Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059999.1 Olea europaea HOM05D004151 ORTHO05D004775 1.1e-118 430.3 251 100.0
Cc06_g22960 Coffea canephora HOM05D004151 ORTHO05D004775 3.2e-59 232.6 182 80.8
Oeu049600.1 Olea europaea HOM05D004151 ORTHO05D004775 3.2e-59 232.6 195 82.1
Dinv37014 Davidia involucrata HOM05D004151 ORTHO05D004775 1.4e-57 227.3 176 82.4
Peaxi162Scf00003g04832 Petunia axillaris HOM05D004151 ORTHO05D004775 3.0e-57 226.1 150 79.3
PGSC0003DMG400008366 Solanum tuberosum HOM05D004151 ORTHO05D004775 1.1e-56 224.2 150 83.3
Solyc10g078540.3 Solanum lycopersicum HOM05D004151 ORTHO05D004775 1.5e-56 223.8 150 83.3
Sopen10g029190 Solanum pennellii HOM05D004151 ORTHO05D004775 1.5e-56 223.8 150 83.3
Nitab4.5_0009048g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 3.3e-56 222.6 172 81.4
Dinv14579 Davidia involucrata HOM05D004151 ORTHO05D004775 5.7e-56 221.9 184 80.4
Atru.chr5.2062 Acer truncatum HOM05D004151 ORTHO05D004775 6.3e-55 218.4 182 70.3
Nitab4.5_0007542g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.8e-54 216.9 148 79.1
Sed0025621 Sechium edule HOM05D004151 ORTHO05D004775 6.9e-54 214.9 172 70.9
Atru.chr5.2060 Acer truncatum HOM05D004151 ORTHO05D004775 9.1e-54 214.5 182 69.8
TWI32G1207 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 1.2e-53 214.2 181 72.4
TAR369G0512 Trochodendron aralioides HOM05D004151 ORTHO05D004775 1.2e-53 214.2 184 76.6
CsaV3_4G013280 Cucumis sativus L. HOM05D004151 ORTHO05D004775 1.5e-53 213.8 168 79.2
MSTRG.19934 Avicennia marina HOM05D004151 ORTHO05D004775 2.6e-53 213.0 175 77.7
THA.LOC104827273 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 3.4e-53 212.6 172 79.1
Thecc.05G294500 Theobroma cacao HOM05D004151 ORTHO05D004775 5.9e-53 211.8 176 75.6
unitig_21.g20195 Utricularia gibba HOM05D004151 ORTHO05D004775 1.0e-52 211.1 148 81.8
Cfa016441 Carpinus fangiana HOM05D004151 ORTHO05D004775 1.3e-52 210.7 178 74.2
Duzib106G1401 Durio zibethinus HOM05D004151 ORTHO05D004775 1.7e-52 210.3 176 74.4
Thhalv10014755m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 1.7e-52 210.3 146 77.4
SalBow5G4201 Salvia bowleyana HOM05D004151 ORTHO05D004775 1.7e-52 210.3 142 83.1
GSVIVG01033401001 Vitis vinifera HOM05D004151 ORTHO05D004775 2.9e-52 209.5 173 73.4
Manes.09G141400 Manihot esculenta HOM05D004151 ORTHO05D004775 3.8e-52 209.1 172 75.6
Duzib177G0709 Durio zibethinus HOM05D004151 ORTHO05D004775 1.1e-51 207.6 178 75.3
SGA_v2.0_scaffold274G46513 Striga asiatica HOM05D004151 ORTHO05D004775 1.1e-51 207.6 175 64.0
Aa31LG5G14500 Aethionema arabicum HOM05D004151 ORTHO05D004775 1.9e-51 206.8 134 84.3
Aqoxy1G00486 Aquilegia oxysepala HOM05D004151 ORTHO05D004775 2.5e-51 206.5 178 78.1
Manes.08G144000 Manihot esculenta HOM05D004151 ORTHO05D004775 2.5e-51 206.5 174 74.1
Lj1g0021266 Lotus japonicus HOM05D004151 ORTHO05D004775 3.2e-51 206.1 181 75.1
CANSAT78G0749 Cannabis sativa HOM05D004151 ORTHO05D004775 4.2e-51 205.7 188 68.1
MELO3C008801.2 Cucumis melo HOM05D004151 ORTHO05D004775 5.5e-51 205.3 175 76.0
QL07p019530 Quercus lobata HOM05D004151 ORTHO05D004775 5.5e-51 205.3 152 79.6
CDE06G0359 Ceratophyllum demersum HOM05D004151 ORTHO05D004775 9.4e-51 204.5 172 74.4
Lalb_Chr14g0364491 Lupinus albus HOM05D004151 ORTHO05D004775 9.4e-51 204.5 177 74.0
HPP92_021240 Vanilla planifolia HOM05D004151 ORTHO05D004775 9.4e-51 204.5 150 78.7
Ah.06g191800 Amaranthus hybridus HOM05D004151 ORTHO05D004775 1.2e-50 204.1 174 72.4
Glyma.16G041400 Glycine max HOM05D004151 ORTHO05D004775 1.2e-50 204.1 185 68.1
Nn7g35851 Nelumbo nucifera HOM05D004151 ORTHO05D004775 1.2e-50 204.1 145 77.9
Sabra13G0051900 Salix brachista HOM05D004151 ORTHO05D004775 1.2e-50 204.1 191 66.5
ClCG04G005310 Citrullus lanatus HOM05D004151 ORTHO05D004775 1.6e-50 203.8 183 73.2
Migut.J01888 Erythranthe guttata HOM05D004151 ORTHO05D004775 1.6e-50 203.8 152 77.0
Haze_19418 Corylus avellana HOM05D004151 ORTHO05D004775 2.1e-50 203.4 154 78.6
Haze_19447 Corylus avellana HOM05D004151 ORTHO05D004775 2.1e-50 203.4 154 78.6
CARHR194880 Cardamine hirsuta HOM05D004151 ORTHO05D004775 3.6e-50 202.6 178 69.7
vmacro09141 Vaccinium macrocarpon HOM05D004151 ORTHO05D004775 6.1e-50 201.8 160 73.8
Gohir.A08G213200 Gossypium hirsutum HOM05D004151 ORTHO05D004775 1.0e-49 201.1 172 76.2
Os11g0579800 Oryza sativa ssp. japonica HOM05D004151 ORTHO05D004775 1.0e-49 201.1 186 69.4
Gohir.D08G230300 Gossypium hirsutum HOM05D004151 ORTHO05D004775 1.4e-49 200.7 171 76.6
Gorai.004G244500 Gossypium raimondii HOM05D004151 ORTHO05D004775 1.4e-49 200.7 171 76.6
RcHm_v2.0_Chr3g0490211 Rosa chinensis HOM05D004151 ORTHO05D004775 1.4e-49 200.7 173 69.4
SEGI_32651 Sequoiadendron giganteum HOM05D004151 ORTHO05D004775 1.4e-49 200.7 156 71.2
BcaNung05743 Brassica carinata HOM05D004151 ORTHO05D004775 1.8e-49 200.3 161 70.2
BraA01t04550Z Brassica rapa HOM05D004151 ORTHO05D004775 1.8e-49 200.3 161 68.3
Hma1.2p1_0134F.1_g061640 Hydrangea macrophylla HOM05D004151 ORTHO05D004775 1.8e-49 200.3 155 74.8
Lalb_Chr22g0359191 Lupinus albus HOM05D004151 ORTHO05D004775 1.8e-49 200.3 177 74.6
TWI34G0161 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 1.8e-49 200.3 165 70.3
PGR142G1491 Punica granatum HOM05D004151 ORTHO05D004775 2.3e-49 199.9 173 76.3
TPR.G5895 Trifolium pratense HOM05D004151 ORTHO05D004775 2.3e-49 199.9 179 72.6
FAN19G1796 Fragaria x ananassa HOM05D004151 ORTHO05D004775 3.0e-49 199.5 166 70.5
FAN26G2823 Fragaria x ananassa HOM05D004151 ORTHO05D004775 3.0e-49 199.5 166 70.5
Medtr7g085640 Medicago truncatula HOM05D004151 ORTHO05D004775 3.0e-49 199.5 185 71.9
Sed0023399 Sechium edule HOM05D004151 ORTHO05D004775 3.0e-49 199.5 153 74.5
Psat0s1971g0280 Pisum sativum HOM05D004151 ORTHO05D004775 3.9e-49 199.1 181 75.1
Potri.019G034900 Populus trichocarpa HOM05D004151 ORTHO05D004775 3.9e-49 199.1 161 72.0
THA.LOC104802867 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 3.9e-49 199.1 176 75.6
CSS0045523 Camellia sinensis var. sinensis HOM05D004151 ORTHO05D004775 5.1e-49 198.7 182 72.5
HanXRQChr08g0216931 Helianthus annuus HOM05D004151 ORTHO05D004775 5.1e-49 198.7 182 73.6
Sc25g0004980 Simmondsia chinensis HOM05D004151 ORTHO05D004775 5.1e-49 198.7 173 71.1
Potri.013G058400 Populus trichocarpa HOM05D004151 ORTHO05D004775 6.7e-49 198.4 165 72.1
FvH4_1g30320 Fragaria vesca HOM05D004151 ORTHO05D004775 8.8e-49 198.0 166 71.1
BcaC03g13582 Brassica carinata HOM05D004151 ORTHO05D004775 1.1e-48 197.6 173 68.2
BolC2t06882H Brassica oleracea HOM05D004151 ORTHO05D004775 1.1e-48 197.6 173 68.2
BolC1t05799H Brassica oleracea HOM05D004151 ORTHO05D004775 1.5e-48 197.2 186 65.6
FAN23G0170 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.5e-48 197.2 166 69.9
Gohir.A11G296500 Gossypium hirsutum HOM05D004151 ORTHO05D004775 2.0e-48 196.8 142 77.5
Gohir.D11G310400 Gossypium hirsutum HOM05D004151 ORTHO05D004775 2.0e-48 196.8 142 77.5
Gorai.007G343400 Gossypium raimondii HOM05D004151 ORTHO05D004775 2.0e-48 196.8 142 77.5
MD05G1045500 Malus domestica HOM05D004151 ORTHO05D004775 2.0e-48 196.8 158 67.1
Phvul.001G110400 Phaseolus vulgaris HOM05D004151 ORTHO05D004775 2.0e-48 196.8 156 73.7
Hund24835 Selenicereus undatus HOM05D004151 ORTHO05D004775 2.0e-48 196.8 176 72.7
A03p08690 Brassica napus HOM05D004151 ORTHO05D004775 3.3e-48 196.1 198 58.6
MD00G1189600 Malus domestica HOM05D004151 ORTHO05D004775 3.3e-48 196.1 160 66.2
Ah.13g075350 Amaranthus hybridus HOM05D004151 ORTHO05D004775 4.4e-48 195.7 154 74.0
CARHR078040 Cardamine hirsuta HOM05D004151 ORTHO05D004775 4.4e-48 195.7 173 64.2
FAN28G2413 Fragaria x ananassa HOM05D004151 ORTHO05D004775 4.4e-48 195.7 138 81.2
CiPaw.09G001900 Carya illinoinensis HOM05D004151 ORTHO05D004775 5.7e-48 195.3 172 72.1
Peaxi162Scf00076g01048 Petunia axillaris HOM05D004151 ORTHO05D004775 5.7e-48 195.3 150 77.3
Sp6g26140 Schrenkiella parvula HOM05D004151 ORTHO05D004775 5.7e-48 195.3 149 75.2
A01p41270 Brassica napus HOM05D004151 ORTHO05D004775 7.4e-48 194.9 161 67.1
BNapus_Darmor_BZH_scaffold_78p00440 Brassica napus HOM05D004151 ORTHO05D004775 7.4e-48 194.9 161 67.1
Actinidia22083 Actinidia chinensis HOM05D004151 ORTHO05D004775 9.7e-48 194.5 174 73.6
AT3G03920 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 9.7e-48 194.5 186 67.2
Lsat_1_v5_gn_8_24760 Lactuca sativa HOM05D004151 ORTHO05D004775 9.7e-48 194.5 179 75.4
Prupe.8G064800 Prunus persica HOM05D004151 ORTHO05D004775 9.7e-48 194.5 178 74.2
VMungo1383G2477 Vigna mungo HOM05D004151 ORTHO05D004775 1.3e-47 194.1 147 74.1
Aa31LG11G11430 Aethionema arabicum HOM05D004151 ORTHO05D004775 1.7e-47 193.7 171 74.9
arahy.Tifrunner.gnm1.ann1.JDMG7B Arachis hypogaea HOM05D004151 ORTHO05D004775 2.2e-47 193.4 167 74.9
arahy.Tifrunner.gnm1.ann1.PLSY77 Arachis hypogaea HOM05D004151 ORTHO05D004775 2.2e-47 193.4 167 74.9
C02p09730 Brassica napus HOM05D004151 ORTHO05D004775 2.2e-47 193.4 173 67.1
Glyma.19G110900 Glycine max HOM05D004151 ORTHO05D004775 2.2e-47 193.4 187 69.0
Rhsim04G0087500 Rhododendron simsii HOM05D004151 ORTHO05D004775 2.2e-47 193.4 151 75.5
PSO063G0165 Papaver somniferum HOM05D004151 ORTHO05D004775 2.8e-47 193.0 153 73.9
Zm00001eb200450 Zea mays HOM05D004151 ORTHO05D004775 2.8e-47 193.0 145 73.8
BolC3t13499H Brassica oleracea HOM05D004151 ORTHO05D004775 4.8e-47 192.2 189 61.9
Carub.0003s0316 Capsella rubella HOM05D004151 ORTHO05D004775 4.8e-47 192.2 162 66.0
ECA233G5487 Erigeron canadensis HOM05D004151 ORTHO05D004775 4.8e-47 192.2 183 66.7
Pp3c5_28430 Physcomitrium patens HOM05D004151 ORTHO05D004775 8.2e-47 191.4 147 70.7
AT5G18180 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 1.1e-46 191.0 147 74.1
BcaNung05745 Brassica carinata HOM05D004151 ORTHO05D004775 1.1e-46 191.0 178 66.3
AL3G13810 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 1.4e-46 190.7 181 72.9
COL.COLO4_13597 Corchorus olitorius HOM05D004151 ORTHO05D004775 1.4e-46 190.7 147 72.8
HanXRQChr07g0204461 Helianthus annuus HOM05D004151 ORTHO05D004775 1.4e-46 190.7 177 75.1
PSO782G4796 Papaver somniferum HOM05D004151 ORTHO05D004775 1.4e-46 190.7 153 73.9
Thhalv10021561m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 1.8e-46 190.3 152 73.0
A02p04770 Brassica napus HOM05D004151 ORTHO05D004775 3.1e-46 189.5 169 69.2
BcaB01g05179 Brassica carinata HOM05D004151 ORTHO05D004775 4.1e-46 189.1 189 61.4
C03p10140 Brassica napus HOM05D004151 ORTHO05D004775 4.1e-46 189.1 189 61.4
BraA03t10192Z Brassica rapa HOM05D004151 ORTHO05D004775 4.1e-46 189.1 189 61.4
PSO384G0229 Papaver somniferum HOM05D004151 ORTHO05D004775 4.1e-46 189.1 148 75.7
Sp3g02890 Schrenkiella parvula HOM05D004151 ORTHO05D004775 4.1e-46 189.1 155 70.3
Lsat_1_v5_gn_8_145841 Lactuca sativa HOM05D004151 ORTHO05D004775 5.3e-46 188.7 180 73.3
AL6G29380 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 1.6e-45 187.2 147 70.7
EL10Ac3g06820 Beta vulgaris HOM05D004151 ORTHO05D004775 1.6e-45 187.2 154 72.1
Carub.0006s1646 Capsella rubella HOM05D004151 ORTHO05D004775 2.0e-45 186.8 151 70.9
Zm00001eb114360 Zea mays HOM05D004151 ORTHO05D004775 7.7e-45 184.9 203 62.6
ATR0697G007 Amborella trichopoda HOM05D004151 ORTHO05D004775 1.0e-44 184.5 140 75.0
AUR62032690 Chenopodium quinoa HOM05D004151 ORTHO05D004775 1.0e-44 184.5 151 70.9
BraA02t05436Z Brassica rapa HOM05D004151 ORTHO05D004775 1.3e-44 184.1 189 57.1
PSO339G5713 Papaver somniferum HOM05D004151 ORTHO05D004775 1.3e-44 184.1 171 72.5
Pp3c25_15020 Physcomitrium patens HOM05D004151 ORTHO05D004775 1.7e-44 183.7 147 68.7
Sabra19G0042500 Salix brachista HOM05D004151 ORTHO05D004775 8.5e-44 181.4 144 73.6
Sabra19G0044800 Salix brachista HOM05D004151 ORTHO05D004775 8.5e-44 181.4 144 73.6
CBR_g48747 Chara braunii HOM05D004151 ORTHO05D004775 1.9e-43 180.3 158 67.7
Mapoly0086s0024 Marchantia polymorpha HOM05D004151 ORTHO05D004775 3.2e-43 179.5 146 70.5
Cpa.g.sc51.114 Carica papaya HOM05D004151 ORTHO05D004775 4.2e-43 179.1 91 91.2
Nitab4.5_0002769g0090 Nicotiana tabacum HOM05D004151 ORTHO05D004775 9.4e-43 177.9 151 72.2
BcaB05g23300 Brassica carinata HOM05D004151 ORTHO05D004775 1.2e-42 177.6 150 70.0
AagrBONN_evm.TU.Sc2ySwM_362.2901 Anthoceros agrestis HOM05D004151 ORTHO05D004775 2.1e-42 176.8 155 63.9
COL.COLO4_13598 Corchorus olitorius HOM05D004151 ORTHO05D004775 4.0e-41 172.6 153 67.3
Ca_08267_v3 Cicer arietinum L. HOM05D004151 ORTHO05D004775 5.2e-41 172.2 90 88.9
CAN.G960.49 Capsicum annuum HOM05D004151 ORTHO05D004775 1.1e-40 171.0 95 86.3
Nitab4.5_0004844g0050 Nicotiana tabacum HOM05D004151 ORTHO05D004775 2.6e-40 169.9 89 88.8
Hund19236 Selenicereus undatus HOM05D004151 ORTHO05D004775 1.3e-39 167.5 117 70.1
Cre13.g567850 Chlamydomonas reinhardtii HOM05D004151 ORTHO05D004775 2.2e-39 166.8 177 59.9
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 1.1e-35 154.5 98 78.6
MCO13G219 Micromonas commoda HOM05D004151 ORTHO05D004775 6.1e-34 148.7 127 64.6
BolC2t11912H Brassica oleracea HOM05D004151 ORTHO05D004775 3.1e-30 136.3 132 57.6
SMO347G0554 Selaginella moellendorffii HOM05D004151 ORTHO05D004775 4.1e-30 136.0 148 58.8
C09p58800 Brassica napus HOM05D004151 ORTHO05D004775 2.2e-28 130.2 80 71.2
PRCOL_00005119 Prasinoderma coloniale HOM05D005848 ORTHO05D007532 5.5e-27 125.6 76 68.4
BraA10t42874Z Brassica rapa HOM05D004151 ORTHO05D004775 9.4e-27 124.8 105 63.8
unitig_744.g24550 Utricularia gibba HOM05D004151 ORTHO05D004775 1.0e-25 121.3 89 71.9
Actinidia30553 Actinidia chinensis HOM05D004151 ORTHO05D004775 2.2e-23 113.6 89 79.8
HanXRQChr05g0143841 Helianthus annuus HOM05D004151 ORTHO05D004775 3.1e-22 109.8 167 51.5
Oeu035720.1 Olea europaea HOM05D004151 ORTHO05D004775 3.1e-22 109.8 100 62.0
Haze_27090 Corylus avellana HOM05D000590 ORTHO05D004775 7.0e-22 108.6 94 52.1
Oeu035726.1 Olea europaea HOM05D004151 ORTHO05D004775 1.2e-21 107.8 173 46.8
C02p58510 Brassica napus HOM05D004151 ORTHO05D004775 1.6e-21 107.5 98 57.1
Oeu063218.1 Olea europaea HOM05D000447 ORTHO05D000315 1.7e-20 104.0 50 90.0
Oeu058164.1 Olea europaea HOM05D000447 ORTHO05D289649 2.9e-20 103.2 51 92.2
Oeu008871.1 Olea europaea HOM05D000447 ORTHO05D291543 7.3e-19 98.6 51 82.4
Oeu009476.1 Olea europaea HOM05D001871 ORTHO05D002022 1.2e-18 97.8 51 86.3
Oeu051884.1 Olea europaea HOM05D000779 ORTHO05D000246 1.2e-18 97.8 50 88.0
Zm00001eb274230 Zea mays HOM05D004151 ORTHO05D004775 2.3e-17 93.6 49 81.6
Oeu006212.1 Olea europaea HOM05D000300 ORTHO05D000383 8.9e-17 91.7 58 70.7
Oeu018065.1 Olea europaea HOM05D000447 ORTHO05D288774 1.5e-16 90.9 48 87.5
Oeu057825.1 Olea europaea HOM05D000201 ORTHO05D001515 1.9e-11 73.9 38 84.2
Atru.chr10.1764 Acer truncatum HOM05D004151 ORTHO05D004775 7.3e-11 72.0 75 57.3
Atru.chr5.2304 Acer truncatum HOM05D004151 ORTHO05D004775 7.3e-11 72.0 75 57.3
Atru.chr6.7 Acer truncatum HOM05D004151 ORTHO05D004775 1.2e-10 71.2 75 56.0
BcaB08g36698 Brassica carinata HOM05D004151 ORTHO05D004775 2.1e-10 70.5 46 76.1
Oeu036181.1 Olea europaea HOM05D013212 ORTHO05D292653 2.1e-10 70.5 48 70.8
Atru.chr13.534 Acer truncatum HOM05D004151 ORTHO05D004775 6.2e-10 68.9 75 56.0
Atru.chr2.3197 Acer truncatum HOM05D004151 ORTHO05D004775 6.2e-10 68.9 75 56.0
Atru.chr4.2011 Acer truncatum HOM05D004151 ORTHO05D004775 6.2e-10 68.9 75 56.0
Oeu039525.4 Olea europaea HOM05D000001 ORTHO05D000003 5.2e-09 65.9 44 68.2
Oeu011414.1 Olea europaea HOM05D006441 ORTHO05D008203 3.4e-08 63.2 29 93.1
Oeu029146.1 Olea europaea HOM05D000396 ORTHO05D000116 7.5e-08 62.0 43 67.4
Oeu002042.1 Olea europaea HOM05D001666 ORTHO05D291326 3.7e-07 59.7 31 80.6
BolC9t58722H Brassica oleracea HOM05D004151 ORTHO05D004775 4.9e-07 59.3 149 40.3
Oeu007667.1 Olea europaea HOM05D013212 ORTHO05D007954 6.4e-07 58.9 30 86.7
ECA246G0128 Erigeron canadensis HOM05D001659 ORTHO05D001659 1.1e-06 58.2 35 71.4
Oeu011616.1 Olea europaea HOM05D000447 ORTHO05D289873 4.1e-06 56.2 29 89.7


User provided reference genes

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