Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401026315 Solanum tuberosum HOM05D003678 ORTHO05D004340 2.2e-196 688.7 334 100.0
Sopen08g002420 Solanum pennellii HOM05D003678 ORTHO05D004340 6.0e-162 574.3 328 85.7
Solyc08g006470.4 Solanum lycopersicum HOM05D003678 ORTHO05D004340 2.8e-159 565.5 326 85.3
CAN.G673.15 Capsicum annuum HOM05D003678 ORTHO05D004340 1.4e-142 510.0 355 73.8
Peaxi162Scf00045g01736 Petunia axillaris HOM05D003678 ORTHO05D004340 1.0e-140 503.8 350 72.3
Nitab4.5_0000555g0240 Nicotiana tabacum HOM05D003678 ORTHO05D004340 3.9e-137 491.9 365 68.5
Nitab4.5_0005481g0010 Nicotiana tabacum HOM05D003678 ORTHO05D004340 1.1e-134 483.8 366 67.8
CAN.G566.61 Capsicum annuum HOM05D003678 ORTHO05D004340 2.4e-134 482.6 364 68.1
Solyc12g096450.2 Solanum lycopersicum HOM05D003678 ORTHO05D004340 5.8e-133 478.0 364 66.2
Nitab4.5_0001110g0180 Nicotiana tabacum HOM05D003678 ORTHO05D004340 1.0e-132 477.2 372 66.7
PGSC0003DMG400029367 Solanum tuberosum HOM05D003678 ORTHO05D004340 3.8e-132 475.3 363 66.4
Peaxi162Scf00459g00837 Petunia axillaris HOM05D003678 ORTHO05D004340 5.0e-132 474.9 359 66.9
Sopen12g032280 Solanum pennellii HOM05D003678 ORTHO05D004340 8.4e-132 474.2 364 65.7
Dinv18146 Davidia involucrata HOM05D003678 ORTHO05D004340 1.8e-129 466.5 359 65.5
Cc08_g06430 Coffea canephora HOM05D003678 ORTHO05D004340 3.9e-129 465.3 362 65.5
Cc08_g06510 Coffea canephora HOM05D003678 ORTHO05D004340 3.9e-129 465.3 362 65.5
MSTRG.25776 Avicennia marina HOM05D003678 ORTHO05D004340 1.6e-127 459.9 358 64.5
Haze_21723 Corylus avellana HOM05D003678 ORTHO05D004340 1.1e-126 457.2 360 63.3
TAR626G0897 Trochodendron aralioides HOM05D003678 ORTHO05D004340 1.1e-126 457.2 361 63.7
Cfa013262 Carpinus fangiana HOM05D003678 ORTHO05D004340 5.3e-126 454.9 360 63.1
Dinv03491 Davidia involucrata HOM05D003678 ORTHO05D004340 6.9e-126 454.5 358 62.3
TAR626G0756 Trochodendron aralioides HOM05D003678 ORTHO05D004340 6.9e-126 454.5 361 62.9
CSS0027905 Camellia sinensis var. sinensis HOM05D003678 ORTHO05D004340 3.4e-125 452.2 359 63.0
Manes.03G003200 Manihot esculenta HOM05D003678 ORTHO05D004340 1.3e-124 450.3 358 63.7
SGA_v2.0_scaffold193G40661 Striga asiatica HOM05D003678 ORTHO05D004340 1.1e-123 447.2 358 62.3
AUR62009050 Chenopodium quinoa HOM05D003678 ORTHO05D004340 1.2e-122 443.7 359 61.0
Prupe.1G461000 Prunus persica HOM05D003678 ORTHO05D004340 1.2e-122 443.7 359 63.0
QL12p024946 Quercus lobata HOM05D003678 ORTHO05D004340 1.6e-122 443.4 359 60.4
vmacro05102 Vaccinium macrocarpon HOM05D003678 ORTHO05D004340 1.6e-122 443.4 358 62.0
FvH4_2g36910 Fragaria vesca HOM05D003678 ORTHO05D004340 3.6e-122 442.2 361 60.7
Eucgr.C04005 Eucalyptus grandis HOM05D003678 ORTHO05D004340 4.6e-122 441.8 361 60.9
FAN20G0096 Fragaria x ananassa HOM05D003678 ORTHO05D004340 7.9e-122 441.0 363 61.4
Hma1.2p1_0379F.1_g139790 Hydrangea macrophylla HOM05D003678 ORTHO05D004340 7.9e-122 441.0 359 61.0
Hma1.2p1_0891F.1_g233175 Hydrangea macrophylla HOM05D003678 ORTHO05D004340 7.9e-122 441.0 359 61.0
RcHm_v2.0_Chr6g0304871 Rosa chinensis HOM05D003678 ORTHO05D004340 7.9e-122 441.0 364 61.3
AUR62020613 Chenopodium quinoa HOM05D003678 ORTHO05D004340 1.0e-121 440.7 359 60.7
FAN15G2333 Fragaria x ananassa HOM05D003678 ORTHO05D004340 1.0e-121 440.7 361 61.5
Potri.006G275300 Populus trichocarpa HOM05D003678 ORTHO05D004340 1.8e-121 439.9 359 61.0
Duzib168G2376 Durio zibethinus HOM05D003678 ORTHO05D004340 3.9e-121 438.7 358 61.2
SalBow4G1160 Salvia bowleyana HOM05D003678 ORTHO05D004340 5.1e-121 438.3 359 61.3
Hund03284 Selenicereus undatus HOM05D003678 ORTHO05D004340 5.1e-121 438.3 358 61.5
TAR383G0531 Trochodendron aralioides HOM05D003678 ORTHO05D004340 8.8e-121 437.6 355 61.4
MBI16_g31785_MAGBIO Magnolia biondii HOM05D003678 ORTHO05D004340 1.1e-120 437.2 360 60.8
MD15G1108800 Malus domestica HOM05D003678 ORTHO05D004340 2.0e-120 436.4 359 61.8
Oeu040383.1 Olea europaea HOM05D003678 ORTHO05D004340 4.3e-120 435.3 359 62.7
TAR383G0188 Trochodendron aralioides HOM05D003678 ORTHO05D004340 9.7e-120 434.1 355 60.8
Ah.06g192800 Amaranthus hybridus HOM05D003678 ORTHO05D004340 2.2e-119 433.0 362 61.0
arahy.Tifrunner.gnm1.ann1.DFD6U9 Arachis hypogaea HOM05D003678 ORTHO05D004340 3.7e-119 432.2 360 61.4
Sabra06G0213100 Salix brachista HOM05D003678 ORTHO05D004340 3.7e-119 432.2 359 60.4
Thecc.09G006300 Theobroma cacao HOM05D003678 ORTHO05D004340 3.7e-119 432.2 357 60.8
Ciclev10008476m.g Citrus clementina HOM05D003678 ORTHO05D004340 1.1e-118 430.6 359 59.9
Glyma.11G172819 Glycine max HOM05D003678 ORTHO05D004340 1.1e-118 430.6 360 62.2
arahy.Tifrunner.gnm1.ann1.P9WJGS Arachis hypogaea HOM05D003678 ORTHO05D004340 1.4e-118 430.3 360 61.1
Ca_12869_v3 Cicer arietinum L. HOM05D003678 ORTHO05D004340 1.8e-118 429.9 360 60.6
Glyma.11G172610 Glycine max HOM05D003678 ORTHO05D004340 1.8e-118 429.9 360 61.9
Glyma.17G200200 Glycine max HOM05D003678 ORTHO05D004340 1.8e-118 429.9 360 62.2
CANSAT25G1292 Cannabis sativa HOM05D003678 ORTHO05D004340 4.1e-118 428.7 364 60.7
Migut.A00439 Erythranthe guttata HOM05D003678 ORTHO05D004340 5.3e-118 428.3 358 59.2
Lalb_Chr14g0362261 Lupinus albus HOM05D003678 ORTHO05D004340 5.3e-118 428.3 368 60.1
Glyma.17G189600 Glycine max HOM05D003678 ORTHO05D004340 9.1e-118 427.6 360 61.4
Cpa.g.sc23.4 Carica papaya HOM05D003678 ORTHO05D004340 1.5e-117 426.8 356 61.8
DCAR_000669 Daucus carota HOM05D003678 ORTHO05D004340 2.0e-117 426.4 351 62.1
PGR044G2213 Punica granatum HOM05D003678 ORTHO05D004340 3.4e-117 425.6 359 58.8
EL10Ac2g03738 Beta vulgaris HOM05D003678 ORTHO05D004340 5.9e-117 424.9 392 56.1
Gohir.A05G065000 Gossypium hirsutum HOM05D003678 ORTHO05D004340 7.7e-117 424.5 357 59.9
Gorai.009G068400 Gossypium raimondii HOM05D003678 ORTHO05D004340 1.0e-116 424.1 357 59.9
FAN27G1333 Fragaria x ananassa HOM05D003678 ORTHO05D004340 2.9e-116 422.5 358 59.5
Rhsim07G0170500 Rhododendron simsii HOM05D003678 ORTHO05D004340 3.8e-116 422.2 359 59.9
Lalb_Chr24g0402471 Lupinus albus HOM05D003678 ORTHO05D004340 6.5e-116 421.4 367 58.6
TWI63G1033 Tripterygium wilfordii HOM05D003678 ORTHO05D004340 8.5e-116 421.0 361 59.3
Gohir.D05G067600 Gossypium hirsutum HOM05D003678 ORTHO05D004340 1.4e-115 420.2 358 59.2
CiPaw.08G019100 Carya illinoinensis HOM05D003678 ORTHO05D004340 4.2e-115 418.7 357 60.5
PSO170G4284 Papaver somniferum HOM05D003678 ORTHO05D004340 7.2e-115 417.9 361 58.4
Potri.018G006300 Populus trichocarpa HOM05D003678 ORTHO05D004340 1.2e-114 417.2 359 59.6
Thhalv10025366m.g Eutrema salsugineum HOM05D003678 ORTHO05D004340 2.1e-114 416.4 352 58.8
CiPaw.07G213700 Carya illinoinensis HOM05D003678 ORTHO05D004340 7.9e-114 414.5 362 58.3
Aa31LG2G18930 Aethionema arabicum HOM05D003678 ORTHO05D004340 1.0e-113 414.1 351 57.3
HanXRQChr16g0504351 Helianthus annuus HOM05D003678 ORTHO05D004340 1.4e-113 413.7 342 61.1
GSVIVG01035534001 Vitis vinifera HOM05D003678 ORTHO05D004340 1.4e-113 413.7 339 60.8
Atru.chr7.2631 Acer truncatum HOM05D003678 ORTHO05D004340 2.3e-113 412.9 363 57.9
VMungo0647G0546 Vigna mungo HOM05D003678 ORTHO05D004340 2.3e-113 412.9 363 58.4
Carub.0007s0914 Capsella rubella HOM05D003678 ORTHO05D004340 3.0e-113 412.5 354 58.5
Lj5g0015114 Lotus japonicus HOM05D003678 ORTHO05D004340 3.0e-113 412.5 361 58.4
Actinidia03577 Actinidia chinensis HOM05D003678 ORTHO05D004340 3.9e-113 412.1 339 61.4
Medtr1g009770 Medicago truncatula HOM05D003678 ORTHO05D004340 1.1e-112 410.6 362 58.0
Zm00001eb226230 Zea mays HOM05D003678 ORTHO05D004340 1.5e-112 410.2 357 57.1
CDE02G2639 Ceratophyllum demersum HOM05D003678 ORTHO05D004340 2.6e-112 409.5 354 59.6
HanXRQChr16g0513211 Helianthus annuus HOM05D003678 ORTHO05D004340 2.6e-112 409.5 363 58.4
Aqoxy7G03011 Aquilegia oxysepala HOM05D003678 ORTHO05D004340 4.4e-112 408.7 358 57.8
Os06g0693500 Oryza sativa ssp. japonica HOM05D003678 ORTHO05D004340 9.7e-112 407.5 356 57.0
Phvul.001G058800 Phaseolus vulgaris HOM05D003678 ORTHO05D004340 1.7e-111 406.8 364 57.7
AL7G20640 Arabidopsis lyrata HOM05D003678 ORTHO05D004340 2.2e-111 406.4 354 58.2
CANSAT11G2609 Cannabis sativa HOM05D003678 ORTHO05D004340 1.1e-110 404.1 373 57.9
Sed0004467 Sechium edule HOM05D003678 ORTHO05D004340 4.1e-110 402.1 340 58.2
Gorai.001G001500 Gossypium raimondii HOM05D003678 ORTHO05D004340 9.1e-110 401.0 358 57.3
Sp7g29280 Schrenkiella parvula HOM05D003678 ORTHO05D004340 1.2e-109 400.6 352 57.4
Psat6g032480 Pisum sativum HOM05D003678 ORTHO05D004340 1.6e-109 400.2 360 58.1
Gohir.D07G001800 Gossypium hirsutum HOM05D003678 ORTHO05D004340 2.6e-109 399.4 358 56.7
HPP92_010767 Vanilla planifolia HOM05D003678 ORTHO05D004340 2.6e-109 399.4 367 56.7
Gohir.A07G001400 Gossypium hirsutum HOM05D003678 ORTHO05D004340 7.7e-109 397.9 358 57.0
ECA233G4849 Erigeron canadensis HOM05D003678 ORTHO05D004340 2.2e-108 396.4 357 56.9
BcaNung04590 Brassica carinata HOM05D003678 ORTHO05D004340 2.9e-108 396.0 354 57.3
PSO063G6534 Papaver somniferum HOM05D003678 ORTHO05D004340 3.8e-108 395.6 350 57.4
ClCG05G017500 Citrullus lanatus HOM05D003678 ORTHO05D004340 5.0e-108 395.2 340 58.2
HanXRQChr12g0384061 Helianthus annuus HOM05D003678 ORTHO05D004340 5.0e-108 395.2 353 58.1
unitig_32.g11644 Utricularia gibba HOM05D003678 ORTHO05D004340 5.0e-108 395.2 359 57.4
BcaC09g51921 Brassica carinata HOM05D003678 ORTHO05D004340 6.5e-108 394.8 355 56.3
C01p07630 Brassica napus HOM05D003678 ORTHO05D004340 6.5e-108 394.8 355 56.3
CARHR239300 Cardamine hirsuta HOM05D003678 ORTHO05D004340 2.5e-107 392.9 353 55.8
Lsat_1_v5_gn_6_15381 Lactuca sativa HOM05D003678 ORTHO05D004340 3.2e-107 392.5 358 56.1
MELO3C003636.2 Cucumis melo HOM05D003678 ORTHO05D004340 4.2e-107 392.1 341 58.1
BolC1t00743H Brassica oleracea HOM05D003678 ORTHO05D004340 1.6e-106 390.2 356 56.2
TPR.G12018 Trifolium pratense HOM05D003678 ORTHO05D004340 1.6e-106 390.2 394 52.5
CsaV3_3G047000 Cucumis sativus L. HOM05D003678 ORTHO05D004340 4.7e-106 388.7 344 57.6
THA.LOC104803597 Tarenaya hassleriana HOM05D003678 ORTHO05D004340 1.0e-105 387.5 362 55.5
Sed0010708 Sechium edule HOM05D003678 ORTHO05D004340 2.3e-105 386.3 343 57.1
Carub.0004s0384 Capsella rubella HOM05D003678 ORTHO05D004340 4.0e-105 385.6 350 56.3
AT2G24500 Arabidopsis thaliana HOM05D003678 ORTHO05D004340 5.2e-105 385.2 360 56.1
A01p06860 Brassica napus HOM05D003678 ORTHO05D004340 6.7e-105 384.8 353 54.4
Nn8g40427 Nelumbo nucifera HOM05D003678 ORTHO05D004340 6.7e-105 384.8 325 60.3
Thhalv10000189m.g Eutrema salsugineum HOM05D003678 ORTHO05D004340 1.1e-104 384.0 364 56.0
Aa31LG7G11470 Aethionema arabicum HOM05D003678 ORTHO05D004340 3.3e-104 382.5 364 55.5
BraA01t00637Z Brassica rapa HOM05D003678 ORTHO05D004340 5.7e-104 381.7 356 53.9
COL.COLO4_19043 Corchorus olitorius HOM05D003678 ORTHO05D004340 1.8e-102 376.7 323 59.1
Lsat_1_v5_gn_3_27981 Lactuca sativa HOM05D003678 ORTHO05D004340 4.1e-102 375.6 357 58.3
AT4G31420 Arabidopsis thaliana HOM05D003678 ORTHO05D004340 1.6e-101 373.6 355 54.9
AL4G14980 Arabidopsis lyrata HOM05D003678 ORTHO05D004340 2.0e-101 373.2 351 55.3
BcaB06g27975 Brassica carinata HOM05D003678 ORTHO05D004340 1.5e-99 367.1 360 54.7
CARHR117530 Cardamine hirsuta HOM05D003678 ORTHO05D004340 2.5e-99 366.3 355 54.1
Sp4g03510 Schrenkiella parvula HOM05D003678 ORTHO05D004340 3.2e-99 365.9 350 54.9
BraA09t41018Z Brassica rapa HOM05D003678 ORTHO05D004340 8.8e-97 357.8 350 53.1
SEGI_16726 Sequoiadendron giganteum HOM05D003678 ORTHO05D004340 2.6e-96 356.3 361 51.8
Sc09g0008090 Simmondsia chinensis HOM05D003678 ORTHO05D004340 7.5e-96 354.8 289 61.6
BcaC02g08448 Brassica carinata HOM05D003678 ORTHO05D004340 1.8e-94 350.1 366 51.9
BolC4t26963H Brassica oleracea HOM05D003678 ORTHO05D004340 1.8e-94 350.1 366 51.9
ATR0580G292 Amborella trichopoda HOM05D003678 ORTHO05D004340 5.4e-94 348.6 352 52.8
A09p56240 Brassica napus HOM05D003678 ORTHO05D004340 1.2e-93 347.4 363 51.0
C04p54110 Brassica napus HOM05D003678 ORTHO05D004340 1.6e-93 347.1 361 52.4
Nitab4.5_0004131g0030 Nicotiana tabacum HOM05D003678 ORTHO05D004340 4.5e-93 345.5 361 55.1
A04p18800 Brassica napus HOM05D003678 ORTHO05D004340 5.0e-92 342.0 359 51.5
BraA04t17489Z Brassica rapa HOM05D003678 ORTHO05D004340 5.0e-92 342.0 357 51.3
MD08G1131000 Malus domestica HOM05D003678 ORTHO05D004340 3.2e-91 339.3 285 59.3
Manes.16G136200 Manihot esculenta HOM05D003678 ORTHO05D004340 8.8e-89 331.3 350 53.4
Lj7A752T54 Lonicera japonica HOM05D003678 ORTHO05D004340 1.8e-86 323.6 337 54.3
Oeu018570.1 Olea europaea HOM05D003678 ORTHO05D004340 1.3e-84 317.4 301 53.8
BolC8t51492H Brassica oleracea HOM05D003678 ORTHO05D004340 1.2e-80 304.3 325 51.4
C08p39190 Brassica napus HOM05D003678 ORTHO05D004340 2.6e-80 303.1 321 51.7
BcaC07g40924 Brassica carinata HOM05D003678 ORTHO05D004340 3.2e-78 296.2 318 53.1
Medtr1g047010 Medicago truncatula HOM05D003678 ORTHO05D004340 6.2e-74 282.0 326 49.1
Mapoly0085s0044 Marchantia polymorpha HOM05D003678 ORTHO05D004340 2.0e-72 276.9 361 43.2
SMO143G0266 Selaginella moellendorffii HOM05D003678 ORTHO05D004340 1.4e-70 270.8 350 43.4
Pp3c2_4670 Physcomitrium patens HOM05D003678 ORTHO05D004340 7.0e-70 268.5 363 41.6
ECA246G1371 Erigeron canadensis HOM05D000763 ORTHO05D004340 4.3e-67 259.2 294 50.0
CDE05G1087 Ceratophyllum demersum HOM05D003678 ORTHO05D004340 5.6e-67 258.8 323 47.1
TAR383G1077 Trochodendron aralioides HOM05D003678 ORTHO05D004340 7.8e-61 238.4 329 43.8
CDE05G3053 Ceratophyllum demersum HOM05D003678 ORTHO05D004340 8.1e-58 228.4 266 50.4
CBR_g30359 Chara braunii HOM05D003678 ORTHO05D004340 1.4e-57 227.6 413 35.8
AagrBONN_evm.TU.Sc2ySwM_228.5550 Anthoceros agrestis HOM05D003678 ORTHO05D004340 2.4e-54 216.9 334 40.4
BcaC07g37410 Brassica carinata HOM05D003678 ORTHO05D004340 2.1e-53 213.8 250 48.0
Pp3c14_26000 Physcomitrium patens HOM05D003678 ORTHO05D004340 9.0e-41 171.8 194 44.8
CAN.G4.3 Capsicum annuum HOM05D003678 ORTHO05D004340 1.8e-36 157.5 105 68.6
BolC1t05292H Brassica oleracea HOM05D003678 ORTHO05D004340 2.8e-34 150.2 207 45.9
BolC8t47735H Brassica oleracea HOM05D003678 ORTHO05D004340 1.4e-30 137.9 215 41.4
C03p31060 Brassica napus HOM05D003678 ORTHO05D004340 3.5e-29 133.3 215 40.5
BcaB03g16788 Brassica carinata HOM05D003678 ORTHO05D004340 3.4e-24 116.7 132 46.2
ECA246G4346 Erigeron canadensis HOM05D000087 ORTHO05D009473 1.4e-22 111.3 97 60.8
Cfa025296 Carpinus fangiana HOM05D003678 ORTHO05D004340 9.3e-22 108.6 297 28.6
BcaC05g27745 Brassica carinata HOM05D003678 ORTHO05D004340 3.9e-20 103.2 108 52.8
C05p37300 Brassica napus HOM05D003678 ORTHO05D004340 3.9e-20 103.2 108 52.8
C08p08900 Brassica napus HOM05D003678 ORTHO05D004340 8.7e-20 102.1 108 51.9
BcaC06g31298 Brassica carinata HOM05D003678 ORTHO05D004340 3.3e-19 100.1 53 75.5
ECA246G0440 Erigeron canadensis HOM05D003678 ORTHO05D004340 2.1e-18 97.4 60 66.7
Actinidia14145 Actinidia chinensis HOM05D003678 ORTHO05D004340 9.0e-17 92.0 74 60.8
PRCOL_00002050 Prasinoderma coloniale HOM05D003678 ORTHO05D004340 9.0e-17 92.0 343 26.2
Cre17.g716400 Chlamydomonas reinhardtii HOM05D003678 ORTHO05D004340 1.7e-15 87.8 169 34.3
BcaC09g48197 Brassica carinata HOM05D003678 ORTHO05D011193 9.3e-14 82.0 114 41.2
Medtr5g061270 Medicago truncatula HOM05D003678 ORTHO05D004340 4.6e-13 79.7 144 39.6
BcaC01g05020 Brassica carinata HOM05D003678 ORTHO05D004340 7.4e-11 72.4 119 43.7
BcaC05g28588 Brassica carinata HOM05D015584 ORTHO05D016118 2.8e-10 70.5 48 62.5
ECA233G0490 Erigeron canadensis HOM05D003678 ORTHO05D004340 3.4e-08 63.5 83 42.2
Pp3c17_19500 Physcomitrium patens HOM05D003678 ORTHO05D004340 4.5e-08 63.2 51 49.0
A04p16990 Brassica napus HOM05D003678 ORTHO05D004340 7.7e-08 62.4 92 44.6
BcaC08g45872 Brassica carinata HOM05D005572 ORTHO05D032868 1.3e-07 61.6 31 83.9
BcaC09g48198 Brassica carinata HOM05D003678 ORTHO05D004340 2.9e-07 60.5 69 50.7
C05p46930 Brassica napus HOM05D003678 ORTHO05D016118 1.1e-06 58.5 36 66.7
BolC5t33423H Brassica oleracea HOM05D003678 ORTHO05D016118 1.1e-06 58.5 36 66.7
Cfa024431 Carpinus fangiana HOM05D003678 ORTHO05D124744 1.4e-06 58.2 99 35.4
SHI21127 Sapria himalayana HOM05D003678 ORTHO05D004340 1.9e-06 57.8 57 49.1


User provided reference genes

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