Gene: CSS0020536
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0020536
- Transcript Identifier CSS0020536.1
- Gene Type Coding gene
- Location Contig592 : 150505-162968 : negative
Gene Family Information
- ID HOM05D006159
- #Genes/#Species 129/93
- Phylogenetic origin
- ID ORTHO05D007624
- #Genes/#Species 128/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0020536.1
Descriptions
- Description PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0001522 | IEA | InterPro | pseudouridine synthesis | |
GO:0009451 | IEA | InterPro | RNA modification | |
GO:0031119 | IEA | InterPro | tRNA pseudouridine synthesis |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003723 | IEA | InterPro | RNA binding | |
GO:0009982 | IEA | InterPro | pseudouridine synthase activity |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR020103 | Pseudouridine synthase, catalytic domain superfamily |
IPR020094 | Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal |
IPR020097 | Pseudouridine synthase I, TruA, alpha/beta domain |
IPR020095 | Pseudouridine synthase I, TruA, C-terminal |
IPR041708 | Pseudouridine synthase PUS1/ PUS2-like |
IPR001406 | Pseudouridine synthase I, TruA |
Mapman id | Description |
---|---|
16.5.3.1 | RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA) |