Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 0.0e+00 1102.4 536 100.0
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 7.1e-274 946.8 539 84.8
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 7.4e-271 936.8 539 83.7
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 2.1e-270 935.3 545 82.8
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 4.1e-269 931.0 536 82.6
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 1.5e-268 929.1 540 82.8
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 3.4e-268 927.9 536 81.7
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 1.7e-267 925.6 537 82.5
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 1.7e-267 925.6 536 82.6
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 1.7e-267 925.6 536 83.2
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 2.2e-267 925.2 536 84.7
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 8.4e-267 923.3 539 82.2
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.4e-266 922.5 537 83.1
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 1.4e-266 922.5 537 83.2
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 2.5e-266 921.8 535 82.8
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 4.2e-266 921.0 537 82.9
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 4.2e-266 921.0 536 83.4
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 9.3e-266 919.8 544 81.6
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 1.2e-265 919.5 537 82.7
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 1.6e-265 919.1 540 82.6
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 4.6e-265 917.5 562 79.0
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 4.6e-265 917.5 536 81.9
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 6.1e-265 917.1 536 83.0
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 5.1e-264 914.1 540 82.4
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.9e-263 912.1 539 81.1
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 3.7e-262 907.9 545 81.5
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 4.8e-262 907.5 539 82.0
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 4.8e-262 907.5 538 82.3
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 6.3e-262 907.1 537 81.6
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 1.8e-261 905.6 537 81.2
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 2.4e-261 905.2 536 82.1
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 3.1e-261 904.8 537 81.9
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 5.3e-261 904.0 536 81.3
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 5.3e-261 904.0 537 81.9
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 6.9e-261 903.7 537 81.9
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 1.2e-260 902.9 536 81.0
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 3.4e-260 901.4 536 80.6
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 5.9e-260 900.6 542 81.2
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 7.7e-260 900.2 536 80.8
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.3e-259 899.4 571 77.9
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 2.9e-259 898.3 532 79.9
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 8.5e-259 896.7 541 80.4
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 8.5e-259 896.7 551 79.1
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 8.5e-259 896.7 537 80.8
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 8.5e-259 896.7 558 79.2
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 1.1e-258 896.3 532 80.8
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 1.1e-258 896.3 526 81.7
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 1.9e-258 895.6 529 81.5
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 1.9e-258 895.6 520 82.3
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 2.5e-258 895.2 536 80.2
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 7.2e-258 893.6 557 78.6
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 1.2e-257 892.9 520 81.9
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 1.6e-257 892.5 532 81.4
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 1.6e-257 892.5 536 79.7
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 2.1e-257 892.1 532 81.2
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 4.6e-257 891.0 593 75.5
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 7.9e-257 890.2 521 82.3
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.8e-256 889.0 537 81.6
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 3.0e-256 888.3 537 81.2
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 2.5e-255 885.2 534 80.9
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 1.3e-254 882.9 536 79.9
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 1.7e-254 882.5 524 81.5
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 9.1e-253 876.7 521 80.4
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 2.6e-252 875.2 538 79.7
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 7.7e-252 873.6 541 79.5
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 2.9e-251 871.7 539 77.7
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 1.4e-250 869.4 529 80.0
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 7.2e-250 867.1 536 78.9
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 9.4e-250 866.7 525 80.6
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 2.1e-249 865.5 574 73.7
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 2.1e-249 865.5 536 78.5
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 4.7e-249 864.4 527 79.3
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 4.7e-249 864.4 527 79.3
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 1.8e-248 862.4 538 78.6
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 1.8e-248 862.4 521 78.5
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 1.8e-248 862.4 539 78.5
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 2.3e-248 862.1 524 79.4
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 2.3e-248 862.1 538 78.4
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 2.3e-248 862.1 535 78.5
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 1.5e-247 859.4 543 77.3
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 4.4e-247 857.8 500 81.0
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 4.4e-247 857.8 536 78.4
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 2.2e-246 855.5 539 76.8
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 4.8e-246 854.4 539 76.6
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 5.3e-245 850.9 525 78.9
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 3.5e-244 848.2 539 77.0
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 4.5e-244 847.8 547 76.6
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 7.7e-244 847.0 536 77.2
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.0e-243 846.7 522 77.8
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 1.5e-242 842.8 540 76.7
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 3.2e-242 841.6 541 76.9
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 2.1e-241 839.0 469 85.3
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 2.8e-238 828.6 526 77.2
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 1.4e-237 826.2 483 81.0
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 5.9e-236 820.8 544 73.5
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 6.5e-235 817.4 561 73.8
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 8.5e-235 817.0 546 75.3
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 4.2e-234 814.7 546 75.3
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 7.2e-234 813.9 561 73.6
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 8.0e-233 810.4 532 74.2
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 1.8e-229 799.3 539 72.5
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 1.8e-229 799.3 538 73.0
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.0e-227 793.5 538 72.5
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 7.3e-218 760.8 477 75.5
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 1.8e-213 746.1 537 68.0
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 1.3e-211 740.0 526 69.8
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 1.2e-207 726.9 475 74.1
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 8.3e-206 720.7 426 78.9
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 1.6e-204 716.5 398 82.7
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 9.5e-202 707.2 433 79.7
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 2.4e-189 666.0 392 81.9
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 1.1e-186 657.1 398 77.1
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.5e-186 656.8 511 65.9
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 3.1e-176 622.5 332 85.5
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 1.4e-157 560.5 489 57.3
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.8e-155 553.5 400 70.8
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 1.3e-153 547.4 540 53.9
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 1.5e-151 540.4 283 87.3
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 3.4e-151 539.3 419 67.1
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 4.8e-137 492.3 407 62.2
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 6.5e-134 481.9 451 53.7
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 9.4e-133 478.0 346 67.3
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 3.0e-131 473.0 463 52.3
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 1.7e-126 457.2 337 69.1
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 2.8e-108 396.7 256 76.2
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 3.0e-94 350.1 231 78.8
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 8.3e-89 332.0 181 85.1
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 8.1e-84 315.5 182 80.8
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.5e-74 284.6 172 76.7
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 1.9e-56 224.6 135 76.3
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 4.3e-45 186.8 115 78.3
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 2.0e-42 177.9 102 78.4
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 2.6e-34 151.0 81 87.7
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 4.3e-29 133.7 67 89.6
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 3.3e-21 107.5 63 81.0
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 3.3e-21 107.5 63 81.0
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 5.7e-21 106.7 58 87.9
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 5.3e-19 100.1 53 84.9
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 1.7e-17 95.1 50 84.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 1.6e-15 88.6 78 60.3


User provided reference genes

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