Gene: Potri.005G125300

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.005G125300
  • Transcript Identifier Potri.005G125300.1
  • Gene Type Coding gene
  • Location Chr05 : 9328624-9331962 : negative

Gene Family Information

  • ID HOM05D000428
  • #Genes/#Species 1201/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.005G125300.v4.1
  • pacid 42803783

Descriptions

  • Description K12831 - splicing factor 3B subunit 4 (SF3B4, SAP49)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D000428

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034159 SF3B4, RNA recognition motif 2
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR034158 SF3B4, RNA recognition motif 1
IPR000504 RNA recognition motif domain
Mapman id Description
16.2.1.2.4.4 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.component SF3B4