Gene: SGA_v2.0_scaffold152G36804

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold152G36804
  • Transcript Identifier SGA_v2.0_scaffold152T36804
  • Gene Type Coding gene
  • Location scaffold152 : 135413-149091 : negative

Gene Family Information

  • ID HOM05D006776
  • #Genes/#Species 119/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Transducin/WD40 repeat-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006369
IEA
InterProtermination of RNA polymerase II transcription
GO:0006378
IEA
InterPromRNA polyadenylation
GO:0006379
IEA
InterPromRNA cleavage
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G27840
GO:0006283
ISO
PLAZA Homology (enrichment)transcription-coupled nucleotide-excision repair HOM05D006776
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT1G27840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0000993
IEA
InterProRNA polymerase II complex binding
GO:0003729
IEA
InterPromRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G27840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR006569 CID domain
IPR045154 Protein PCF11-like
IPR008942 ENTH/VHS
IPR020472 G-protein beta WD-40 repeat
Mapman id Description
14.6.2.1 DNA damage response.nucleotide excision repair (NER).transcription-coupled nucleotide excision repair (TC-NER).DNA repair protein (CSA)
16.3.1.5.2 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor II (CF-IIm) complex.component Pcf11