Gene: HPP92_011991

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_011991
  • Transcript Identifier Vpl05Ag11991.1
  • Gene Type Coding gene
  • Location CM028154.1 : 42314088-42325561 : positive

Gene Family Information

  • ID HOM05D006159
  • #Genes/#Species 129/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl05Ag11991.1
  • pid KAG0481133.1

Descriptions

  • Description tRNA pseudouridine synthase ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
InterProRNA modification
GO:0031119
ISO
PLAZA Homology (enrichment)tRNA pseudouridine synthesis HOM05D006159

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
InterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain
IPR020095 Pseudouridine synthase I, TruA, C-terminal
IPR020103 Pseudouridine synthase, catalytic domain superfamily
IPR001406 Pseudouridine synthase I, TruA
Mapman id Description
16.5.3.1 RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA)