Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 1.2e-121 439.9 220 100.0
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 5.5e-87 324.7 261 69.0
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 7.9e-62 241.1 263 52.1
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 2.3e-61 239.6 250 57.6
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.1e-55 220.7 260 49.6
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 2.5e-55 219.5 259 50.2
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 9.4e-55 217.6 265 49.1
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.6e-54 216.9 264 50.0
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 2.0e-52 209.9 260 48.5
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 4.4e-52 208.8 257 49.8
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 4.4e-52 208.8 244 52.0
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 4.4e-52 208.8 241 50.2
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 9.7e-52 207.6 260 47.3
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 9.7e-52 207.6 260 48.5
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 9.7e-52 207.6 260 46.9
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.3e-51 207.2 260 46.9
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 4.8e-51 205.3 260 46.5
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 4.8e-51 205.3 260 46.5
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 4.8e-51 205.3 260 48.1
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 8.2e-51 204.5 260 46.5
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 8.2e-51 204.5 259 47.1
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 8.2e-51 204.5 259 47.1
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 1.8e-50 203.4 253 48.2
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 2.4e-50 203.0 259 49.4
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 7.0e-50 201.4 249 47.0
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 7.0e-50 201.4 252 47.6
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 2.6e-49 199.5 225 50.2
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 3.5e-49 199.1 244 48.0
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 3.5e-49 199.1 197 56.3
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 3.5e-49 199.1 244 48.0
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 5.9e-49 198.4 259 45.6
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 5.9e-49 198.4 258 46.9
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 7.7e-49 198.0 279 44.1
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 7.7e-49 198.0 255 47.1
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 7.7e-49 198.0 287 43.6
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 1.7e-48 196.8 259 46.3
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 3.8e-48 195.7 259 45.2
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 5.0e-48 195.3 239 49.4
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 5.0e-48 195.3 233 50.2
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 6.5e-48 194.9 269 46.1
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 6.5e-48 194.9 258 46.1
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 1.5e-47 193.7 256 45.7
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 1.9e-47 193.4 262 46.6
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 9.4e-47 191.0 164 63.4
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 1.6e-46 190.3 232 47.8
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 2.3e-45 186.4 275 43.6
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 3.0e-45 186.0 242 44.2
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 3.0e-45 186.0 257 42.8
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 4.0e-45 185.7 229 45.4
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 5.2e-45 185.3 250 43.6
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 8.8e-45 184.5 165 60.6
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 8.8e-45 184.5 255 44.3
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 1.5e-44 183.7 226 48.2
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 2.0e-44 183.3 232 44.8
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.0e-44 183.3 255 43.5
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 3.3e-44 182.6 235 45.1
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 7.5e-44 181.4 162 62.3
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 1.7e-43 180.3 258 45.0
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 2.8e-43 179.5 261 42.5
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 2.8e-43 179.5 165 59.4
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 2.8e-43 179.5 261 44.4
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 3.7e-43 179.1 261 42.1
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.7e-43 179.1 165 59.4
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 6.3e-43 178.3 285 41.1
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 1.1e-42 177.6 217 47.0
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 1.4e-42 177.2 257 43.2
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 1.4e-42 177.2 259 42.9
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 1.8e-42 176.8 259 43.6
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 3.1e-42 176.0 203 48.3
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 4.1e-42 175.6 258 41.5
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 4.1e-42 175.6 307 39.4
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 7.0e-42 174.9 242 43.4
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 9.1e-42 174.5 259 43.6
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 5.9e-41 171.8 254 40.6
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 2.2e-40 169.9 250 42.0
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 2.2e-40 169.9 254 40.9
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 2.2e-40 169.9 236 43.6
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 2.2e-40 169.9 262 41.6
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 3.8e-40 169.1 147 61.2
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 6.5e-40 168.3 211 45.5
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 1.1e-39 167.5 260 42.3
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 3.2e-39 166.0 256 41.0
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 4.2e-39 165.6 221 42.5
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 7.2e-39 164.9 263 42.6
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 6.1e-38 161.8 162 55.6
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 8.0e-38 161.4 158 56.3
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 8.0e-38 161.4 250 40.0
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 3.4e-36 156.0 224 41.5
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 1.3e-35 154.1 258 40.3
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 3.7e-35 152.5 226 40.3
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.8e-34 150.2 258 40.3
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 2.4e-34 149.8 168 51.2
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 9.1e-34 147.9 168 51.2
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 1.0e-32 144.4 177 49.2
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 2.2e-32 143.3 159 50.3
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.5e-31 140.6 210 42.9
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 1.9e-31 140.2 116 62.9
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 1.9e-31 140.2 116 62.9
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 3.2e-31 139.4 112 62.5
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.8e-27 126.3 245 33.9
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 1.6e-25 120.6 94 62.8
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 2.9e-24 116.3 453 26.7
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 2.9e-24 116.3 119 59.7
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.7e-19 100.5 220 29.1
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 2.7e-17 93.2 125 47.2
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 4.6e-17 92.4 83 60.2
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 6.6e-16 88.6 118 43.2
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 1.2e-14 84.3 235 29.4
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 3.6e-14 82.8 86 53.5
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 3.1e-13 79.7 159 34.6
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 9.8e-12 74.7 53 66.0
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 3.7e-11 72.8 88 48.9
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 5.4e-10 68.9 85 45.9
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 2.3e-08 63.5 81 37.0
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 8.6e-08 61.6 57 47.4
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 5.6e-07 58.9 133 31.6
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.2e-06 57.8 59 54.2


User provided reference genes

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