Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000162 Solanum tuberosum HOM05D001670 ORTHO05D017370 1.8e-221 772.3 392 100.0
PGSC0003DMG402000201 Solanum tuberosum HOM05D001670 ORTHO05D017370 4.6e-129 465.3 384 67.4
PGSC0003DMG400000050 Solanum tuberosum HOM05D001670 ORTHO05D017370 2.8e-94 349.7 214 85.0
CAN.G78.28 Capsicum annuum HOM05D001670 ORTHO05D017370 3.3e-79 299.7 214 76.2
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 1.9e-50 204.1 155 65.2
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 1.9e-50 204.1 161 63.4
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 7.3e-50 202.2 155 63.9
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 1.2e-49 201.4 267 47.6
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.6e-49 201.1 222 50.0
TAR374G0935 Trochodendron aralioides HOM05D001670 ORTHO05D002980 8.0e-49 198.7 221 49.3
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 3.1e-48 196.8 173 59.0
CSS0023490 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 4.0e-48 196.4 161 62.1
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 4.0e-48 196.4 161 62.1
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 4.0e-48 196.4 221 48.9
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 4.0e-48 196.4 173 59.0
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 5.2e-48 196.1 205 50.7
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 8.9e-48 195.3 221 48.4
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 1.2e-47 194.9 164 62.2
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 1.5e-47 194.5 219 47.9
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 1.5e-47 194.5 221 49.3
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 1.5e-47 194.5 165 61.2
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 1.5e-47 194.5 193 51.8
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 2.0e-47 194.1 161 60.2
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 2.0e-47 194.1 230 46.5
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 3.4e-47 193.4 156 62.2
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 5.8e-47 192.6 205 51.2
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 9.8e-47 191.8 155 61.3
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 1.3e-46 191.4 205 50.7
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 2.2e-46 190.7 155 61.3
Cpa.g.sc914.1 Carica papaya HOM05D001670 ORTHO05D002980 2.9e-46 190.3 216 50.9
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 2.9e-46 190.3 205 50.7
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 3.7e-46 189.9 221 48.0
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 4.9e-46 189.5 199 51.8
GSVIVG01018721001 Vitis vinifera HOM05D001670 ORTHO05D002980 4.9e-46 189.5 167 58.1
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 6.4e-46 189.1 220 47.3
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 6.4e-46 189.1 155 59.4
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 8.3e-46 188.7 167 57.5
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 8.3e-46 188.7 261 43.3
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 1.1e-45 188.3 211 48.8
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 1.4e-45 188.0 155 59.4
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 1.4e-45 188.0 168 56.5
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 1.9e-45 187.6 161 59.0
Lj7C538G19 Lonicera japonica HOM05D001670 ORTHO05D002980 1.9e-45 187.6 155 60.6
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 1.9e-45 187.6 180 54.4
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 1.9e-45 187.6 155 60.0
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 2.4e-45 187.2 213 50.2
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 2.4e-45 187.2 193 50.8
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 2.4e-45 187.2 176 51.7
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 2.4e-45 187.2 155 58.7
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 3.2e-45 186.8 155 58.7
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 4.1e-45 186.4 162 57.4
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 4.1e-45 186.4 217 46.1
Gohir.D11G082400 Gossypium hirsutum HOM05D001670 ORTHO05D002980 5.4e-45 186.0 193 50.8
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 7.0e-45 185.7 193 50.8
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 7.0e-45 185.7 199 49.7
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 9.2e-45 185.3 183 53.6
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 1.2e-44 184.9 235 44.7
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 1.6e-44 184.5 168 56.0
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 1.6e-44 184.5 177 54.8
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 2.0e-44 184.1 164 56.7
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 2.7e-44 183.7 161 55.9
CDE09G0971 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 2.7e-44 183.7 206 47.6
Oeu064574.1 Olea europaea HOM05D001670 ORTHO05D002980 3.5e-44 183.3 155 59.4
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 4.6e-44 183.0 200 49.5
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 6.0e-44 182.6 159 54.7
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 6.0e-44 182.6 177 53.7
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 7.8e-44 182.2 155 58.7
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 7.8e-44 182.2 177 53.7
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 1.0e-43 181.8 177 52.0
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 1.0e-43 181.8 163 55.2
CDE11G0646 Ceratophyllum demersum HOM05D001670 ORTHO05D017370 1.7e-43 181.0 179 51.4
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.7e-43 181.0 162 54.3
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.7e-43 181.0 162 54.3
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 2.3e-43 180.6 162 54.3
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.3e-43 180.6 162 54.3
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.3e-43 180.6 162 54.3
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.3e-43 180.6 162 54.3
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.3e-43 180.6 162 54.3
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 2.3e-43 180.6 162 58.0
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 3.0e-43 180.3 178 52.8
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 5.0e-43 179.5 183 49.7
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 6.6e-43 179.1 199 48.7
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 1.1e-42 178.3 174 53.4
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.1e-42 178.3 160 55.0
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 1.5e-42 177.9 178 53.4
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 1.5e-42 177.9 155 56.1
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.9e-42 177.6 207 45.9
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 2.5e-42 177.2 191 51.3
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 2.5e-42 177.2 167 56.9
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 2.5e-42 177.2 192 53.1
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 3.3e-42 176.8 162 57.4
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 3.3e-42 176.8 155 57.4
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 3.3e-42 176.8 166 54.8
BcaNung05012 Brassica carinata HOM05D001670 ORTHO05D002980 5.6e-42 176.0 161 54.0
A09p69240 Brassica napus HOM05D001670 ORTHO05D002980 5.6e-42 176.0 161 54.0
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 5.6e-42 176.0 161 54.0
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 5.6e-42 176.0 161 54.0
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 7.3e-42 175.6 220 46.4
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 9.5e-42 175.3 155 58.1
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 9.5e-42 175.3 159 55.3
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 9.5e-42 175.3 160 54.4
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 1.2e-41 174.9 223 45.7
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 1.2e-41 174.9 244 43.9
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 1.6e-41 174.5 161 53.4
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 2.1e-41 174.1 153 56.2
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 2.1e-41 174.1 155 54.2
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 2.1e-41 174.1 155 54.2
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 2.1e-41 174.1 153 56.2
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 2.1e-41 174.1 155 54.2
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 2.1e-41 174.1 153 56.2
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 2.1e-41 174.1 155 54.2
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 2.1e-41 174.1 194 49.5
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 3.6e-41 173.3 159 54.7
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 3.6e-41 173.3 155 54.2
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 3.6e-41 173.3 155 55.5
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 3.6e-41 173.3 167 53.3
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 6.2e-41 172.6 209 45.9
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 8.1e-41 172.2 155 54.2
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 1.1e-40 171.8 153 54.9
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 1.1e-40 171.8 153 54.9
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 1.4e-40 171.4 196 46.9
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 1.8e-40 171.0 155 52.3
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 3.1e-40 170.2 155 53.5
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 3.1e-40 170.2 155 53.5
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 5.2e-40 169.5 164 54.9
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 5.2e-40 169.5 155 54.2
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 8.9e-40 168.7 155 53.5
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 1.2e-39 168.3 190 48.4
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 1.5e-39 167.9 155 52.9
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 1.5e-39 167.9 154 53.9
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 2.0e-39 167.5 171 49.1
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 2.6e-39 167.2 152 53.3
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 4.4e-39 166.4 243 41.2
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 3.7e-38 163.3 171 50.3
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 1.4e-37 161.4 168 51.2
Lsat_1_v5_gn_5_55541 Lactuca sativa HOM05D000041 ORTHO05D000452 5.4e-37 159.5 159 51.6
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 1.6e-36 157.9 209 42.6
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 1.7e-35 154.5 153 50.3
Actinidia24999 Actinidia chinensis HOM05D001670 ORTHO05D002980 3.0e-35 153.7 166 49.4
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 8.6e-35 152.1 155 49.7
Actinidia12669 Actinidia chinensis HOM05D001670 ORTHO05D002980 1.5e-34 151.4 177 50.3
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 1.9e-34 151.0 204 39.7
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 6.2e-33 146.0 150 49.3
Thecc.03G154200 Theobroma cacao HOM05D001670 ORTHO05D002980 6.2e-33 146.0 185 43.2
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 1.1e-32 145.2 154 48.1
C08p54060 Brassica napus HOM05D001670 ORTHO05D002980 1.3e-30 138.3 133 52.6
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 2.2e-30 137.5 214 39.7
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 5.4e-29 132.9 186 43.0
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 7.1e-29 132.5 161 43.5
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 6.0e-28 129.4 217 38.2
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 1.7e-27 127.9 166 41.6
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 1.9e-26 124.4 151 42.4
Cre14.g632950 Chlamydomonas reinhardtii HOM05D001670 ORTHO05D002980 3.6e-25 120.2 180 37.8
MBI18_g42384_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D017370 6.9e-24 115.9 111 54.1
SHI13578 Sapria himalayana HOM05D001670 ORTHO05D002980 2.6e-23 114.0 86 62.8
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 4.9e-22 109.8 152 39.5
Lsat_1_v5_gn_4_44300 Lactuca sativa HOM05D001670 ORTHO05D017370 4.2e-21 106.7 230 31.7
Aqoxy4G01930 Aquilegia oxysepala HOM05D001670 ORTHO05D017370 1.6e-20 104.8 131 44.3
Lsat_1_v5_gn_4_44320 Lactuca sativa HOM05D001670 ORTHO05D002980 1.5e-18 98.2 104 45.2
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 2.8e-17 94.0 76 59.2
Cfa026075 Carpinus fangiana HOM05D001670 ORTHO05D002980 3.3e-10 70.5 132 30.3
Haze_02723 Corylus avellana HOM05D001670 ORTHO05D002980 2.2e-06 57.8 56 55.4
PGSC0003DMG400000049 Solanum tuberosum HOM05D001670 ORTHO05D002980 2.9e-06 57.4 53 50.9
PGSC0003DMG401000201 Solanum tuberosum HOM05D001670 ORTHO05D002980 2.9e-06 57.4 53 50.9
Pp3c21_18750 Physcomitrium patens HOM05D001670 ORTHO05D017370 4.9e-06 56.6 88 36.4


User provided reference genes

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