Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 0.0e+00 2857.0 1460 100.0
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 0.0e+00 2284.6 1500 78.1
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 0.0e+00 2271.5 1497 76.9
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 0.0e+00 2261.9 1497 77.2
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 0.0e+00 2249.6 1536 75.7
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 0.0e+00 2243.8 1492 76.8
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2239.2 1496 76.7
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 0.0e+00 2232.2 1493 76.4
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2216.8 1479 76.7
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 0.0e+00 2211.4 1497 75.4
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 0.0e+00 2208.7 1497 75.6
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 0.0e+00 2208.7 1498 74.8
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 0.0e+00 2201.4 1500 74.5
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 0.0e+00 2185.2 1497 74.1
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 0.0e+00 2183.7 1500 74.5
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 0.0e+00 2181.4 1498 73.2
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 0.0e+00 2179.8 1498 74.4
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 0.0e+00 2176.4 1497 73.7
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 0.0e+00 2176.0 1498 73.7
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 0.0e+00 2165.6 1497 73.8
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 0.0e+00 2164.4 1498 73.7
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 0.0e+00 2163.7 1498 73.3
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 0.0e+00 2158.6 1497 73.5
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 0.0e+00 2158.3 1498 73.6
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 0.0e+00 2156.3 1554 72.3
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 0.0e+00 2149.4 1498 72.6
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 0.0e+00 2134.4 1498 73.1
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 0.0e+00 2129.0 1499 72.4
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 0.0e+00 2127.4 1535 71.0
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 0.0e+00 2126.7 1497 72.3
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 0.0e+00 2118.2 1498 72.4
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 0.0e+00 2117.4 1498 71.8
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 0.0e+00 2112.0 1569 70.4
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 0.0e+00 2106.6 1493 72.1
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 0.0e+00 2105.1 1497 71.7
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 0.0e+00 2104.3 1498 72.0
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 0.0e+00 2102.8 1499 71.8
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 0.0e+00 2102.0 1499 71.4
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2095.1 1497 70.7
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 0.0e+00 2092.8 1497 70.6
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 0.0e+00 2092.8 1499 71.4
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2092.0 1497 71.1
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 0.0e+00 2089.3 1497 71.3
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 0.0e+00 2088.9 1498 71.6
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 0.0e+00 2087.8 1499 71.3
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 0.0e+00 2087.0 1498 71.7
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2086.6 1497 70.6
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 0.0e+00 2083.1 1499 70.7
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 0.0e+00 2077.0 1497 70.9
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2076.6 1497 70.3
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2070.4 1492 70.5
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 0.0e+00 2067.4 1450 73.2
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 0.0e+00 2065.4 1498 70.2
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 0.0e+00 2056.2 1490 70.3
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 0.0e+00 2039.6 1500 70.1
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 0.0e+00 2022.3 1489 69.8
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 0.0e+00 2016.1 1488 69.3
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 0.0e+00 2015.0 1488 69.3
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 0.0e+00 2011.9 1498 69.5
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 0.0e+00 1998.8 1502 69.2
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 0.0e+00 1988.4 1493 68.3
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 0.0e+00 1983.4 1498 67.8
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 0.0e+00 1973.0 1498 68.1
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 0.0e+00 1967.6 1481 69.2
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 0.0e+00 1964.1 1490 67.7
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 0.0e+00 1964.1 1498 67.4
Dinv10475 Davidia involucrata HOM05D001486 ORTHO05D004921 0.0e+00 1962.2 1305 77.9
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 0.0e+00 1956.8 1499 67.2
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 0.0e+00 1954.9 1488 67.6
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 0.0e+00 1954.9 1556 66.1
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 0.0e+00 1952.6 1490 67.5
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 0.0e+00 1952.6 1488 68.1
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 0.0e+00 1947.9 1489 67.6
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 0.0e+00 1944.1 1488 67.6
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 0.0e+00 1942.5 1488 67.1
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 1939.9 1501 67.6
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 0.0e+00 1936.0 1491 67.2
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 0.0e+00 1935.6 1483 67.6
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 0.0e+00 1935.6 1494 67.0
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1934.8 1490 67.1
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1934.1 1490 67.0
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1932.9 1500 66.9
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 0.0e+00 1926.0 1500 66.6
Dinv07730 Davidia involucrata HOM05D001486 ORTHO05D004921 0.0e+00 1917.9 1276 76.6
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1916.4 1489 66.8
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 0.0e+00 1912.9 1500 66.3
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1912.5 1499 66.4
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 0.0e+00 1912.5 1500 66.3
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 0.0e+00 1911.7 1497 66.5
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1904.4 1496 66.2
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1900.9 1484 66.2
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 0.0e+00 1878.6 1577 63.3
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 0.0e+00 1870.5 1503 64.3
CAN.G601.2 Capsicum annuum HOM05D001486 ORTHO05D004921 0.0e+00 1862.0 1304 74.2
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 0.0e+00 1860.5 1464 66.1
Gohir.A03G115400 Gossypium hirsutum HOM05D001486 ORTHO05D004921 0.0e+00 1834.3 1309 72.7
CiPaw.06G051900 Carya illinoinensis HOM05D001486 ORTHO05D004921 0.0e+00 1813.9 1307 72.9
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 0.0e+00 1800.0 1596 61.7
Hma1.2p1_0277F.1_g111740 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 0.0e+00 1799.3 1392 69.3
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 0.0e+00 1790.8 1482 62.1
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 0.0e+00 1781.1 1492 62.1
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 0.0e+00 1758.0 1445 64.8
Hma1.2p1_0705F.1_g206910 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 0.0e+00 1753.8 1224 73.8
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 0.0e+00 1723.0 1688 56.7
A06p10890 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1703.7 1370 65.3
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 0.0e+00 1692.2 1446 60.9
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 0.0e+00 1522.7 1525 53.6
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 0.0e+00 1513.4 1517 53.5
TAR629G0611 Trochodendron aralioides HOM05D001486 ORTHO05D004921 0.0e+00 1501.1 988 75.7
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 0.0e+00 1423.3 1423 57.1
Nitab4.5_0004576g0040 Nicotiana tabacum HOM05D001486 ORTHO05D004921 0.0e+00 1343.2 1374 55.9
Lj1g0014898 Lotus japonicus HOM05D001486 ORTHO05D004921 0.0e+00 1323.5 1087 65.3
Zm00001eb399840 Zea mays HOM05D001486 ORTHO05D004921 0.0e+00 1315.4 1221 57.2
Nitab4.5_0010421g0010 Nicotiana tabacum HOM05D001486 ORTHO05D004921 0.0e+00 1283.5 1376 54.2
AagrBONN_evm.TU.Sc2ySwM_362.1455 Anthoceros agrestis HOM05D001486 ORTHO05D004921 0.0e+00 1263.8 1298 52.7
Peaxi162Scf01152g00010 Petunia axillaris HOM05D001486 ORTHO05D004921 0.0e+00 1105.1 1122 56.7
GSVIVG01011662001 Vitis vinifera HOM05D001486 ORTHO05D004921 2.7e-299 1032.7 700 76.4
MD16G1018500 Malus domestica HOM05D001486 ORTHO05D004921 1.3e-293 1013.8 751 68.2
SEGI_07920 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 8.7e-282 974.5 848 59.8
Peaxi162Scf00047g00710 Petunia axillaris HOM05D001486 ORTHO05D004921 1.2e-259 901.0 768 62.9
unitig_27.g25159 Utricularia gibba HOM05D001486 ORTHO05D004921 2.6e-254 883.2 701 66.5
CDE06G1861 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 5.9e-238 828.9 579 69.1
Peaxi162Scf01152g00113 Petunia axillaris HOM05D001486 ORTHO05D004921 6.1e-227 792.3 926 52.1
unitig_27.g25160 Utricularia gibba HOM05D001486 ORTHO05D004921 2.7e-214 750.4 613 64.3
CDE06G1153 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 3.9e-197 693.3 598 62.7
GSVIVG01011661001 Vitis vinifera HOM05D001486 ORTHO05D004921 2.1e-182 644.4 368 81.5
Carub.0127s0003 Capsella rubella HOM05D001486 ORTHO05D004921 7.3e-180 636.0 882 43.5
TAR629G0795 Trochodendron aralioides HOM05D001486 ORTHO05D004921 3.1e-162 577.4 442 71.9
ECA247G0951 Erigeron canadensis HOM05D001486 ORTHO05D004921 1.4e-151 542.0 709 45.4
AL1G32070 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 1.5e-148 531.9 475 59.6
MD16G1018600 Malus domestica HOM05D001486 ORTHO05D004921 5.9e-145 520.0 462 61.9
RcHm_v2.0_Chr2g0167011 Rosa chinensis HOM05D001486 ORTHO05D004921 1.8e-130 471.9 555 50.8
CDE07G1854 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 2.3e-104 385.2 751 37.0
MCO15G435 Micromonas commoda HOM05D001486 ORTHO05D004921 1.5e-103 382.5 1741 25.4
CDE07G0203 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 1.8e-101 375.6 445 47.2
PRCOL_00002396 Prasinoderma coloniale HOM05D001486 ORTHO05D004921 1.5e-95 355.9 1529 26.4
MD16G1018800 Malus domestica HOM05D001486 ORTHO05D004921 2.0e-92 345.5 218 81.2
SEGI_12334 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 2.1e-86 325.5 335 55.2
Cre09.g394350 Chlamydomonas reinhardtii HOM05D001486 ORTHO05D004921 6.2e-86 323.9 1607 24.8
SEGI_06977 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 2.5e-79 302.0 224 67.9
AL1G32080 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 8.7e-72 276.9 230 62.6
vmacro04889 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 1.2e-70 273.1 241 61.8
Zm00001eb255180 Zea mays HOM05D001486 ORTHO05D004921 3.4e-68 265.0 195 68.7
vmacro09906 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 1.3e-67 263.1 273 56.4
CAN.G601.1 Capsicum annuum HOM05D001486 ORTHO05D004921 9.3e-66 256.9 165 72.1
FvH4_1g18130 Fragaria vesca HOM05D001486 ORTHO05D004921 2.7e-65 255.4 155 72.3
Cfa024881 Carpinus fangiana HOM05D005623 ORTHO05D007130 5.8e-52 211.1 1308 23.3
SGA_v2.0_scaffold23G10209 Striga asiatica HOM05D001486 ORTHO05D004921 2.6e-44 185.7 102 84.3
CSS0012816 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 9.3e-42 177.2 189 52.9
RcHm_v2.0_Chr2g0167021 Rosa chinensis HOM05D001486 ORTHO05D004921 1.5e-39 169.9 223 51.1
Pp3c3_36410 Physcomitrium patens HOM05D001486 ORTHO05D004921 4.8e-38 164.9 155 54.2
CARHR227050 Cardamine hirsuta HOM05D001486 ORTHO05D004921 4.5e-36 158.3 159 50.9
AL2G18360 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 5.0e-35 154.8 307 39.1
Zm00001eb235300 Zea mays HOM05D001486 ORTHO05D004921 1.2e-33 150.2 129 55.0
Zm00001eb201400 Zea mays HOM05D001486 ORTHO05D004921 2.3e-32 146.0 121 62.8
BcaC09g49263 Brassica carinata HOM05D001486 ORTHO05D012131 4.7e-25 121.7 96 62.5
Rhsim12G0118300 Rhododendron simsii HOM05D001486 ORTHO05D004921 7.9e-25 120.9 101 66.3
BcaC01g04114 Brassica carinata HOM05D001486 ORTHO05D012131 1.0e-24 120.6 96 62.5
ClCG01G015310 Citrullus lanatus HOM05D001486 ORTHO05D004921 3.9e-24 118.6 56 91.1
SEGI_12550 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 8.2e-22 110.9 58 82.8
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 1.5e-20 106.7 66 75.8
AL3G34910 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 1.5e-15 90.1 153 38.6
GSVIVG01026805001 Vitis vinifera HOM05D001486 ORTHO05D004921 9.7e-15 87.4 73 58.9
Hma1.2p1_0277F.1_g111730 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 1.6e-12 80.1 53 67.9
Hma1.2p1_0705F.1_g206905 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 1.6e-12 80.1 53 67.9
SMO306G0002 Selaginella moellendorffii HOM05D065592 ORTHO05D004921 1.6e-12 80.1 555 23.1
CSS0014875 Camellia sinensis var. sinensis HOM05D014252 ORTHO05D004921 2.0e-07 63.2 40 77.5
Zm00001eb334690 Zea mays HOM05D001486 ORTHO05D037216 4.4e-07 62.0 54 57.4
FvH4_4g10520 Fragaria vesca HOM05D002057 ORTHO05D004921 1.7e-06 60.1 34 73.5
GSVIVG01001572001 Vitis vinifera HOM05D001486 ORTHO05D004921 8.2e-06 57.8 52 61.5


User provided reference genes

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