D006872 1.1e-79 300.8 232 60.3
Lalb_Chr19g0127411 Lupinus albus HOM05D005564 ORTHO05D006872 1.1e-79 300.8 234 58.5
Ciclev10032148m.g Citrus clementina HOM05D005564 ORTHO05D006872 1.9e-79 300.1 227 60.4
THA.LOC104825050 Tarenaya hassleriana HOM05D005564 ORTHO05D006872 2.4e-79 299.7 234 60.3
arahy.Tifrunner.gnm1.ann1.2T0BFY Arachis hypogaea HOM05D005564 ORTHO05D006872 4.2e-79 298.9 225 59.1
Medtr0053s0020 Medicago truncatula HOM05D005564 ORTHO05D006872 7.1e-79 298.1 234 59.4
HanXRQChr08g0221891 Helianthus annuus HOM05D005564 ORTHO05D006872 1.6e-78 297.0 237 59.9
Lj1g0017373 Lotus japonicus HOM05D005564 ORTHO05D006872 2.1e-78 296.6 226 60.6
Ah.08g213710 Amaranthus hybridus HOM05D005564 ORTHO05D006872 3.5e-78 295.8 237 60.3
FAN06G0976 Fragaria x ananassa HOM05D005564 ORTHO05D006872 3.5e-78 295.8 223 61.4
Hma1.2p1_1014F.1_g247960 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 3.5e-78 295.8 229 61.1
Hma1.2p1_1305F.1_g274526 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 3.5e-78 295.8 229 61.1
Aa31LG3G7670 Aethionema arabicum HOM05D005564 ORTHO05D006872 6.0e-78 295.0 230 60.9
Dinv34536 Davidia involucrata HOM05D005564 ORTHO05D006872 6.0e-78 295.0 222 63.1
AT5G51170 Arabidopsis thaliana HOM05D005564 ORTHO05D006872 7.9e-78 294.7 234 59.8
Sopen03g024760 Solanum pennellii HOM05D005564 ORTHO05D006872 7.9e-78 294.7 233 58.8
COL.COLO4_37310 Corchorus olitorius HOM05D005564 ORTHO05D006872 1.0e-77 294.3 204 65.7
vmacro19959 Vaccinium macrocarpon HOM05D005564 ORTHO05D006872 1.0e-77 294.3 233 61.8
FAN03G1301 Fragaria x ananassa HOM05D005564 ORTHO05D006872 1.3e-77 293.9 223 61.0
HanXRQChr08g0223121 Helianthus annuus HOM05D005564 ORTHO05D006872 1.3e-77 293.9 237 59.5
PGR042G2925 Punica granatum HOM05D005564 ORTHO05D006872 2.3e-77 293.1 225 60.4
SGA_v2.0_scaffold60G20845 Striga asiatica HOM05D005564 ORTHO05D006872 2.3e-77 293.1 257 56.0
CSS0031726 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 3.0e-77 292.7 228 60.1
ClCG01G004820 Citrullus lanatus HOM05D005564 ORTHO05D006872 3.0e-77 292.7 233 59.2
Carub.0008s1121 Capsella rubella HOM05D005564 ORTHO05D006872 3.9e-77 292.4 234 59.4
Solyc03g093880.3 Solanum lycopersicum HOM05D005564 ORTHO05D006872 3.9e-77 292.4 233 57.9
Thhalv10014247m.g Eutrema salsugineum HOM05D005564 ORTHO05D006872 8.7e-77 291.2 230 60.4
AL8G25430 Arabidopsis lyrata HOM05D005564 ORTHO05D006872 2.5e-76 289.7 243 59.7
SalBow3G4594 Salvia bowleyana HOM05D005564 ORTHO05D006872 2.5e-76 289.7 219 60.7
Sp6g13380 Schrenkiella parvula HOM05D005564 ORTHO05D006872 2.5e-76 289.7 237 59.1
BcaC04g20726 Brassica carinata HOM05D005564 ORTHO05D006872 2.1e-75 286.6 237 58.2
C09p39850 Brassica napus HOM05D005564 ORTHO05D006872 2.1e-75 286.6 237 58.2
BolC9t56884H Brassica oleracea HOM05D005564 ORTHO05D006872 2.1e-75 286.6 237 58.2
BraSC35t46004Z Brassica rapa HOM05D005564 ORTHO05D006872 2.1e-75 286.6 237 58.2
A10p07960 Brassica napus HOM05D005564 ORTHO05D006872 4.8e-75 285.4 237 57.8
CARHR256880 Cardamine hirsuta HOM05D005564 ORTHO05D006872 4.8e-75 285.4 234 59.4
Gohir.A07G044400 Gossypium hirsutum HOM05D005564 ORTHO05D006872 4.8e-75 285.4 258 54.3
BcaB08g35471 Brassica carinata HOM05D005564 ORTHO05D006872 8.1e-75 284.6 239 58.2
Ca_27086_v3 Cicer arietinum L. HOM05D005564 ORTHO05D006872 8.1e-75 284.6 217 63.1
MD01G1175500 Malus domestica HOM05D005564 ORTHO05D006872 1.4e-74 283.9 218 60.1
CDE02G1506 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 1.8e-74 283.5 233 55.8
MD07G1244900 Malus domestica HOM05D005564 ORTHO05D006872 4.0e-74 282.3 200 65.0
Oeu030874.1 Olea europaea HOM05D005564 ORTHO05D006872 3.4e-73 279.3 289 50.2
MSTRG.27230 Avicennia marina HOM05D005564 ORTHO05D006872 5.8e-73 278.5 273 52.0
ClCG09G010750 Citrullus lanatus HOM05D005564 ORTHO05D006872 9.9e-73 277.7 220 58.2
Gorai.013G121700 Gossypium raimondii HOM05D005564 ORTHO05D006872 9.9e-73 277.7 233 58.8
VMungo1080G0069 Vigna mungo HOM05D005564 ORTHO05D006872 1.3e-72 277.3 264 50.8
Zm00001eb249040 Zea mays HOM05D005564 ORTHO05D006872 8.4e-72 274.6 232 55.2
DCAR_020165 Daucus carota HOM05D005564 ORTHO05D006872 2.4e-71 273.1 230 57.8
Peaxi162Scf00073g01727 Petunia axillaris HOM05D005564 ORTHO05D006872 4.2e-71 272.3 231 55.0
ECA233G5472 Erigeron canadensis HOM05D005564 ORTHO05D006872 3.5e-70 269.2 219 58.9
EL10Ac7g17720 Beta vulgaris HOM05D005564 ORTHO05D006872 1.3e-69 267.3 327 44.3
SHI14145 Sapria himalayana HOM05D005564 ORTHO05D000001 2.5e-68 263.1 257 51.0
ATR0188G007 Amborella trichopoda HOM05D005564 ORTHO05D006872 6.2e-67 258.5 221 57.5
AUR62008825 Chenopodium quinoa HOM05D005564 ORTHO05D006872 1.4e-66 257.3 203 59.1
RcHm_v2.0_Chr1g0373311 Rosa chinensis HOM05D005564 ORTHO05D006872 4.0e-66 255.8 172 67.4
FAN10G0633 Fragaria x ananassa HOM05D005564 ORTHO05D006872 1.2e-65 254.2 174 65.5
Rhsim03G0157100 Rhododendron simsii HOM05D005564 ORTHO05D006872 1.5e-65 253.8 245 53.5
AUR62025416 Chenopodium quinoa HOM05D005564 ORTHO05D006872 7.6e-65 251.5 208 56.7
unitig_21.g20780 Utricularia gibba HOM05D005564 ORTHO05D006872 4.2e-63 245.7 198 58.1
MELO3C005454.2 Cucumis melo HOM05D005564 ORTHO05D006872 6.0e-62 241.9 172 65.1
FAN01G2799 Fragaria x ananassa HOM05D005564 ORTHO05D006872 3.7e-59 232.6 233 49.8
SEGI_35477 Sequoiadendron giganteum HOM05D005564 ORTHO05D006872 1.0e-53 214.5 276 42.8
Os02g0651000 Oryza sativa ssp. japonica HOM05D005564 ORTHO05D006872 1.5e-52 210.7 188 53.2
Nn6g32633 Nelumbo nucifera HOM05D005564 ORTHO05D006872 5.7e-52 208.8 163 62.0
MD07G1243300 Malus domestica HOM05D005564 ORTHO05D006872 1.3e-51 207.6 184 55.4
Sc19g0002740 Simmondsia chinensis HOM05D005564 ORTHO05D006872 1.4e-50 204.1 151 64.2
MD07G1245400 Malus domestica HOM05D005564 ORTHO05D006872 2.4e-50 203.4 149 65.1
Nitab4.5_0000103g0380 Nicotiana tabacum HOM05D005564 ORTHO05D006872 2.6e-49 199.9 150 63.3
AagrBONN_evm.TU.Sc2ySwM_228.2399 Anthoceros agrestis HOM05D005564 ORTHO05D006872 4.5e-49 199.1 223 44.4
Gorai.006G046400 Gossypium raimondii HOM05D005564 ORTHO05D006872 7.7e-49 198.4 194 53.1
Hma1.2p1_1014F.1_g247920 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 1.1e-47 194.5 179 56.4
Medtr0092s0090 Medicago truncatula HOM05D005564 ORTHO05D006872 2.7e-46 189.9 150 60.7
SMO145G0164 Selaginella moellendorffii HOM05D005564 ORTHO05D006872 1.1e-44 184.5 262 37.8
CANSAT78G0945 Cannabis sativa HOM05D005564 ORTHO05D006872 4.4e-44 182.6 304 38.5
Aqoxy3G02663 Aquilegia oxysepala HOM05D005564 ORTHO05D006872 7.2e-39 165.2 128 58.6
arahy.Tifrunner.gnm1.ann1.R6MN5Z Arachis hypogaea HOM05D005564 ORTHO05D006872 9.4e-39 164.9 217 39.6
CAN.G1016.1 Capsicum annuum HOM05D005564 ORTHO05D006872 2.7e-38 163.3 120 60.0
Gohir.D02G135666 Gossypium hirsutum HOM05D005564 ORTHO05D006872 6.1e-38 162.2 106 69.8
Pp3c13_1340 Physcomitrium patens HOM05D005564 ORTHO05D006872 6.1e-38 162.2 170 48.2
Prupe.4G133000 Prunus persica HOM05D005564 ORTHO05D006872 1.7e-35 154.1 170 47.6
CDE11G0070 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 2.2e-35 153.7 118 58.5
Rhsim03G0158000 Rhododendron simsii HOM05D005564 ORTHO05D006872 2.0e-33 147.1 203 41.4
Dinv34539 Davidia involucrata HOM05D005564 ORTHO05D006872 4.5e-33 146.0 204 40.7
Lsat_1_v5_gn_8_13861 Lactuca sativa HOM05D000071 ORTHO05D006872 6.5e-32 142.1 112 54.5
CBR_g31024 Chara braunii HOM05D005564 ORTHO05D006872 4.8e-27 125.9 232 34.5
Gohir.D02G130966 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.0e-24 118.2 148 45.3
Nn6g32636 Nelumbo nucifera HOM05D005564 ORTHO05D006872 4.2e-23 112.8 84 66.7
Psat3g164240 Pisum sativum HOM05D005564 ORTHO05D006872 1.1e-18 98.2 136 41.9
Psat3g166160 Pisum sativum HOM05D005564 ORTHO05D006872 1.4e-18 97.8 143 37.8
Mapoly0036s0004 Marchantia polymorpha HOM05D005564 ORTHO05D006872 2.5e-15 87.0 100 44.0
MCO11G677 Micromonas commoda HOM05D005564 ORTHO05D006872 9.5e-15 85.1 235 27.7
Cre01.g041900 Chlamydomonas reinhardtii HOM05D005564 ORTHO05D006872 1.8e-13 80.9 231 28.1
Aqoxy3G02664 Aquilegia oxysepala HOM05D000665 ORTHO05D000140 4.7e-06 56.2 34 70.6


User provided reference genes

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