Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 3.7e-228 795.0 571 100.0
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 8.2e-119 431.8 534 60.3
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 1.0e-116 424.9 573 55.3
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 4.4e-112 409.5 573 54.6
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 1.4e-110 404.4 519 70.9
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 3.1e-110 403.3 543 61.9
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 4.1e-110 402.9 488 66.2
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 1.9e-107 394.0 529 61.6
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 2.5e-107 393.7 537 63.9
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 5.5e-107 392.5 548 60.8
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 2.6e-104 383.6 586 61.1
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 2.8e-103 380.2 569 57.6
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 4.1e-102 376.3 507 51.5
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 1.6e-101 374.4 571 52.4
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 1.3e-100 371.3 548 53.6
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 2.9e-100 370.2 548 53.5
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 3.8e-100 369.8 529 59.5
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 5.0e-100 369.4 489 66.5
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 5.5e-99 365.9 526 58.9
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 9.4e-99 365.2 469 62.7
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 2.7e-98 363.6 518 62.4
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 3.6e-98 363.2 586 54.3
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 6.1e-98 362.5 521 63.9
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 6.1e-98 362.5 500 56.4
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 8.0e-98 362.1 558 63.4
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 4.0e-97 359.8 471 56.5
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 4.0e-97 359.8 509 66.8
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 1.2e-96 358.2 472 63.1
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 1.2e-96 358.2 527 48.4
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 2.0e-96 357.5 493 65.5
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 3.4e-96 356.7 476 54.6
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 4.4e-96 356.3 520 65.8
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 5.7e-96 355.9 562 51.2
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 1.7e-95 354.4 496 55.4
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 4.9e-95 352.8 561 59.5
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 2.4e-94 350.5 490 60.6
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 7.7e-93 345.5 499 57.9
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 7.7e-93 345.5 471 56.9
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 1.1e-91 341.7 496 52.6
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 2.5e-91 340.5 521 64.1
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 7.3e-91 339.0 472 64.2
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 1.0e-89 335.1 502 65.5
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 2.6e-88 330.5 466 54.3
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 3.4e-88 330.1 458 62.4
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 9.8e-88 328.6 532 57.3
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 9.8e-88 328.6 631 45.3
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 1.8e-86 324.3 472 61.2
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 1.8e-86 324.3 491 61.9
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 5.4e-86 322.8 474 66.7
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 2.0e-85 320.9 444 58.1
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 3.9e-84 316.6 469 61.2
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 6.6e-84 315.8 523 59.1
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 1.5e-83 314.7 505 57.8
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 1.9e-83 314.3 479 51.6
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 2.1e-82 310.8 477 65.0
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 2.8e-82 310.5 472 61.4
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 2.8e-82 310.5 471 65.6
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 3.6e-82 310.1 473 58.8
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 3.6e-82 310.1 433 57.7
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 6.2e-82 309.3 474 64.1
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 1.0e-81 308.5 472 65.5
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 6.8e-81 305.8 428 64.5
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 4.9e-79 299.7 514 58.9
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 1.1e-78 298.5 490 59.6
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 1.4e-78 298.1 518 57.9
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 2.4e-78 297.4 472 59.1
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 4.1e-78 296.6 469 62.5
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 7.0e-78 295.8 514 58.4
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 1.2e-77 295.0 514 56.8
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 1.2e-77 295.0 561 54.7
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 3.5e-77 293.5 458 57.6
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 1.0e-76 292.0 472 57.6
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 2.3e-76 290.8 471 61.8
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 3.0e-76 290.4 473 48.8
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 1.1e-75 288.5 475 61.1
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 1.5e-75 288.1 414 63.5
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 2.8e-74 283.9 469 61.4
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 1.4e-73 281.6 551 55.4
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 1.8e-73 281.2 491 50.1
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 1.8e-73 281.2 546 50.7
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 5.2e-73 279.6 511 44.0
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 6.8e-73 279.3 477 56.8
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 8.9e-73 278.9 468 56.2
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 5.8e-72 276.2 487 59.5
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 6.4e-71 272.7 458 45.0
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 1.4e-70 271.6 476 59.2
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 1.9e-70 271.2 466 60.1
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 5.4e-70 269.6 469 60.1
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 2.7e-69 267.3 475 62.7
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 3.5e-69 266.9 469 59.9
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 3.5e-69 266.9 520 51.0
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 1.0e-68 265.4 331 55.6
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 1.7e-68 264.6 519 51.6
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 2.5e-67 260.8 462 60.2
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 2.5e-67 260.8 294 69.4
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 5.6e-67 259.6 500 40.0
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 1.1e-65 255.4 489 41.1
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 2.2e-63 247.7 474 36.9
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 1.9e-62 244.6 455 48.4
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 1.1e-59 235.3 347 57.6
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 6.2e-58 229.6 535 44.7
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 2.0e-56 224.6 423 55.6
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 1.3e-47 195.3 213 50.2
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 1.4e-46 191.8 292 59.6
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 1.2e-45 188.7 211 58.8
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 8.7e-44 182.6 205 71.7
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 1.7e-39 168.3 331 49.2
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.2e-32 145.6 132 54.5
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 8.4e-31 139.4 120 58.3
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 5.1e-28 130.2 99 64.6
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 8.7e-28 129.4 420 39.0
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 3.7e-26 124.0 333 33.0
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 4.5e-24 117.1 331 26.9
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 1.3e-23 115.5 146 44.5
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.3e-18 99.0 337 25.2
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.1e-17 95.9 85 55.3
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 1.4e-17 95.5 156 38.5
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.2e-16 92.4 358 38.8
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 1.8e-12 78.6 148 31.1
Lj1C1019T10 Lonicera japonica HOM05D005626 ORTHO05D007372 3.0e-12 77.8 84 50.0
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 5.1e-12 77.0 108 40.7
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 8.8e-12 76.3 146 30.1
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 2.0e-11 75.1 76 51.3
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.3e-10 72.4 141 30.5
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 1.7e-10 72.0 59 61.0
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 1.1e-09 69.3 53 62.3
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 3.1e-09 67.8 57 57.9
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 4.5e-08 63.9 48 60.4
QL09p008133 Quercus lobata HOM05D005626 ORTHO05D007372 7.7e-08 63.2 38 76.3
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 5.0e-07 60.5 93 59.1


User provided reference genes

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