Gene: Carub.0124s0001

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0124s0001
  • Transcript Identifier Carub.0124s0001.1
  • Gene Type Coding gene
  • Location scaffold_124 : 6842-8641 : negative

Gene Family Information

  • ID HOM05D000428
  • #Genes/#Species 1201/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0124s0001.v1.1
  • pacid 39250102
  • synonym Carubv10007935m.g

Descriptions

  • Description PTHR24012:SF449 - SPLICING FACTOR 3B SUBUNIT 4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D000428

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034158 SF3B4, RNA recognition motif 1
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR034159 SF3B4, RNA recognition motif 2
Mapman id Description
16.2.1.2.4.4 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.component SF3B4