Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0307200 Oryza sativa ssp. japonica HOM05D006776 ORTHO05D007603 3.6e-103 378.3 192 100.0
Zm00001eb147340 Zea mays HOM05D006776 ORTHO05D007603 2.1e-90 335.9 190 88.9
CARHR027300 Cardamine hirsuta HOM05D006776 ORTHO05D007603 8.2e-71 270.8 191 69.6
HPP92_001976 Vanilla planifolia HOM05D006776 ORTHO05D007603 1.5e-69 266.5 191 70.2
Thhalv10007615m.g Eutrema salsugineum HOM05D006776 ORTHO05D007603 5.8e-69 264.6 191 68.1
PGR083G0271 Punica granatum HOM05D006776 ORTHO05D007603 1.0e-68 263.8 191 67.5
AT1G27840 Arabidopsis thaliana HOM05D006776 ORTHO05D007603 1.3e-68 263.5 191 67.5
Hund23872 Selenicereus undatus HOM05D006776 ORTHO05D007603 2.9e-68 262.3 190 67.9
THA.LOC104814190 Tarenaya hassleriana HOM05D006776 ORTHO05D007603 4.9e-68 261.5 191 68.1
Aa31sc113G60 Aethionema arabicum HOM05D006776 ORTHO05D007603 1.1e-67 260.4 191 66.0
AL1G41330 Arabidopsis lyrata HOM05D006776 ORTHO05D007603 4.2e-67 258.5 191 66.5
Sp1g24040 Schrenkiella parvula HOM05D006776 ORTHO05D007603 5.5e-67 258.1 191 66.5
Atru.chr13.832 Acer truncatum HOM05D006776 ORTHO05D007603 7.1e-67 257.7 191 66.0
Actinidia08248 Actinidia chinensis HOM05D006776 ORTHO05D007603 9.3e-67 257.3 191 64.4
DCAR_012816 Daucus carota HOM05D006776 ORTHO05D007603 9.3e-67 257.3 191 67.0
ECA232G1156 Erigeron canadensis HOM05D006776 ORTHO05D007603 1.2e-66 256.9 191 64.9
Dinv39223 Davidia involucrata HOM05D006776 ORTHO05D007603 1.6e-66 256.5 191 64.9
Prupe.1G422900 Prunus persica HOM05D006776 ORTHO05D007603 1.6e-66 256.5 191 66.0
Hma1.2p1_0819F.1_g223700 Hydrangea macrophylla HOM05D006776 ORTHO05D007603 2.1e-66 256.1 191 66.0
Hma1.2p1_0819F.1_g223710 Hydrangea macrophylla HOM05D006776 ORTHO05D007603 2.1e-66 256.1 191 66.0
Potri.014G016100 Populus trichocarpa HOM05D006776 ORTHO05D007603 2.7e-66 255.8 194 62.9
TAR376G1186 Trochodendron aralioides HOM05D006776 ORTHO05D007603 2.7e-66 255.8 191 68.1
EL10Ac1g02384 Beta vulgaris HOM05D006776 ORTHO05D007603 3.5e-66 255.4 191 64.9
Cpa.g.sc142.25 Carica papaya HOM05D006776 ORTHO05D007603 4.6e-66 255.0 191 66.0
Eucgr.F00083 Eucalyptus grandis HOM05D006776 ORTHO05D007603 4.6e-66 255.0 191 66.0
Nn1g04555 Nelumbo nucifera HOM05D006776 ORTHO05D007603 4.6e-66 255.0 183 67.2
RcHm_v2.0_Chr6g0309581 Rosa chinensis HOM05D006776 ORTHO05D007603 6.0e-66 254.6 191 66.0
Cfa013778 Carpinus fangiana HOM05D006776 ORTHO05D007603 7.9e-66 254.2 191 64.9
Manes.05G181900 Manihot esculenta HOM05D006776 ORTHO05D007603 7.9e-66 254.2 191 66.0
QL12p038088 Quercus lobata HOM05D006776 ORTHO05D007603 7.9e-66 254.2 192 64.6
GSVIVG01009344001 Vitis vinifera HOM05D006776 ORTHO05D007603 7.9e-66 254.2 183 67.2
Sabra14G0010000 Salix brachista HOM05D006776 ORTHO05D007603 1.0e-65 253.8 194 63.4
BcaNung06155 Brassica carinata HOM05D006776 ORTHO05D007603 1.8e-65 253.1 192 66.1
CiPaw.07G175000 Carya illinoinensis HOM05D006776 ORTHO05D007603 1.8e-65 253.1 191 64.9
FAN15G0723 Fragaria x ananassa HOM05D006776 ORTHO05D007603 1.8e-65 253.1 191 65.4
Ciclev10001152m.g Citrus clementina HOM05D006776 ORTHO05D007603 2.3e-65 252.7 191 64.9
FAN20G0940 Fragaria x ananassa HOM05D006776 ORTHO05D007603 2.3e-65 252.7 191 65.4
FAN24G3456 Fragaria x ananassa HOM05D006776 ORTHO05D007603 2.3e-65 252.7 191 66.0
Rhsim07G0219900 Rhododendron simsii HOM05D006776 ORTHO05D007603 2.3e-65 252.7 191 64.4
BraA09t39342Z Brassica rapa HOM05D006776 ORTHO05D007603 3.0e-65 252.3 191 66.0
Solyc12g088340.2 Solanum lycopersicum HOM05D006776 ORTHO05D007603 3.9e-65 251.9 191 65.4
Sopen12g030330 Solanum pennellii HOM05D006776 ORTHO05D007603 3.9e-65 251.9 191 65.4
FvH4_2g33100 Fragaria vesca HOM05D006776 ORTHO05D007603 5.1e-65 251.5 191 65.4
Lj4A758G74 Lonicera japonica HOM05D006776 ORTHO05D007603 5.1e-65 251.5 192 66.1
PGSC0003DMG400011544 Solanum tuberosum HOM05D006776 ORTHO05D007603 5.1e-65 251.5 191 65.4
arahy.Tifrunner.gnm1.ann1.YEFH3D Arachis hypogaea HOM05D006776 ORTHO05D007603 8.7e-65 250.8 186 65.6
FAN27G1522 Fragaria x ananassa HOM05D006776 ORTHO05D007603 8.7e-65 250.8 191 64.4
A09p38320 Brassica napus HOM05D006776 ORTHO05D007603 1.1e-64 250.4 191 66.0
MELO3C010806.2 Cucumis melo HOM05D006776 ORTHO05D007603 1.1e-64 250.4 190 65.3
CsaV3_2G026140 Cucumis sativus L. HOM05D006776 ORTHO05D007603 1.1e-64 250.4 190 65.3
Lsat_1_v5_gn_4_131640 Lactuca sativa HOM05D006776 ORTHO05D007603 1.1e-64 250.4 191 63.9
COL.COLO4_28506 Corchorus olitorius HOM05D006776 ORTHO05D007603 1.9e-64 249.6 191 63.4
Aqoxy5G00870 Aquilegia oxysepala HOM05D006776 ORTHO05D007603 2.5e-64 249.2 191 63.9
BcaNung06153 Brassica carinata HOM05D006776 ORTHO05D007603 2.5e-64 249.2 191 65.4
C05p26470 Brassica napus HOM05D006776 ORTHO05D007603 2.5e-64 249.2 191 65.4
BolC5t31368H Brassica oleracea HOM05D006776 ORTHO05D007603 2.5e-64 249.2 191 65.4
MD15G1070100 Malus domestica HOM05D006776 ORTHO05D007603 2.5e-64 249.2 191 64.4
arahy.Tifrunner.gnm1.ann1.SBJ000 Arachis hypogaea HOM05D006776 ORTHO05D007603 3.3e-64 248.8 186 65.1
Gohir.A05G210000 Gossypium hirsutum HOM05D006776 ORTHO05D007603 3.3e-64 248.8 191 62.8
Thecc.08G088800 Theobroma cacao HOM05D006776 ORTHO05D007603 3.3e-64 248.8 191 63.9
Duzib116G0586 Durio zibethinus HOM05D006776 ORTHO05D007603 4.3e-64 248.4 191 63.9
ClCG08G016470 Citrullus lanatus HOM05D006776 ORTHO05D007603 5.7e-64 248.1 190 64.7
CSS0038791 Camellia sinensis var. sinensis HOM05D006776 ORTHO05D007603 7.4e-64 247.7 191 63.9
Gohir.D05G213300 Gossypium hirsutum HOM05D006776 ORTHO05D007603 9.7e-64 247.3 191 62.8
Nitab4.5_0008551g0030 Nicotiana tabacum HOM05D006776 ORTHO05D007603 9.7e-64 247.3 191 62.3
Ah.11g042830 Amaranthus hybridus HOM05D006776 ORTHO05D007603 1.3e-63 246.9 190 66.3
HanXRQChr09g0266761 Helianthus annuus HOM05D006776 ORTHO05D007603 1.3e-63 246.9 191 65.4
Nitab4.5_0002314g0100 Nicotiana tabacum HOM05D006776 ORTHO05D007603 1.3e-63 246.9 191 62.3
PSO017G0681 Papaver somniferum HOM05D006776 ORTHO05D007603 1.3e-63 246.9 191 65.4
Ca_15900_v3 Cicer arietinum L. HOM05D006776 ORTHO05D007603 1.6e-63 246.5 189 63.5
TWI56G0429 Tripterygium wilfordii HOM05D006776 ORTHO05D007603 1.6e-63 246.5 191 62.8
PSO170G0170 Papaver somniferum HOM05D006776 ORTHO05D007603 2.2e-63 246.1 191 65.4
Sed0026542 Sechium edule HOM05D006776 ORTHO05D007603 2.8e-63 245.7 190 64.2
Gorai.009G219900 Gossypium raimondii HOM05D006776 ORTHO05D007603 3.7e-63 245.4 191 62.3
MSTRG.22221 Avicennia marina HOM05D006776 ORTHO05D007603 6.3e-63 244.6 191 63.4
CDE04G2973 Ceratophyllum demersum HOM05D006776 ORTHO05D007603 2.4e-62 242.7 188 62.2
Lj1g0026753 Lotus japonicus HOM05D006776 ORTHO05D007603 4.1e-62 241.9 191 62.3
Cc10_g05780 Coffea canephora HOM05D006776 ORTHO05D007603 9.0e-62 240.7 190 61.6
Lalb_Chr11g0062871 Lupinus albus HOM05D006776 ORTHO05D007603 3.4e-61 238.8 186 60.8
Glyma.04G045700 Glycine max HOM05D006776 ORTHO05D007603 5.9e-61 238.0 190 61.6
CANSAT21G2159 Cannabis sativa HOM05D006776 ORTHO05D007603 1.3e-60 236.9 191 61.3
Oeu053611.1 Olea europaea HOM05D006776 ORTHO05D007603 1.7e-60 236.5 191 61.8
BcaC05g26777 Brassica carinata HOM05D006776 ORTHO05D007603 2.2e-60 236.1 185 64.9
ATR0820G216 Amborella trichopoda HOM05D006776 ORTHO05D007603 2.9e-60 235.7 191 62.3
SEGI_38356 Sequoiadendron giganteum HOM05D006776 ORTHO05D007603 2.9e-60 235.7 191 60.2
Migut.N02781 Erythranthe guttata HOM05D006776 ORTHO05D007603 3.8e-60 235.3 191 59.7
Glyma.06G046400 Glycine max HOM05D006776 ORTHO05D007603 5.0e-60 235.0 186 61.8
Psat5g038960 Pisum sativum HOM05D006776 ORTHO05D007603 4.2e-59 231.9 185 60.5
Peaxi162Scf00160g00527 Petunia axillaris HOM05D006776 ORTHO05D007603 5.5e-59 231.5 168 66.1
unitig_578.g16149 Utricularia gibba HOM05D006776 ORTHO05D007603 1.6e-58 229.9 191 60.7
TPR.G33723 Trifolium pratense HOM05D006776 ORTHO05D007603 2.1e-58 229.6 185 59.5
Phvul.009G071700 Phaseolus vulgaris HOM05D006776 ORTHO05D007603 6.1e-58 228.0 188 58.5
Medtr3g103170 Medicago truncatula HOM05D006776 ORTHO05D007603 1.0e-57 227.3 186 58.1
VMungo1309G0963 Vigna mungo HOM05D006776 ORTHO05D007603 1.8e-57 226.5 186 59.1
Haze_22436 Corylus avellana HOM05D006776 ORTHO05D007603 1.7e-55 219.9 141 73.0
SGA_v2.0_scaffold152G36804 Striga asiatica HOM05D006776 ORTHO05D007603 2.8e-55 219.2 250 48.4
Sc15g0005690 Simmondsia chinensis HOM05D006776 ORTHO05D007603 3.4e-53 212.2 134 71.6
CDE02G3909 Ceratophyllum demersum HOM05D006776 ORTHO05D007603 7.7e-53 211.1 140 69.3
AUR62038776 Chenopodium quinoa HOM05D006776 ORTHO05D007603 1.7e-52 209.9 158 63.3
CBR_g4873 Chara braunii HOM05D006776 ORTHO05D007603 6.1e-50 201.4 167 59.3
MD08G1082700 Malus domestica HOM05D006776 ORTHO05D007603 4.4e-48 195.3 133 69.2
Pp3c22_5850 Physcomitrium patens HOM05D006776 ORTHO05D007603 2.2e-47 193.0 191 50.8
AagrBONN_evm.TU.Sc2ySwM_228.2971 Anthoceros agrestis HOM05D006776 ORTHO05D007603 1.8e-46 189.9 191 50.8
Mapoly0043s0035 Marchantia polymorpha HOM05D006776 ORTHO05D007603 7.7e-45 184.5 191 51.3
SMO203G0215 Selaginella moellendorffii HOM05D006776 ORTHO05D007603 1.1e-43 180.6 184 48.9
SMO353G0131 Selaginella moellendorffii HOM05D006776 ORTHO05D007603 8.5e-36 154.5 191 44.0
Lsat_1_v5_gn_7_88960 Lactuca sativa HOM05D006776 ORTHO05D007603 2.6e-32 142.9 107 62.6
vmacro22055 Vaccinium macrocarpon HOM05D006776 ORTHO05D007603 2.2e-31 139.8 87 70.1
MCO02G266 Micromonas commoda HOM05D006776 ORTHO05D007603 5.3e-30 135.2 201 39.3
AT1G19750 Arabidopsis thaliana HOM05D006776 ORTHO05D007603 3.0e-25 119.4 73 75.3
Cre01.g032139 Chlamydomonas reinhardtii HOM05D006776 ORTHO05D007603 2.5e-19 99.8 122 41.0
Os01g0857900 Oryza sativa ssp. japonica HOM05D006776 ORTHO05D007603 1.0e-17 94.4 51 94.1
AUR62037473 Chenopodium quinoa HOM05D006776 ORTHO05D007603 4.0e-17 92.4 51 84.3
PRCOL_00002749 Prasinoderma coloniale HOM05D006776 ORTHO05D007603 1.2e-16 90.9 234 31.2
MD08G1084000 Malus domestica HOM05D006776 ORTHO05D007603 1.8e-14 83.6 50 78.0
Carub.0001s2630 Capsella rubella HOM05D006776 ORTHO05D007603 2.3e-12 76.6 47 76.6
Solyc02g078970.4 Solanum lycopersicum HOM05D002303 ORTHO05D006504 7.0e-06 55.1 149 25.5


User provided reference genes

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