Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000050 Solanum tuberosum HOM05D001670 ORTHO05D017370 3.8e-131 471.5 232 100.0
PGSC0003DMG400000162 Solanum tuberosum HOM05D001670 ORTHO05D017370 2.2e-94 349.4 214 85.0
PGSC0003DMG402000201 Solanum tuberosum HOM05D001670 ORTHO05D017370 3.3e-66 255.8 220 65.0
CAN.G78.28 Capsicum annuum HOM05D001670 ORTHO05D017370 5.4e-61 238.4 204 67.6
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 3.9e-27 125.9 119 54.6
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 5.1e-27 125.6 110 58.2
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 6.7e-27 125.2 110 58.2
Actinidia12669 Actinidia chinensis HOM05D001670 ORTHO05D002980 8.7e-27 124.8 113 57.5
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 8.7e-27 124.8 95 63.2
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 1.9e-26 123.6 85 69.4
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 1.9e-26 123.6 100 60.0
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 2.5e-26 123.2 104 59.6
Oeu064574.1 Olea europaea HOM05D001670 ORTHO05D002980 2.5e-26 123.2 99 58.6
TAR374G0935 Trochodendron aralioides HOM05D001670 ORTHO05D002980 2.5e-26 123.2 110 57.3
CSS0023490 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 3.3e-26 122.9 108 58.3
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 3.3e-26 122.9 108 58.3
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 3.3e-26 122.9 115 52.2
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 3.3e-26 122.9 112 54.5
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 3.3e-26 122.9 95 62.1
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 7.4e-26 121.7 110 56.4
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 7.4e-26 121.7 131 48.1
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 1.3e-25 120.9 110 56.4
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 1.3e-25 120.9 121 52.9
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 1.6e-25 120.6 110 56.4
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.6e-25 120.6 102 57.8
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 2.2e-25 120.2 95 60.0
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 2.2e-25 120.2 106 55.7
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 2.2e-25 120.2 103 56.3
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 3.7e-25 119.4 95 58.9
Cpa.g.sc914.1 Carica papaya HOM05D001670 ORTHO05D002980 3.7e-25 119.4 106 55.7
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 4.8e-25 119.0 101 55.4
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 4.8e-25 119.0 101 55.4
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 4.8e-25 119.0 101 55.4
GSVIVG01018721001 Vitis vinifera HOM05D001670 ORTHO05D002980 4.8e-25 119.0 120 52.5
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 6.3e-25 118.6 101 55.4
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 6.3e-25 118.6 115 49.6
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 6.3e-25 118.6 121 51.2
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 8.2e-25 118.2 102 54.9
Lj7C538G19 Lonicera japonica HOM05D001670 ORTHO05D002980 1.1e-24 117.9 107 56.1
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 1.1e-24 117.9 101 54.5
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 1.4e-24 117.5 108 53.7
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 1.4e-24 117.5 102 52.9
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 1.4e-24 117.5 99 56.6
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 1.4e-24 117.5 117 52.1
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 1.4e-24 117.5 104 57.7
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 1.4e-24 117.5 124 52.4
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 1.8e-24 117.1 107 55.1
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 1.8e-24 117.1 108 52.8
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 1.8e-24 117.1 117 51.3
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.8e-24 117.1 95 58.9
Gohir.D11G082400 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.8e-24 117.1 95 58.9
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 1.8e-24 117.1 95 58.9
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 1.8e-24 117.1 120 51.7
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 1.8e-24 117.1 110 52.7
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 1.8e-24 117.1 109 55.0
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 1.8e-24 117.1 95 58.9
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 2.4e-24 116.7 95 57.9
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 2.4e-24 116.7 108 53.7
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 2.4e-24 116.7 95 57.9
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 2.4e-24 116.7 127 44.9
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 2.4e-24 116.7 95 57.9
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 2.4e-24 116.7 104 56.7
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 3.1e-24 116.3 99 57.6
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 3.1e-24 116.3 107 56.1
CDE09G0971 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 4.1e-24 115.9 127 46.5
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 4.1e-24 115.9 95 57.9
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 4.1e-24 115.9 108 51.9
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 5.3e-24 115.5 108 51.9
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 5.3e-24 115.5 95 57.9
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 6.9e-24 115.2 108 51.9
CDE11G0646 Ceratophyllum demersum HOM05D001670 ORTHO05D017370 6.9e-24 115.2 99 55.6
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 6.9e-24 115.2 117 50.4
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 6.9e-24 115.2 108 54.6
MBI18_g42384_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D017370 9.0e-24 114.8 110 54.5
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 9.0e-24 114.8 95 56.8
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 1.2e-23 114.4 130 48.5
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 1.2e-23 114.4 108 56.5
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 1.5e-23 114.0 101 52.5
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 2.0e-23 113.6 117 49.6
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 2.0e-23 113.6 95 55.8
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 3.4e-23 112.8 96 55.2
SHI13578 Sapria himalayana HOM05D001670 ORTHO05D002980 3.4e-23 112.8 85 63.5
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 4.5e-23 112.5 95 56.8
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 4.5e-23 112.5 131 48.9
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 4.5e-23 112.5 95 54.7
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 5.9e-23 112.1 106 51.9
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 5.9e-23 112.1 95 56.8
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 5.9e-23 112.1 131 49.6
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 7.6e-23 111.7 85 61.2
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 7.6e-23 111.7 92 56.5
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 1.0e-22 111.3 108 51.9
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 1.3e-22 110.9 85 62.4
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 1.7e-22 110.5 105 52.4
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.2e-22 110.2 95 54.7
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.2e-22 110.2 95 54.7
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 2.9e-22 109.8 95 54.7
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.9e-22 109.8 95 54.7
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.9e-22 109.8 95 54.7
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.9e-22 109.8 95 54.7
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.9e-22 109.8 95 54.7
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 2.9e-22 109.8 117 50.4
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 3.8e-22 109.4 92 57.6
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 3.8e-22 109.4 95 53.7
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 5.0e-22 109.0 104 52.9
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 5.0e-22 109.0 94 54.3
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 6.5e-22 108.6 100 55.0
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 8.5e-22 108.2 103 49.5
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 1.1e-21 107.8 111 49.5
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 1.1e-21 107.8 98 54.1
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 1.4e-21 107.5 85 60.0
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 1.4e-21 107.5 85 60.0
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 1.4e-21 107.5 85 60.0
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 1.9e-21 107.1 109 49.5
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 2.5e-21 106.7 127 45.7
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 3.2e-21 106.3 109 49.5
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 4.2e-21 105.9 127 45.7
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 4.2e-21 105.9 96 55.2
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 5.5e-21 105.5 85 57.6
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 5.5e-21 105.5 85 57.6
BcaNung05012 Brassica carinata HOM05D001670 ORTHO05D002980 5.5e-21 105.5 127 46.5
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 5.5e-21 105.5 85 57.6
A09p69240 Brassica napus HOM05D001670 ORTHO05D002980 5.5e-21 105.5 127 46.5
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 5.5e-21 105.5 127 46.5
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 5.5e-21 105.5 85 57.6
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 5.5e-21 105.5 127 46.5
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 5.5e-21 105.5 85 57.6
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 5.5e-21 105.5 85 57.6
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 5.5e-21 105.5 85 57.6
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 7.2e-21 105.1 85 58.8
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 7.2e-21 105.1 121 46.3
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 7.2e-21 105.1 126 46.8
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 9.4e-21 104.8 126 45.2
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 9.4e-21 104.8 126 45.2
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 9.4e-21 104.8 126 45.2
Thecc.03G154200 Theobroma cacao HOM05D001670 ORTHO05D002980 9.4e-21 104.8 128 45.3
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 9.4e-21 104.8 98 52.0
Aqoxy4G01930 Aquilegia oxysepala HOM05D001670 ORTHO05D017370 1.2e-20 104.4 113 45.1
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 1.6e-20 104.0 85 54.1
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.6e-20 104.0 92 54.3
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 2.7e-20 103.2 112 45.5
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 2.7e-20 103.2 98 51.0
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 3.6e-20 102.8 96 54.2
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 7.9e-20 101.7 127 42.5
Actinidia24999 Actinidia chinensis HOM05D001670 ORTHO05D002980 1.4e-19 100.9 120 45.0
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 1.4e-19 100.9 84 58.3
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 3.9e-19 99.4 99 51.5
Lsat_1_v5_gn_4_44320 Lactuca sativa HOM05D001670 ORTHO05D002980 6.7e-19 98.6 114 44.7
Lsat_1_v5_gn_4_44300 Lactuca sativa HOM05D001670 ORTHO05D017370 1.1e-18 97.8 90 48.9
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 9.7e-18 94.7 92 51.1
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 2.8e-17 93.2 104 47.1
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 4.8e-17 92.4 99 48.5
Lsat_1_v5_gn_5_55541 Lactuca sativa HOM05D000041 ORTHO05D000452 8.2e-17 91.7 81 51.9
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 2.0e-15 87.0 96 49.0
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 5.9e-15 85.5 127 38.6
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 7.2e-13 78.6 85 45.9
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 2.7e-12 76.6 107 38.3
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 7.4e-10 68.6 120 34.2
C08p54060 Brassica napus HOM05D001670 ORTHO05D002980 9.7e-10 68.2 57 56.1
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 7.7e-07 58.5 95 37.9
Pp3c21_18750 Physcomitrium patens HOM05D001670 ORTHO05D017370 2.2e-06 57.0 49 49.0


User provided reference genes

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