Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018825 Solanum tuberosum HOM05D006159 ORTHO05D007624 1.6e-70 269.2 132 100.0
Sopen09g019910 Solanum pennellii HOM05D006159 ORTHO05D007624 1.2e-68 263.1 131 97.7
Sopen02g007480 Solanum pennellii HOM05D006159 ORTHO05D007624 5.6e-63 244.2 127 94.5
Peaxi162Scf00095g10135 Petunia axillaris HOM05D006159 ORTHO05D007624 1.6e-62 242.7 131 87.8
Nitab4.5_0001438g0090 Nicotiana tabacum HOM05D006159 ORTHO05D007624 1.1e-61 240.0 131 87.0
Nitab4.5_0005248g0030 Nicotiana tabacum HOM05D006159 ORTHO05D007624 3.1e-61 238.4 131 86.3
Migut.N00748 Erythranthe guttata HOM05D006159 ORTHO05D007624 2.6e-52 208.8 127 75.6
SGA_v2.0_scaffold5G02753 Striga asiatica HOM05D006159 ORTHO05D007624 2.2e-51 205.7 130 72.3
TAR633G1181 Trochodendron aralioides HOM05D006159 ORTHO05D007624 2.2e-51 205.7 131 70.2
Lj2A1097G33 Lonicera japonica HOM05D006159 ORTHO05D007624 1.4e-50 203.0 130 73.1
CSS0020536 Camellia sinensis var. sinensis HOM05D006159 ORTHO05D007624 3.2e-50 201.8 129 71.3
CSS0033482 Camellia sinensis var. sinensis HOM05D006159 ORTHO05D007624 3.2e-50 201.8 129 71.3
MSTRG.17900 Avicennia marina HOM05D006159 ORTHO05D007624 1.6e-49 199.5 130 70.8
Gorai.003G151400 Gossypium raimondii HOM05D006159 ORTHO05D007624 3.5e-49 198.4 130 71.5
Thecc.09G360700 Theobroma cacao HOM05D006159 ORTHO05D007624 4.6e-49 198.0 124 74.2
Haze_24438 Corylus avellana HOM05D006159 ORTHO05D007624 6.0e-49 197.6 131 67.9
Gohir.A03G024400 Gossypium hirsutum HOM05D006159 ORTHO05D007624 6.0e-49 197.6 130 70.8
Dinv28707 Davidia involucrata HOM05D006159 ORTHO05D007624 1.0e-48 196.8 131 70.2
Cc01_g15060 Coffea canephora HOM05D006159 ORTHO05D007624 3.9e-48 194.9 130 70.8
Nn2g11083 Nelumbo nucifera HOM05D006159 ORTHO05D007624 5.1e-48 194.5 124 71.8
QL01p025515 Quercus lobata HOM05D006159 ORTHO05D007624 5.1e-48 194.5 129 68.2
COL.COLO4_11182 Corchorus olitorius HOM05D006159 ORTHO05D007624 1.5e-47 193.0 133 67.7
Actinidia23185 Actinidia chinensis HOM05D006159 ORTHO05D007624 1.9e-47 192.6 127 71.7
Rhsim13G0062400 Rhododendron simsii HOM05D006159 ORTHO05D007624 2.5e-47 192.2 130 69.2
CiPaw.14G053000 Carya illinoinensis HOM05D006159 ORTHO05D007624 3.3e-47 191.8 129 70.5
Lalb_Chr17g0345491 Lupinus albus HOM05D006159 ORTHO05D007624 5.6e-47 191.0 129 68.2
Rhsim01G0241600 Rhododendron simsii HOM05D006159 ORTHO05D007624 7.4e-47 190.7 122 70.5
Hma1.2p1_1586F.1_g292125 Hydrangea macrophylla HOM05D006159 ORTHO05D007624 2.1e-46 189.1 130 69.2
GSVIVG01024604001 Vitis vinifera HOM05D006159 ORTHO05D007624 2.8e-46 188.7 131 66.4
Psat2g052680 Pisum sativum HOM05D006159 ORTHO05D007624 3.7e-46 188.3 129 65.9
Prupe.6G045100 Prunus persica HOM05D006159 ORTHO05D007624 3.7e-46 188.3 129 65.9
SalBow2G3538 Salvia bowleyana HOM05D006159 ORTHO05D007624 3.7e-46 188.3 130 66.9
Ca_05688_v3 Cicer arietinum L. HOM05D006159 ORTHO05D007624 6.2e-46 187.6 129 67.4
vmacro02902 Vaccinium macrocarpon HOM05D006159 ORTHO05D007624 1.4e-45 186.4 127 68.5
Glyma.02G233600 Glycine max HOM05D006159 ORTHO05D007624 1.8e-45 186.0 131 63.4
FvH4_3g40070 Fragaria vesca HOM05D006159 ORTHO05D007624 2.4e-45 185.7 129 62.0
FAN21G3656 Fragaria x ananassa HOM05D006159 ORTHO05D007624 2.4e-45 185.7 129 62.0
Aqoxy4G02147 Aquilegia oxysepala HOM05D006159 ORTHO05D007624 3.1e-45 185.3 131 66.4
RcHm_v2.0_Chr5g0072261 Rosa chinensis HOM05D006159 ORTHO05D007624 3.1e-45 185.3 129 62.0
FAN25G2364 Fragaria x ananassa HOM05D006159 ORTHO05D007624 4.0e-45 184.9 129 62.0
FAN11G2758 Fragaria x ananassa HOM05D006159 ORTHO05D007624 5.3e-45 184.5 129 61.2
FAN16G1196 Fragaria x ananassa HOM05D006159 ORTHO05D007624 5.3e-45 184.5 129 61.2
Ah.15g096550 Amaranthus hybridus HOM05D006159 ORTHO05D007624 6.9e-45 184.1 130 63.1
Duzib168G0394 Durio zibethinus HOM05D006159 ORTHO05D007624 9.0e-45 183.7 116 75.9
Phvul.008G250100 Phaseolus vulgaris HOM05D006159 ORTHO05D007624 1.2e-44 183.3 131 64.1
Medtr5g074640 Medicago truncatula HOM05D006159 ORTHO05D007624 1.5e-44 183.0 129 65.1
vmacro14626 Vaccinium macrocarpon HOM05D006159 ORTHO05D007624 2.0e-44 182.6 127 66.1
TPR.G27348 Trifolium pratense HOM05D006159 ORTHO05D007624 7.6e-44 180.6 128 64.1
CANSAT54G0267 Cannabis sativa HOM05D006159 ORTHO05D007624 1.0e-43 180.3 119 68.1
VMungo0647G0641 Vigna mungo HOM05D006159 ORTHO05D007624 2.2e-43 179.1 131 62.6
arahy.Tifrunner.gnm1.ann1.N5JXUH Arachis hypogaea HOM05D006159 ORTHO05D007624 2.9e-43 178.7 130 63.8
AUR62009718 Chenopodium quinoa HOM05D006159 ORTHO05D007624 2.9e-43 178.7 131 61.8
arahy.Tifrunner.gnm1.ann1.3A3S4A Arachis hypogaea HOM05D006159 ORTHO05D007624 3.8e-43 178.3 127 65.4
arahy.Tifrunner.gnm1.ann1.C311ZQ Arachis hypogaea HOM05D006159 ORTHO05D007624 3.8e-43 178.3 127 65.4
MD11G1060800 Malus domestica HOM05D006159 ORTHO05D007624 3.8e-43 178.3 128 66.4
PSO017G5079 Papaver somniferum HOM05D006159 ORTHO05D007624 4.9e-43 177.9 127 63.0
Sabra13G0124000 Salix brachista HOM05D006159 ORTHO05D007624 8.4e-43 177.2 130 63.8
Lsat_1_v5_gn_9_14440 Lactuca sativa HOM05D006159 ORTHO05D007624 1.9e-42 176.0 130 64.6
PSO170G6759 Papaver somniferum HOM05D006159 ORTHO05D007624 2.5e-42 175.6 127 61.4
AUR62036228 Chenopodium quinoa HOM05D006159 ORTHO05D007624 4.2e-42 174.9 130 63.1
EL10Ac7g15868 Beta vulgaris HOM05D006159 ORTHO05D007624 5.5e-42 174.5 130 62.3
Ca_27536_v3 Cicer arietinum L. HOM05D006159 ORTHO05D007624 5.5e-42 174.5 130 63.1
LjContig00141g0000315 Lotus japonicus HOM05D006159 ORTHO05D007624 7.1e-42 174.1 131 60.3
CiPaw.13G066700 Carya illinoinensis HOM05D006159 ORTHO05D007624 9.3e-42 173.7 119 68.1
Psat0s1662g0080 Pisum sativum HOM05D006159 ORTHO05D007624 9.3e-42 173.7 130 60.8
Atru.chr1.2561 Acer truncatum HOM05D006159 ORTHO05D007624 1.2e-41 173.3 130 65.4
TPR.G27345 Trifolium pratense HOM05D006159 ORTHO05D007624 2.1e-41 172.6 124 64.5
Lalb_Chr10g0103671 Lupinus albus HOM05D006159 ORTHO05D007624 3.5e-41 171.8 131 59.5
Eucgr.J03050 Eucalyptus grandis HOM05D006159 ORTHO05D007624 4.6e-41 171.4 130 60.0
Cpa.g.c29031.3 Carica papaya HOM05D006159 ORTHO05D007624 7.9e-41 170.6 117 69.2
Ciclev10003830m.g Citrus clementina HOM05D006159 ORTHO05D007624 7.9e-41 170.6 124 65.3
Medtr5g074620 Medicago truncatula HOM05D006159 ORTHO05D007624 1.3e-40 169.9 130 60.0
Glyma.02G233500 Glycine max HOM05D006159 ORTHO05D007624 3.0e-40 168.7 127 60.6
ECA247G0586 Erigeron canadensis HOM05D006159 ORTHO05D007624 8.7e-40 167.2 129 61.2
Potri.013G154200 Populus trichocarpa HOM05D006159 ORTHO05D007624 1.1e-39 166.8 130 60.8
MELO3C020498.2 Cucumis melo HOM05D006159 ORTHO05D007624 1.5e-39 166.4 124 60.5
Glyma.U039500 Glycine max HOM05D006159 ORTHO05D007624 2.5e-39 165.6 127 59.8
TWI31G0474 Tripterygium wilfordii HOM05D006159 ORTHO05D007624 2.5e-39 165.6 130 60.0
VMungo0647G1827 Vigna mungo HOM05D006159 ORTHO05D007624 2.5e-39 165.6 127 59.8
Os03g0338600 Oryza sativa ssp. japonica HOM05D006159 ORTHO05D007624 4.3e-39 164.9 128 60.2
arahy.Tifrunner.gnm1.ann1.9T2ABX Arachis hypogaea HOM05D006159 ORTHO05D007624 5.7e-39 164.5 117 66.7
ClCG03G000200 Citrullus lanatus HOM05D006159 ORTHO05D007624 5.7e-39 164.5 126 59.5
Phvul.008G250200 Phaseolus vulgaris HOM05D006159 ORTHO05D007624 9.7e-39 163.7 127 58.3
ECA247G2911 Erigeron canadensis HOM05D006159 ORTHO05D007624 1.3e-38 163.3 131 60.3
CsaV3_1G036700 Cucumis sativus L. HOM05D006159 ORTHO05D007624 6.3e-38 161.0 124 59.7
HanXRQChr08g0228561 Helianthus annuus HOM05D006159 ORTHO05D007624 8.2e-38 160.6 126 62.7
Sed0023817 Sechium edule HOM05D006159 ORTHO05D007624 1.4e-37 159.8 126 58.7
THA.LOC104800779 Tarenaya hassleriana HOM05D006159 ORTHO05D007624 2.4e-37 159.1 126 58.7
Thhalv10016529m.g Eutrema salsugineum HOM05D006159 ORTHO05D007624 5.3e-37 157.9 126 57.1
Manes.18G138800 Manihot esculenta HOM05D006159 ORTHO05D007624 5.3e-37 157.9 119 64.7
Aa31LG5G6390 Aethionema arabicum HOM05D006159 ORTHO05D007624 1.5e-36 156.4 127 58.3
Sp4g12880 Schrenkiella parvula HOM05D006159 ORTHO05D007624 5.9e-36 154.5 126 54.8
Actinidia34484 Actinidia chinensis HOM05D006159 ORTHO05D007624 1.7e-35 152.9 92 79.3
LjContig00141g0002443 Lotus japonicus HOM05D006159 ORTHO05D007624 1.7e-35 152.9 115 62.6
PGR031G1374 Punica granatum HOM05D006159 ORTHO05D007624 1.7e-35 152.9 130 56.9
C03p19940 Brassica napus HOM05D006159 ORTHO05D007624 2.2e-35 152.5 127 55.9
BolC3t14372H Brassica oleracea HOM05D006159 ORTHO05D007624 2.2e-35 152.5 127 55.9
Zm00001eb016190 Zea mays HOM05D006159 ORTHO05D007624 5.0e-35 151.4 128 53.9
AL4G25180 Arabidopsis lyrata HOM05D006159 ORTHO05D007624 6.5e-35 151.0 125 57.6
CARHR123640 Cardamine hirsuta HOM05D006159 ORTHO05D007624 1.9e-34 149.4 125 56.8
HPP92_011991 Vanilla planifolia HOM05D006159 ORTHO05D007624 7.2e-34 147.5 126 52.4
AT2G30320 Arabidopsis thaliana HOM05D006159 ORTHO05D007624 9.3e-34 147.1 125 56.0
A03p16930 Brassica napus HOM05D006159 ORTHO05D007624 1.6e-33 146.4 127 55.1
Carub.0004s1147 Capsella rubella HOM05D006159 ORTHO05D007624 1.8e-32 142.9 125 53.6
BcaC01g05985 Brassica carinata HOM05D006159 ORTHO05D007624 1.8e-29 132.9 116 53.4
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 1.5e-28 129.8 92 69.6
Gohir.D03G144100 Gossypium hirsutum HOM05D006159 ORTHO05D007624 9.4e-26 120.6 83 69.9
ATR1127G103 Amborella trichopoda HOM05D006159 ORTHO05D007624 1.2e-25 120.2 100 57.0
SEGI_02969 Sequoiadendron giganteum HOM05D006159 ORTHO05D007624 1.2e-25 120.2 138 48.6
CARHR034090 Cardamine hirsuta HOM05D006159 ORTHO05D007624 1.7e-19 99.8 94 52.1
Pp3c2_21310 Physcomitrium patens HOM05D006159 ORTHO05D007624 1.6e-17 93.2 141 35.5
Mapoly0146s0022 Marchantia polymorpha HOM05D006159 ORTHO05D007624 1.5e-15 86.7 140 35.7
SMO134G0068 Selaginella moellendorffii HOM05D006159 ORTHO05D007624 1.5e-15 86.7 133 35.3
AagrBONN_evm.TU.Sc2ySwM_117.4076 Anthoceros agrestis HOM05D006159 ORTHO05D007624 2.0e-15 86.3 134 34.3
SMO367G0138 Selaginella moellendorffii HOM05D006159 ORTHO05D007624 5.7e-15 84.7 124 33.9
CBR_g51420 Chara braunii HOM05D006159 ORTHO05D007624 1.8e-08 63.2 156 28.8


User provided reference genes

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