Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 0.0e+00 1094.7 561 100.0
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 7.1e-216 754.2 564 71.5
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 1.4e-123 447.6 567 45.1
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 7.8e-122 441.8 562 44.7
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 3.0e-121 439.9 562 43.8
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 3.3e-120 436.4 560 43.8
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 1.2e-119 434.5 562 43.6
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 2.9e-108 396.7 560 40.5
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 5.6e-104 382.5 506 43.5
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 2.4e-102 377.1 554 40.8
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 3.1e-102 376.7 602 37.7
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 2.0e-101 374.0 564 38.8
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 2.2e-100 370.5 562 38.8
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 4.2e-99 366.3 556 38.7
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 7.1e-99 365.5 560 39.6
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 1.6e-98 364.4 563 40.7
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 2.1e-98 364.0 573 37.7
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 1.3e-97 361.3 559 37.7
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 1.8e-97 360.9 555 37.7
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 2.3e-97 360.5 573 38.6
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 5.1e-97 359.4 573 40.3
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 6.7e-97 359.0 585 39.3
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 8.7e-97 358.6 563 39.6
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 1.1e-96 358.2 557 38.2
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 1.1e-96 358.2 558 38.7
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 1.5e-96 357.8 578 38.4
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 2.5e-96 357.1 574 38.5
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 7.4e-96 355.5 570 39.5
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 9.6e-96 355.1 557 38.4
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 1.6e-95 354.4 561 39.2
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 6.2e-95 352.4 600 38.0
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 1.1e-94 351.7 557 36.6
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 1.1e-94 351.7 554 38.4
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 1.8e-94 350.9 557 37.5
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 3.1e-94 350.1 555 38.2
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 9.0e-94 348.6 581 38.6
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 1.2e-93 348.2 569 37.4
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 1.5e-93 347.8 554 37.9
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 1.5e-93 347.8 554 38.3
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 2.6e-93 347.1 554 39.4
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 7.6e-93 345.5 554 39.0
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 1.3e-92 344.7 554 38.6
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 2.9e-92 343.6 535 38.3
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 3.8e-92 343.2 574 38.2
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 1.4e-91 341.3 561 36.4
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 1.9e-91 340.9 576 37.8
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 2.4e-91 340.5 570 35.6
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 5.5e-91 339.3 575 37.2
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 9.3e-91 338.6 567 36.5
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 1.2e-90 338.2 544 37.5
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 2.1e-90 337.4 564 34.9
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 3.5e-90 336.7 544 39.5
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 7.9e-90 335.5 557 36.8
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 1.8e-89 334.3 568 36.1
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 1.8e-89 334.3 571 35.0
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 1.8e-89 334.3 553 37.6
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 2.3e-89 334.0 560 37.0
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 3.0e-89 333.6 568 35.0
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 3.0e-89 333.6 563 36.8
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.9e-88 330.9 545 39.6
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 5.6e-88 329.3 536 38.2
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 7.4e-88 328.9 570 34.4
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 1.6e-87 327.8 512 38.9
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 1.6e-87 327.8 570 35.1
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 1.6e-87 327.8 560 37.9
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 2.1e-87 327.4 551 36.5
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 6.2e-87 325.9 534 37.6
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 2.4e-86 323.9 552 35.9
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 5.3e-86 322.8 560 36.4
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 3.4e-85 320.1 571 34.3
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 4.5e-85 319.7 700 32.4
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 7.6e-85 318.9 556 36.3
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 1.7e-84 317.8 572 36.0
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 2.2e-84 317.4 555 36.2
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 6.5e-84 315.8 593 34.2
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 8.4e-84 315.5 531 38.2
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 2.5e-83 313.9 568 33.8
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 3.2e-83 313.5 556 35.8
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 2.7e-82 310.5 577 34.3
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 8.7e-81 305.4 563 35.3
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 7.4e-80 302.4 555 34.4
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 2.8e-79 300.4 539 38.4
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 3.1e-78 297.0 478 39.1
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 7.6e-77 292.4 508 36.6
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 2.5e-75 287.3 586 34.5
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 3.2e-75 287.0 416 41.6
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 9.3e-75 285.4 593 33.1
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 6.1e-74 282.7 648 32.6
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 1.1e-70 271.9 502 36.7
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 1.0e-65 255.4 489 35.4
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 5.1e-65 253.1 407 36.1
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 4.1e-62 243.4 468 34.2
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 6.1e-58 229.6 440 36.4
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 8.8e-57 225.7 422 35.8
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.6e-53 214.2 406 37.4
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 5.0e-52 209.9 422 34.4
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 9.4e-51 205.7 397 34.8
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 6.3e-47 193.0 194 47.9
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.3e-44 185.3 206 44.7
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 8.0e-42 176.0 493 31.6
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 8.0e-42 176.0 477 31.4
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 8.8e-41 172.6 536 28.7
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 9.8e-40 169.1 365 34.5
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 4.8e-39 166.8 621 28.8
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 6.8e-33 146.4 638 25.1
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 5.7e-32 143.3 212 41.0
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.5e-27 127.9 149 45.0
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 9.5e-27 125.9 129 48.8
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.7e-23 115.2 318 30.5
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.7e-23 114.0 120 50.0
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 6.4e-23 113.2 138 46.4
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 1.4e-17 95.5 223 35.0
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 3.4e-16 90.9 79 58.2
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 4.9e-15 87.0 163 31.9
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 3.2e-14 84.3 121 39.7
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 1.2e-13 82.4 188 32.4
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 2.6e-08 64.7 59 47.5
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 4.4e-08 63.9 66 47.0
MCO11G052 Micromonas commoda HOM05D006560 ORTHO05D008164 9.2e-06 56.2 158 29.7


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