Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050237.1 Olea europaea HOM05D000428 ORTHO05D000014 1.2e-29 132.5 68 100.0
Migut.L00293 Erythranthe guttata HOM05D000428 ORTHO05D005608 7.5e-11 70.1 50 70.0
Migut.L00561 Erythranthe guttata HOM05D000428 ORTHO05D005608 7.5e-11 70.1 50 70.0
SGA_v2.0_scaffold85G26723 Striga asiatica HOM05D000428 ORTHO05D005608 7.5e-11 70.1 50 70.0
MSTRG.23540 Avicennia marina HOM05D000428 ORTHO05D005608 1.7e-10 68.9 50 68.0
Oeu037891.1 Olea europaea HOM05D000428 ORTHO05D005608 3.7e-10 67.8 50 66.0
unitig_736.g22538 Utricularia gibba HOM05D000428 ORTHO05D005608 3.7e-10 67.8 50 68.0
ECA246G0987 Erigeron canadensis HOM05D000428 ORTHO05D005608 8.3e-10 66.6 50 66.0
Lsat_1_v5_gn_5_24320 Lactuca sativa HOM05D000428 ORTHO05D005608 8.3e-10 66.6 50 66.0
SHI22919 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-09 66.2 55 60.0
ATR0733G122 Amborella trichopoda HOM05D000428 ORTHO05D005608 1.8e-09 65.5 50 64.0
CDE07G0828 Ceratophyllum demersum HOM05D000428 ORTHO05D005608 1.8e-09 65.5 50 64.0
MBI16_g35646_MAGBIO Magnolia biondii HOM05D000428 ORTHO05D005608 1.8e-09 65.5 50 64.0
MBI16_g36970_MAGBIO Magnolia biondii HOM05D000428 ORTHO05D005608 1.8e-09 65.5 50 64.0
Ah.03g139440 Amaranthus hybridus HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
AL3G51840 Arabidopsis lyrata HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
EL10Ac6g14921 Beta vulgaris HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
CSS0045131 Camellia sinensis var. sinensis HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
Carub.0003s3271 Capsella rubella HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
Cfa018514 Carpinus fangiana HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
CDE04G3638 Ceratophyllum demersum HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
Ciclev10025862m.g Citrus clementina HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
Haze_25371 Corylus avellana HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
HanXRQChr05g0157731 Helianthus annuus HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
Lj4C198T4 Lonicera japonica HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
Manes.02G141500 Manihot esculenta HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
Nn1g04186 Nelumbo nucifera HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
Peaxi162Scf00759g00212 Petunia axillaris HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
PGR044G2753 Punica granatum HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
Hund16583 Selenicereus undatus HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
THA.LOC104807442 Tarenaya hassleriana HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
HPP92_009245 Vanilla planifolia HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
GSVIVG01018991001 Vitis vinifera HOM05D000428 ORTHO05D005608 2.4e-09 65.1 50 64.0
Aa31LG8G15550 Aethionema arabicum HOM05D000428 ORTHO05D005608 3.1e-09 64.7 50 64.0
CSS0012257 Camellia sinensis var. sinensis HOM05D000428 ORTHO05D005608 3.1e-09 64.7 50 64.0
CSS0018038 Camellia sinensis var. sinensis HOM05D000428 ORTHO05D005608 3.1e-09 64.7 50 64.0
CARHR109120 Cardamine hirsuta HOM05D000428 ORTHO05D005608 3.1e-09 64.7 50 64.0
Sp3g31970 Schrenkiella parvula HOM05D000428 ORTHO05D005608 3.1e-09 64.7 50 64.0
PGSC0003DMG400008934 Solanum tuberosum HOM05D000428 ORTHO05D005608 3.1e-09 64.7 50 64.0
THA.LOC104819794 Tarenaya hassleriana HOM05D000428 ORTHO05D005608 3.1e-09 64.7 50 64.0
TAR376G0105 Trochodendron aralioides HOM05D000428 ORTHO05D005608 4.1e-09 64.3 50 62.0
TAR625G0488 Trochodendron aralioides HOM05D000428 ORTHO05D005608 4.1e-09 64.3 50 64.0
AUR62003178 Chenopodium quinoa HOM05D000428 ORTHO05D005608 5.4e-09 63.9 50 62.0
Hund14143 Selenicereus undatus HOM05D000428 ORTHO05D005608 5.4e-09 63.9 50 62.0
Sc03g0000830 Simmondsia chinensis HOM05D000428 ORTHO05D005608 5.4e-09 63.9 50 62.0
Actinidia35650 Actinidia chinensis HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Aqoxy5G01673 Aquilegia oxysepala HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
CANSAT01G1769 Cannabis sativa HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Cpa.g.sc44.55 Carica papaya HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
CiPaw.01G035300 Carya illinoinensis HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Cc07_g09270 Coffea canephora HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
COL.COLO4_22108 Corchorus olitorius HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Duzib147G0139 Durio zibethinus HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Duzib264G0582 Durio zibethinus HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Eucgr.H02772 Eucalyptus grandis HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
FvH4_7g10600 Fragaria vesca HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
FAN01G3018 Fragaria x ananassa HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
FAN06G0286 Fragaria x ananassa HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
FAN06G3568 Fragaria x ananassa HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
FAN10G3598 Fragaria x ananassa HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Gohir.A10G094825 Gossypium hirsutum HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Gohir.D10G093100 Gossypium hirsutum HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Gorai.011G102300 Gossypium raimondii HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Lj3g0014328 Lotus japonicus HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
MD07G1111200 Malus domestica HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Os10g0457000 Oryza sativa ssp. japonica HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
PSO541G5970 Papaver somniferum HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
PSO675G4237 Papaver somniferum HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Potri.007G028300 Populus trichocarpa HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Prupe.2G134600 Prunus persica HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
QL06p045519 Quercus lobata HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
RcHm_v2.0_Chr1g0348441 Rosa chinensis HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
PGSC0003DMG400005746 Solanum tuberosum HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Thecc.01G038800 Theobroma cacao HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
vmacro17854 Vaccinium macrocarpon HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
Zm00001eb222330 Zea mays HOM05D000428 ORTHO05D005608 7.0e-09 63.5 50 62.0
BcaB07g31661 Brassica carinata HOM05D000428 ORTHO05D005608 9.1e-09 63.2 50 62.0
BcaC04g22900 Brassica carinata HOM05D000428 ORTHO05D005608 9.1e-09 63.2 50 62.0
C09p14060 Brassica napus HOM05D000428 ORTHO05D005608 9.1e-09 63.2 50 62.0
BolC9t54303H Brassica oleracea HOM05D000428 ORTHO05D005608 9.1e-09 63.2 50 62.0
CiPaw.02G015800 Carya illinoinensis HOM05D000428 ORTHO05D005608 9.1e-09 63.2 46 65.2
Ca_17089_v3 Cicer arietinum L. HOM05D000428 ORTHO05D005608 9.1e-09 63.2 50 62.0
Lalb_Chr03g0043151 Lupinus albus HOM05D000428 ORTHO05D005608 9.1e-09 63.2 50 62.0
Medtr3g065190 Medicago truncatula HOM05D000428 ORTHO05D005608 9.1e-09 63.2 50 62.0
Psat5g120280 Pisum sativum HOM05D000428 ORTHO05D005608 9.1e-09 63.2 50 62.0
Potri.005G125300 Populus trichocarpa HOM05D000428 ORTHO05D005608 9.1e-09 63.2 50 62.0
Sabra05G0102900 Salix brachista HOM05D000428 ORTHO05D005608 9.1e-09 63.2 50 62.0
TPR.G24896 Trifolium pratense HOM05D000428 ORTHO05D005608 9.1e-09 63.2 50 62.0
AT2G18510 Arabidopsis thaliana HOM05D000428 ORTHO05D005608 1.2e-08 62.8 50 62.0
arahy.Tifrunner.gnm1.ann1.57NA14 Arachis hypogaea HOM05D000428 ORTHO05D005608 1.2e-08 62.8 50 62.0
arahy.Tifrunner.gnm1.ann1.FMI53U Arachis hypogaea HOM05D000428 ORTHO05D005608 1.2e-08 62.8 50 62.0
Cfa017067 Carpinus fangiana HOM05D000428 ORTHO05D005608 1.2e-08 62.8 44 65.9
Thhalv10022741m.g Eutrema salsugineum HOM05D000428 ORTHO05D005608 1.6e-08 62.4 50 62.0
Nitab4.5_0001456g0190 Nicotiana tabacum HOM05D000428 ORTHO05D005608 1.6e-08 62.4 50 60.0
Nitab4.5_0003968g0050 Nicotiana tabacum HOM05D000428 ORTHO05D005608 1.6e-08 62.4 50 60.0
TWI53G1177 Tripterygium wilfordii HOM05D000428 ORTHO05D005608 1.6e-08 62.4 50 60.0
ClCG05G007140 Citrullus lanatus HOM05D000428 ORTHO05D005608 2.0e-08 62.0 50 60.0
CsaV3_3G015880 Cucumis sativus L. HOM05D000428 ORTHO05D005608 2.0e-08 62.0 50 60.0
Glyma.09G000800 Glycine max HOM05D004918 ORTHO05D005706 2.0e-08 62.0 50 60.0
Glyma.09G001000 Glycine max HOM05D000428 ORTHO05D005608 2.0e-08 62.0 50 60.0
Phvul.011G214800 Phaseolus vulgaris HOM05D000428 ORTHO05D005608 2.0e-08 62.0 50 60.0
Solyc03g118800.3 Solanum lycopersicum HOM05D000428 ORTHO05D005608 2.0e-08 62.0 50 60.0
Sopen03g037750 Solanum pennellii HOM05D000428 ORTHO05D005608 2.0e-08 62.0 50 60.0
VMungo1127G1890 Vigna mungo HOM05D000428 ORTHO05D005608 2.0e-08 62.0 50 60.0
Pp3c12_13810 Physcomitrium patens HOM05D000428 ORTHO05D005608 2.7e-08 61.6 50 58.0
Sed0010481 Sechium edule HOM05D000428 ORTHO05D005608 2.7e-08 61.6 50 60.0
Glyma.12G240700 Glycine max HOM05D000428 ORTHO05D005608 3.5e-08 61.2 50 60.0
Mapoly0043s0056 Marchantia polymorpha HOM05D000428 ORTHO05D005608 3.5e-08 61.2 50 58.0
TWI09G0303 Tripterygium wilfordii HOM05D000428 ORTHO05D005608 3.5e-08 61.2 50 60.0
BcaB03g16632 Brassica carinata HOM05D000428 ORTHO05D005608 4.5e-08 60.8 50 60.0
BcaB07g31658 Brassica carinata HOM05D000428 ORTHO05D005608 4.5e-08 60.8 38 73.7
A09p11940 Brassica napus HOM05D000428 ORTHO05D005608 4.5e-08 60.8 50 60.0
BraA09t36839Z Brassica rapa HOM05D000428 ORTHO05D005608 4.5e-08 60.8 50 60.0
A07p02180 Brassica napus HOM05D000428 ORTHO05D005608 5.9e-08 60.5 50 60.0
C07p04290 Brassica napus HOM05D000428 ORTHO05D005608 5.9e-08 60.5 50 60.0
BolC7t40824H Brassica oleracea HOM05D000428 ORTHO05D005608 5.9e-08 60.5 50 60.0
BraA07t28012Z Brassica rapa HOM05D000428 ORTHO05D005608 5.9e-08 60.5 50 60.0
CBR_g39039 Chara braunii HOM05D000428 ORTHO05D005608 5.9e-08 60.5 50 56.0
Dinv39964 Davidia involucrata HOM05D000428 ORTHO05D005608 5.9e-08 60.5 38 73.7
FvH4_7g22430 Fragaria vesca HOM05D000428 ORTHO05D005608 7.7e-08 60.1 50 60.0
TAR628G0051 Trochodendron aralioides HOM05D000428 ORTHO05D005608 1.0e-07 59.7 50 56.0
Carub.0003s2855 Capsella rubella HOM05D000428 ORTHO05D005608 1.7e-07 58.9 45 64.4
Cre06.g254800 Chlamydomonas reinhardtii HOM05D000428 ORTHO05D005608 2.3e-07 58.5 41 61.0
RcHm_v2.0_Chr2g0096981 Rosa chinensis HOM05D000428 ORTHO05D005608 2.3e-07 58.5 33 81.8
AL3G46120 Arabidopsis lyrata HOM05D000428 ORTHO05D005608 2.9e-07 58.2 33 75.8
Carub.0124s0001 Capsella rubella HOM05D000428 ORTHO05D005608 2.9e-07 58.2 66 50.0
Actinidia37019 Actinidia chinensis HOM05D000428 ORTHO05D005608 3.8e-07 57.8 42 69.0
arahy.Tifrunner.gnm1.ann1.IVLA97 Arachis hypogaea HOM05D000428 ORTHO05D005608 5.0e-07 57.4 45 62.2
BcaC06g36421 Brassica carinata HOM05D000428 ORTHO05D005608 1.5e-06 55.8 46 58.7
Thhalv10023032m.g Eutrema salsugineum HOM05D000428 ORTHO05D005608 1.9e-06 55.5 39 66.7
RcHm_v2.0_Chr5g0061171 Rosa chinensis HOM05D000428 ORTHO05D005608 3.3e-06 54.7 46 58.7
BcaC08g46293 Brassica carinata HOM05D015772 ORTHO05D020004 7.2e-06 53.5 49 57.1
BolC6t39265H Brassica oleracea HOM05D015772 ORTHO05D020004 7.2e-06 53.5 49 57.1


User provided reference genes

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