Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400019106 Solanum tuberosum HOM05D004763 ORTHO05D007492 8.5e-23 109.4 52 100.0
Atru.chr3.2503 Acer truncatum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Actinidia39377 Actinidia chinensis HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Aa31LG8G7590 Aethionema arabicum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Ah.04g161760 Amaranthus hybridus HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
AL3G34700 Arabidopsis lyrata HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
AT3G20780 Arabidopsis thaliana HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
arahy.Tifrunner.gnm1.ann1.GN3GFY Arachis hypogaea HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
arahy.Tifrunner.gnm1.ann1.P0K6XU Arachis hypogaea HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
arahy.Tifrunner.gnm1.ann1.VYK1P0 Arachis hypogaea HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
arahy.Tifrunner.gnm1.ann1.X75IXN Arachis hypogaea HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
EL10Ac4g10318 Beta vulgaris HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
BcaB06g26148 Brassica carinata HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
BcaC05g28282 Brassica carinata HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
A05p28000 Brassica napus HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
C05p43300 Brassica napus HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
BolC5t33062H Brassica oleracea HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
CSS0044360 Camellia sinensis var. sinensis HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
CANSAT54G1729 Cannabis sativa HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Carub.0003s2074 Capsella rubella HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
CAN.G646.1 Capsicum annuum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
CARHR096610 Cardamine hirsuta HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Cpa.g.sc84.111 Carica papaya HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
CiPaw.14G125100 Carya illinoinensis HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Ca_01270_v3 Cicer arietinum L. HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
ClCG02G023620 Citrullus lanatus HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Ciclev10014511m.g Citrus clementina HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Cc01_g04070 Coffea canephora HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
COL.COLO4_09893 Corchorus olitorius HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Haze_23044 Corylus avellana HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
MELO3C014639.2 Cucumis melo HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
CsaV3_4G023800 Cucumis sativus L. HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
DCAR_024396 Daucus carota HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Thhalv10020214m.g Eutrema salsugineum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
FvH4_3g43550 Fragaria vesca HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
FAN11G0713 Fragaria x ananassa HOM05D004763 ORTHO05D007492 4.4e-11 70.5 38 86.8
FAN11G2145 Fragaria x ananassa HOM05D004763 ORTHO05D007492 4.4e-11 70.5 38 86.8
FAN16G3272 Fragaria x ananassa HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Glyma.13G342900 Glycine max HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Gohir.A13G215400 Gossypium hirsutum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Gohir.D13G219100 Gossypium hirsutum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Gorai.013G250000 Gossypium raimondii HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
HanXRQChr14g0451781 Helianthus annuus HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Hma1.2p1_1169F.1_g263300 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Hma1.2p1_1169F.1_g263310 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Lalb_Chr14g0372291 Lupinus albus HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
MBI01_g15753_MAGBIO Magnolia biondii HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
MD03G1021100 Malus domestica HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Manes.14G014500 Manihot esculenta HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Medtr2g098510 Medicago truncatula HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Nn7g36058 Nelumbo nucifera HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Nitab4.5_0003069g0050 Nicotiana tabacum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Nitab4.5_0006575g0020 Nicotiana tabacum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
PSO339G3791 Papaver somniferum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Phvul.005G150500 Phaseolus vulgaris HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Psat5g288480 Pisum sativum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Potri.003G211000 Populus trichocarpa HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Potri.T085401 Populus trichocarpa HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Prupe.6G018600 Prunus persica HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
PGR102G0325 Punica granatum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
QL01p006243 Quercus lobata HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
RcHm_v2.0_Chr5g0078101 Rosa chinensis HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Sabra03G0153800 Salix brachista HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Sabra03G0156000 Salix brachista HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Sp3g18800 Schrenkiella parvula HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Hund22081 Selenicereus undatus HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Solyc01g014490.4 Solanum lycopersicum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Sopen01g009200 Solanum pennellii HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
PGSC0003DMG401029907 Solanum tuberosum HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
THA.LOC104816912 Tarenaya hassleriana HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Thecc.09G223100 Theobroma cacao HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
TWI34G0672 Tripterygium wilfordii HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
TAR623G1126 Trochodendron aralioides HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
GSVIVG01025336001 Vitis vinifera HOM05D004763 ORTHO05D007492 4.4e-11 70.5 37 86.5
Aqoxy1G00185 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 9.8e-11 69.3 37 83.8
Aqoxy381s001 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 9.8e-11 69.3 37 83.8
Migut.D00558 Erythranthe guttata HOM05D004763 ORTHO05D007492 9.8e-11 69.3 37 83.8
Eucgr.B03662 Eucalyptus grandis HOM05D004763 ORTHO05D007492 9.8e-11 69.3 37 83.8
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 9.8e-11 69.3 37 83.8
ATR0605G091 Amborella trichopoda HOM05D004763 ORTHO05D007492 1.3e-10 68.9 37 83.8
Dinv36304 Davidia involucrata HOM05D004763 ORTHO05D007492 1.3e-10 68.9 37 83.8
FAN21G2003 Fragaria x ananassa HOM05D004763 ORTHO05D007492 1.7e-10 68.6 38 81.6
Lj3g0020649 Lotus japonicus HOM05D004763 ORTHO05D007492 1.7e-10 68.6 37 83.8
Lj4g0010878 Lotus japonicus HOM05D004763 ORTHO05D007492 1.7e-10 68.6 37 83.8
Peaxi162Scf00773g00119 Petunia axillaris HOM05D004763 ORTHO05D007492 1.7e-10 68.6 37 83.8
Sed0013957 Sechium edule HOM05D004763 ORTHO05D007492 1.7e-10 68.6 37 83.8
TPR.G29742 Trifolium pratense HOM05D004763 ORTHO05D007492 1.7e-10 68.6 34 91.2
Mapoly0042s0060 Marchantia polymorpha HOM05D004763 ORTHO05D007492 2.2e-10 68.2 37 83.8
SMO116G0144 Selaginella moellendorffii HOM05D004763 ORTHO05D007492 2.2e-10 68.2 37 83.8
SEGI_32015 Sequoiadendron giganteum HOM05D004763 ORTHO05D007492 2.2e-10 68.2 37 83.8
Sc09g0000480 Simmondsia chinensis HOM05D004763 ORTHO05D007492 2.2e-10 68.2 37 83.8
HPP92_020536 Vanilla planifolia HOM05D004763 ORTHO05D007492 2.2e-10 68.2 37 83.8
Oeu036968.1 Olea europaea HOM05D004763 ORTHO05D007492 2.8e-10 67.8 37 83.8
AagrBONN_evm.TU.Sc2ySwM_344.3405 Anthoceros agrestis HOM05D004763 ORTHO05D007492 3.7e-10 67.4 37 83.8
CDE04G0998 Ceratophyllum demersum HOM05D004763 ORTHO05D007492 3.7e-10 67.4 37 83.8
AUR62019250 Chenopodium quinoa HOM05D004763 ORTHO05D007492 3.7e-10 67.4 37 83.8
ECA238G4453 Erigeron canadensis HOM05D004763 ORTHO05D007492 3.7e-10 67.4 37 83.8
SGA_v2.0_scaffold1G00797 Striga asiatica HOM05D004763 ORTHO05D007492 3.7e-10 67.4 37 83.8
Os09g0279600 Oryza sativa ssp. japonica HOM05D004763 ORTHO05D007492 4.8e-10 67.0 37 81.1
CBR_g31022 Chara braunii HOM05D004763 ORTHO05D007492 6.3e-10 66.6 37 81.1
Pp3c22_12720 Physcomitrium patens HOM05D004763 ORTHO05D007492 2.4e-09 64.7 37 81.1
Cre01.g019750 Chlamydomonas reinhardtii HOM05D004763 ORTHO05D007492 3.1e-09 64.3 37 78.4
BraA05t21683Z Brassica rapa HOM05D004763 ORTHO05D007492 7.0e-09 63.2 45 71.1
MCO09G243 Micromonas commoda HOM05D004763 ORTHO05D007492 2.0e-08 61.6 37 73.0
Rhsim01G0189300 Rhododendron simsii HOM05D004763 ORTHO05D007492 4.5e-08 60.5 49 63.3
Duzib150G1218 Durio zibethinus HOM05D004763 ORTHO05D007492 7.7e-08 59.7 54 59.3
PRCOL_00005940 Prasinoderma coloniale HOM05D004763 ORTHO05D007492 5.5e-06 53.5 37 62.2


User provided reference genes

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