Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051224.2 Olea europaea HOM05D006350 ORTHO05D007850 0.0e+00 1207.6 585 100.0
Nitab4.5_0000091g0460 Nicotiana tabacum HOM05D006350 ORTHO05D007850 1.2e-165 587.4 690 48.6
Nitab4.5_0002613g0020 Nicotiana tabacum HOM05D006350 ORTHO05D007850 8.6e-164 581.3 695 48.5
SGA_v2.0_scaffold114G32022 Striga asiatica HOM05D006350 ORTHO05D007850 1.8e-161 573.5 692 48.4
MSTRG.15966 Avicennia marina HOM05D006350 ORTHO05D007850 4.0e-161 572.4 683 48.3
CAN.G404.6 Capsicum annuum HOM05D006350 ORTHO05D007850 4.0e-161 572.4 690 47.1
CSS0026996 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 3.4e-160 569.3 694 47.1
Ciclev10014587m.g Citrus clementina HOM05D006350 ORTHO05D007850 3.4e-160 569.3 670 49.0
Rhsim02G0112000 Rhododendron simsii HOM05D006350 ORTHO05D007850 3.4e-160 569.3 695 47.8
Peaxi162Scf00521g00815 Petunia axillaris HOM05D006350 ORTHO05D007850 2.2e-159 566.6 688 48.3
CSS0007285 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 4.9e-159 565.5 694 47.0
GSVIVG01012630001 Vitis vinifera HOM05D006350 ORTHO05D007850 1.3e-156 557.4 713 46.1
Sopen03g005680 Solanum pennellii HOM05D006350 ORTHO05D007850 2.3e-156 556.6 638 49.2
Migut.M01281 Erythranthe guttata HOM05D006350 ORTHO05D007850 2.1e-154 550.1 688 47.2
Solyc03g031820.4 Solanum lycopersicum HOM05D006350 ORTHO05D007850 6.2e-154 548.5 646 48.8
CiPaw.09G087000 Carya illinoinensis HOM05D006350 ORTHO05D007850 2.3e-153 546.6 699 46.5
vmacro15831 Vaccinium macrocarpon HOM05D006350 ORTHO05D007850 2.3e-153 546.6 799 43.1
QL93p0073_0722 Quercus lobata HOM05D006350 ORTHO05D007850 4.4e-152 542.3 710 46.1
DCAR_008125 Daucus carota HOM05D006350 ORTHO05D007850 3.7e-151 539.3 707 45.0
QL05p075148 Quercus lobata HOM05D006350 ORTHO05D007850 8.3e-151 538.1 710 45.8
MD10G1314700 Malus domestica HOM05D006350 ORTHO05D007850 1.9e-150 537.0 705 46.4
ECA248G2377 Erigeron canadensis HOM05D006350 ORTHO05D007850 1.6e-149 533.9 682 45.6
Eucgr.D00813 Eucalyptus grandis HOM05D006350 ORTHO05D007850 7.8e-149 531.6 683 47.0
Gohir.D10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 1.3e-148 530.8 682 47.2
HanXRQChr16g0504561 Helianthus annuus HOM05D006350 ORTHO05D007850 1.3e-148 530.8 685 45.8
TAR629G2651 Trochodendron aralioides HOM05D006350 ORTHO05D007850 1.7e-148 530.4 712 44.5
COL.COLO4_31726 Corchorus olitorius HOM05D006350 ORTHO05D007850 3.0e-148 529.6 679 47.3
CANSAT80G1390 Cannabis sativa HOM05D006350 ORTHO05D007850 5.1e-148 528.9 703 45.4
Manes.17G035000 Manihot esculenta HOM05D006350 ORTHO05D007850 5.1e-148 528.9 694 46.0
Gorai.011G016800 Gossypium raimondii HOM05D006350 ORTHO05D007850 1.1e-147 527.7 687 47.0
RcHm_v2.0_Chr5g0003961 Rosa chinensis HOM05D006350 ORTHO05D007850 1.5e-147 527.3 691 46.3
THA.LOC104821036 Tarenaya hassleriana HOM05D006350 ORTHO05D007850 3.3e-147 526.2 675 46.1
Gohir.A10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 9.5e-147 524.6 683 47.1
FAN21G3377 Fragaria x ananassa HOM05D006350 ORTHO05D007850 2.1e-146 523.5 672 46.4
ClCG01G022180 Citrullus lanatus HOM05D006350 ORTHO05D007850 3.6e-146 522.7 675 46.4
Thecc.06G214100 Theobroma cacao HOM05D006350 ORTHO05D007850 1.4e-145 520.8 683 46.7
Dinv20017 Davidia involucrata HOM05D006350 ORTHO05D007850 1.8e-145 520.4 661 47.4
Lj1A1225T76 Lonicera japonica HOM05D006350 ORTHO05D007850 2.4e-145 520.0 634 48.3
PGR004G2689 Punica granatum HOM05D006350 ORTHO05D007850 2.4e-145 520.0 690 45.7
TWI63G1388 Tripterygium wilfordii HOM05D006350 ORTHO05D007850 4.0e-145 519.2 685 45.7
FvH4_3g02650 Fragaria vesca HOM05D006350 ORTHO05D007850 1.5e-144 517.3 678 46.0
Glyma.04G064300 Glycine max HOM05D006350 ORTHO05D007850 1.5e-144 517.3 675 45.6
Ca_07431_v3 Cicer arietinum L. HOM05D006350 ORTHO05D007850 5.8e-144 515.4 666 46.5
Potri.004G022500 Populus trichocarpa HOM05D006350 ORTHO05D007850 2.9e-143 513.1 684 46.5
Prupe.4G026100 Prunus persica HOM05D006350 ORTHO05D007850 2.9e-143 513.1 710 44.1
Medtr7g050860 Medicago truncatula HOM05D006350 ORTHO05D007850 4.9e-143 512.3 660 46.5
Duzib160G0024 Durio zibethinus HOM05D006350 ORTHO05D007850 1.1e-142 511.1 613 49.1
AUR62012643 Chenopodium quinoa HOM05D006350 ORTHO05D007850 2.4e-142 510.0 708 43.6
BcaB01g05074 Brassica carinata HOM05D006350 ORTHO05D007850 2.1e-141 506.9 635 45.4
PSO541G3631 Papaver somniferum HOM05D006350 ORTHO05D007850 2.1e-141 506.9 702 43.6
PSO675G5568 Papaver somniferum HOM05D006350 ORTHO05D007850 2.7e-141 506.5 702 43.0
Aa31LG11G14390 Aethionema arabicum HOM05D006350 ORTHO05D007850 2.3e-140 503.4 649 45.5
Phvul.002G048900 Phaseolus vulgaris HOM05D006350 ORTHO05D007850 3.9e-140 502.7 678 45.0
BolC3t13297H Brassica oleracea HOM05D006350 ORTHO05D007850 1.1e-139 501.1 651 44.7
VMungo1215G2459 Vigna mungo HOM05D006350 ORTHO05D007850 1.9e-139 500.4 679 45.5
C03p08000 Brassica napus HOM05D006350 ORTHO05D007850 4.3e-139 499.2 651 44.7
Aqoxy4G01993 Aquilegia oxysepala HOM05D006350 ORTHO05D007850 1.2e-138 497.7 677 45.2
A03p07020 Brassica napus HOM05D006350 ORTHO05D007850 2.8e-138 496.5 655 44.4
CsaV3_6G049260 Cucumis sativus L. HOM05D006350 ORTHO05D007850 2.8e-138 496.5 682 45.5
MBI02_g10104_MAGBIO Magnolia biondii HOM05D006350 ORTHO05D007850 2.8e-138 496.5 669 44.8
AL6G25990 Arabidopsis lyrata HOM05D006350 ORTHO05D007850 3.1e-137 493.0 655 45.6
Sp6g28900 Schrenkiella parvula HOM05D006350 ORTHO05D007850 6.9e-137 491.9 664 43.8
AT5G15170 Arabidopsis thaliana HOM05D006350 ORTHO05D007850 9.0e-137 491.5 648 45.2
Sabra04G0012300 Salix brachista HOM05D006350 ORTHO05D007850 2.0e-136 490.3 735 43.5
Cc02_g11700 Coffea canephora HOM05D006350 ORTHO05D007850 4.4e-136 489.2 383 65.3
Thhalv10012972m.g Eutrema salsugineum HOM05D006350 ORTHO05D007850 1.7e-135 487.3 658 43.9
arahy.Tifrunner.gnm1.ann1.SC0FBD Arachis hypogaea HOM05D006350 ORTHO05D007850 1.1e-134 484.6 681 44.8
Lj1g0012123 Lotus japonicus HOM05D006350 ORTHO05D007850 1.1e-134 484.6 662 44.7
Carub.0006s1334 Capsella rubella HOM05D006350 ORTHO05D007850 2.4e-134 483.4 657 44.9
Lalb_Chr09g0319631 Lupinus albus HOM05D006350 ORTHO05D007850 3.2e-134 483.0 640 45.6
arahy.Tifrunner.gnm1.ann1.QV9JTX Arachis hypogaea HOM05D006350 ORTHO05D007850 5.1e-132 475.7 728 42.2
Atru.chr10.2148 Acer truncatum HOM05D006350 ORTHO05D007850 6.2e-130 468.8 621 44.8
Os07g0530100 Oryza sativa ssp. japonica HOM05D006350 ORTHO05D007850 2.0e-128 463.8 703 40.0
Sc05g0008900 Simmondsia chinensis HOM05D006350 ORTHO05D007850 7.6e-128 461.8 372 61.0
Zm00001eb323120 Zea mays HOM05D006350 ORTHO05D007850 5.4e-126 455.7 700 39.1
Sed0019871 Sechium edule HOM05D006350 ORTHO05D007850 1.6e-125 454.1 378 60.6
FAN25G1413 Fragaria x ananassa HOM05D006350 ORTHO05D007850 3.3e-123 446.4 599 45.9
CARHR198140 Cardamine hirsuta HOM05D006350 ORTHO05D007850 1.3e-122 444.5 360 61.1
TPR.G10193 Trifolium pratense HOM05D006350 ORTHO05D007850 2.0e-120 437.2 616 44.5
EL10Ac8g19892 Beta vulgaris HOM05D006350 ORTHO05D007850 3.8e-119 433.0 699 41.1
Nn1g03636 Nelumbo nucifera HOM05D006350 ORTHO05D007850 8.4e-119 431.8 577 44.2
CDE05G1739 Ceratophyllum demersum HOM05D006350 ORTHO05D007850 4.2e-110 402.9 631 40.7
Psat3g152760 Pisum sativum HOM05D006350 ORTHO05D007850 1.6e-109 401.0 587 44.0
Hund23514 Selenicereus undatus HOM05D006350 ORTHO05D007850 1.6e-109 401.0 680 40.4
SEGI_36047 Sequoiadendron giganteum HOM05D006350 ORTHO05D007850 1.6e-109 401.0 368 54.9
MELO3C007370.2 Cucumis melo HOM05D006350 ORTHO05D007850 1.5e-107 394.4 582 42.6
Haze_08403 Corylus avellana HOM05D006350 ORTHO05D007850 1.9e-102 377.5 508 45.7
Cpa.g.sc198.9 Carica papaya HOM05D006350 ORTHO05D007850 7.2e-102 375.6 635 39.5
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 4.3e-99 366.3 532 43.2
Lsat_1_v5_gn_1_127601 Lactuca sativa HOM05D006350 ORTHO05D000125 1.9e-94 350.9 492 42.1
PGSC0003DMG400024073 Solanum tuberosum HOM05D006350 ORTHO05D007850 9.7e-91 338.6 504 41.3
Mapoly0129s0047 Marchantia polymorpha HOM05D006350 ORTHO05D007850 2.8e-90 337.0 376 47.1
Hund21368 Selenicereus undatus HOM05D006350 ORTHO05D007850 5.3e-89 332.8 279 60.9
SMO117G0269 Selaginella moellendorffii HOM05D006350 ORTHO05D007850 5.0e-87 326.2 285 58.6
ATR0109G008 Amborella trichopoda HOM05D006350 ORTHO05D007850 6.5e-87 325.9 560 38.9
Dinv17831 Davidia involucrata HOM05D006350 ORTHO05D007850 3.3e-83 313.5 189 80.4
AUR62022012 Chenopodium quinoa HOM05D006350 ORTHO05D007850 2.9e-79 300.4 708 31.8
Hund21371 Selenicereus undatus HOM05D006350 ORTHO05D007850 5.3e-73 279.6 271 55.0
Pp3c10_12100 Physcomitrium patens HOM05D006350 ORTHO05D007850 7.7e-72 275.8 267 52.8
MBI04_g30799_MAGBIO Magnolia biondii HOM05D006350 ORTHO05D007850 3.6e-69 266.9 283 53.4
Eucgr.L01729 Eucalyptus grandis HOM05D006350 ORTHO05D007850 1.4e-65 255.0 399 40.9
HPP92_017615 Vanilla planifolia HOM05D006350 ORTHO05D007850 1.3e-50 205.3 195 55.4
Dinv17832 Davidia involucrata HOM05D006350 ORTHO05D007850 6.4e-50 203.0 452 34.5
MCO12G349 Micromonas commoda HOM05D006350 ORTHO05D007850 2.7e-40 171.0 309 34.6
PRCOL_00001871 Prasinoderma coloniale HOM05D006350 ORTHO05D007850 5.1e-39 166.8 283 37.1
Cc02_g11710 Coffea canephora HOM05D006350 ORTHO05D007850 1.6e-32 145.2 125 56.0
CBR_g28581 Chara braunii HOM05D000019 ORTHO05D000048 3.1e-28 131.0 133 52.6
Cre01.g053200 Chlamydomonas reinhardtii HOM05D006350 ORTHO05D007850 4.0e-28 130.6 104 56.7
unitig_748.g7138 Utricularia gibba HOM05D006350 ORTHO05D007850 6.4e-26 123.2 113 52.2
Nn1g00065 Nelumbo nucifera HOM05D006350 ORTHO05D007850 1.7e-23 115.2 137 41.6
Sc05g0008890 Simmondsia chinensis HOM05D006350 ORTHO05D007850 2.5e-22 111.3 124 47.6
HPP92_017616 Vanilla planifolia HOM05D006350 ORTHO05D007850 4.2e-17 94.0 100 45.0
HPP92_017614 Vanilla planifolia HOM05D006350 ORTHO05D007850 1.2e-16 92.4 82 54.9
Nn1g07027 Nelumbo nucifera HOM05D006350 ORTHO05D007850 2.1e-13 81.6 62 56.5
Cfa024753 Carpinus fangiana HOM05D006350 ORTHO05D007850 2.0e-11 75.1 297 24.9
Nn1g07028 Nelumbo nucifera HOM05D006350 ORTHO05D007850 3.4e-11 74.3 75 49.3
Pp3c20_13830 Physcomitrium patens HOM05D006350 ORTHO05D007850 9.9e-11 72.8 104 41.3
DCAR_001582 Daucus carota HOM05D006350 ORTHO05D007850 8.4e-10 69.7 82 41.5


User provided reference genes

Program Settings