Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050209.1 Olea europaea HOM05D000104 ORTHO05D005604 2.8e-208 728.4 374 100.0
SGA_v2.0_scaffold8G04607 Striga asiatica HOM05D000104 ORTHO05D005604 5.8e-73 278.9 386 44.3
Migut.D00580 Erythranthe guttata HOM05D000104 ORTHO05D005604 2.9e-72 276.6 374 45.7
Dinv36279 Davidia involucrata HOM05D000104 ORTHO05D005604 2.1e-67 260.4 392 42.9
Dinv08033 Davidia involucrata HOM05D000104 ORTHO05D005604 6.7e-61 238.8 431 37.8
Cc00_g10730 Coffea canephora HOM05D000104 ORTHO05D005604 1.5e-60 237.7 387 40.1
Nitab4.5_0006542g0020 Nicotiana tabacum HOM05D000104 ORTHO05D005604 1.3e-59 234.6 389 42.2
Solyc11g062010.3 Solanum lycopersicum HOM05D000104 ORTHO05D005604 6.3e-59 232.3 390 43.1
Sopen11g023970 Solanum pennellii HOM05D000104 ORTHO05D005604 1.8e-58 230.7 390 42.8
Nitab4.5_0000492g0040 Nicotiana tabacum HOM05D000104 ORTHO05D005604 1.7e-56 224.2 390 42.1
DCAR_013049 Daucus carota HOM05D000104 ORTHO05D005604 7.2e-55 218.8 410 37.3
Actinidia16312 Actinidia chinensis HOM05D000104 ORTHO05D005604 6.1e-54 215.7 406 37.9
Atru.chr3.1960 Acer truncatum HOM05D000104 ORTHO05D005604 1.0e-53 214.9 418 36.8
QL06p007127 Quercus lobata HOM05D000104 ORTHO05D005604 2.5e-52 210.3 389 38.8
TAR362G0998 Trochodendron aralioides HOM05D000104 ORTHO05D005604 6.9e-50 202.2 424 36.8
Cfa015506 Carpinus fangiana HOM05D000104 ORTHO05D005604 9.1e-50 201.8 395 37.0
CANSAT78G1941 Cannabis sativa HOM05D000104 ORTHO05D005604 1.5e-49 201.1 387 34.9
Peaxi162Scf00029g00307 Petunia axillaris HOM05D000104 ORTHO05D005604 2.0e-49 200.7 383 38.4
GSVIVG01017820001 Vitis vinifera HOM05D000104 ORTHO05D005604 4.5e-49 199.5 427 33.7
CAN.G71.7 Capsicum annuum HOM05D000104 ORTHO05D005604 1.9e-47 194.1 391 39.4
Lj1C354G8 Lonicera japonica HOM05D000104 ORTHO05D005604 5.5e-47 192.6 390 35.6
Thecc.04G275900 Theobroma cacao HOM05D000104 ORTHO05D005604 6.1e-46 189.1 381 37.8
Ciclev10004115m.g Citrus clementina HOM05D000104 ORTHO05D005604 7.9e-46 188.7 390 38.2
COL.COLO4_25219 Corchorus olitorius HOM05D000104 ORTHO05D005604 3.9e-45 186.4 380 35.5
Prupe.1G143200 Prunus persica HOM05D000104 ORTHO05D005604 1.5e-44 184.5 399 35.6
Manes.15G017800 Manihot esculenta HOM05D000104 ORTHO05D005604 2.0e-44 184.1 392 34.7
TWI53G1887 Tripterygium wilfordii HOM05D000104 ORTHO05D005604 1.4e-42 177.9 432 33.1
RcHm_v2.0_Chr4g0420741 Rosa chinensis HOM05D000104 ORTHO05D005604 2.0e-41 174.1 387 34.9
Duzib151G0282 Durio zibethinus HOM05D000104 ORTHO05D005604 1.3e-40 171.4 389 35.0
FAN17G1482 Fragaria x ananassa HOM05D000104 ORTHO05D005604 2.2e-40 170.6 395 33.2
FAN07G2961 Fragaria x ananassa HOM05D000104 ORTHO05D005604 8.5e-40 168.7 396 34.1
Gohir.D10G165750 Gossypium hirsutum HOM05D000104 ORTHO05D005604 1.1e-39 168.3 382 34.6
Potri.008G195900 Populus trichocarpa HOM05D000104 ORTHO05D005604 1.1e-39 168.3 393 36.4
Duzib212G0880 Durio zibethinus HOM05D000104 ORTHO05D005604 3.2e-39 166.8 381 33.9
FAN22G0992 Fragaria x ananassa HOM05D000104 ORTHO05D005604 4.2e-39 166.4 399 33.6
Gohir.A10G101880 Gossypium hirsutum HOM05D000104 ORTHO05D005604 4.2e-39 166.4 384 34.1
vmacro04191 Vaccinium macrocarpon HOM05D000104 ORTHO05D005604 9.4e-39 165.2 416 34.6
FvH4_4g17030 Fragaria vesca HOM05D000104 ORTHO05D005604 1.2e-38 164.9 399 33.3
FAN12G1949 Fragaria x ananassa HOM05D000104 ORTHO05D005604 3.6e-38 163.3 399 33.6
TAR365G0556 Trochodendron aralioides HOM05D000104 ORTHO05D005604 3.6e-38 163.3 420 34.5
Glyma.17G022300 Glycine max HOM05D000104 ORTHO05D005604 4.7e-38 162.9 407 34.9
Rhsim13G0223800 Rhododendron simsii HOM05D000104 ORTHO05D005604 4.7e-38 162.9 414 33.1
CiPaw.02G087300 Carya illinoinensis HOM05D000104 ORTHO05D005604 1.4e-37 161.4 397 33.2
MELO3C006601.2 Cucumis melo HOM05D000104 ORTHO05D005604 1.4e-37 161.4 422 33.6
Sabra08G0149100 Salix brachista HOM05D000104 ORTHO05D005604 1.8e-37 161.0 379 35.4
Gorai.011G185100 Gossypium raimondii HOM05D000104 ORTHO05D005604 3.0e-37 160.2 386 33.7
Glyma.07G252100 Glycine max HOM05D000104 ORTHO05D005604 5.2e-37 159.5 418 33.5
Potri.010G019150 Populus trichocarpa HOM05D000104 ORTHO05D005604 8.8e-37 158.7 395 36.5
Ca_21553_v3 Cicer arietinum L. HOM05D000104 ORTHO05D005604 7.4e-36 155.6 377 32.4
CsaV3_3G014070 Cucumis sativus L. HOM05D000104 ORTHO05D005604 7.4e-36 155.6 416 32.9
Sed0001718 Sechium edule HOM05D000104 ORTHO05D005604 7.4e-36 155.6 420 32.4
Cpa.g.sc16.94 Carica papaya HOM05D000104 ORTHO05D005604 9.7e-36 155.2 425 32.7
Haze_01047 Corylus avellana HOM05D000104 ORTHO05D005604 9.7e-36 155.2 347 34.0
Nn3g21275 Nelumbo nucifera HOM05D000104 ORTHO05D005604 9.7e-36 155.2 477 31.2
MD13G1174700 Malus domestica HOM05D000104 ORTHO05D005604 1.7e-35 154.5 378 34.4
TPR.G14962 Trifolium pratense HOM05D000104 ORTHO05D005604 2.2e-35 154.1 369 32.8
Lalb_Chr13g0303901 Lupinus albus HOM05D000104 ORTHO05D005604 6.3e-35 152.5 381 32.0
Psat4g029520 Pisum sativum HOM05D000104 ORTHO05D005604 8.2e-35 152.1 374 32.6
Gohir.D09G234100 Gossypium hirsutum HOM05D000104 ORTHO05D005604 7.0e-34 149.1 392 32.4
Phvul.003G100200 Phaseolus vulgaris HOM05D000104 ORTHO05D005604 1.2e-33 148.3 397 34.5
MD16G1176400 Malus domestica HOM05D000104 ORTHO05D005604 4.5e-33 146.4 379 32.7
Lj1A357G13 Lonicera japonica HOM05D000104 ORTHO05D005604 8.5e-32 142.1 372 30.9
Gorai.006G257000 Gossypium raimondii HOM05D000104 ORTHO05D005604 1.9e-31 141.0 380 32.1
Lalb_Chr12g0196421 Lupinus albus HOM05D000104 ORTHO05D005604 9.4e-31 138.7 385 30.4
Medtr4g118720 Medicago truncatula HOM05D000104 ORTHO05D005604 2.7e-30 137.1 405 28.6
PGR042G2589 Punica granatum HOM05D000104 ORTHO05D005604 4.7e-30 136.3 386 29.8
CSS0040868 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D005604 5.7e-28 129.4 193 38.9
Lj4g0028061 Lotus japonicus HOM05D000104 ORTHO05D005604 7.5e-28 129.0 362 29.6
PSO801G0783 Papaver somniferum HOM05D000104 ORTHO05D005604 3.7e-27 126.7 423 30.3
ClCG05G005740 Citrullus lanatus HOM05D000104 ORTHO05D005604 4.8e-27 126.3 329 31.6
Actinidia06887 Actinidia chinensis HOM05D000738 ORTHO05D000675 3.5e-25 120.2 216 37.5
Aqoxy5G00624 Aquilegia oxysepala HOM05D000104 ORTHO05D005604 2.2e-24 117.5 428 29.0
AUR62040388 Chenopodium quinoa HOM05D000104 ORTHO05D005604 1.5e-23 114.8 425 31.5
THA.LOC104802562 Tarenaya hassleriana HOM05D000104 ORTHO05D005604 1.5e-23 114.8 375 29.9
Lsat_1_v5_gn_8_137440 Lactuca sativa HOM05D000104 ORTHO05D005604 1.9e-23 114.4 169 45.0
arahy.Tifrunner.gnm1.ann1.N8S0IJ Arachis hypogaea HOM05D000104 ORTHO05D005604 2.5e-23 114.0 368 30.4
Lj6g0025055 Lotus japonicus HOM05D000104 ORTHO05D005604 3.2e-23 113.6 416 29.3
arahy.Tifrunner.gnm1.ann1.Q30CKZ Arachis hypogaea HOM05D000104 ORTHO05D005604 5.5e-23 112.8 368 30.2
arahy.Tifrunner.gnm1.ann1.S83KV6 Arachis hypogaea HOM05D000104 ORTHO05D005604 7.2e-23 112.5 368 30.2
A03p21840 Brassica napus HOM05D000104 ORTHO05D005604 3.6e-22 110.2 175 42.9
AUR62042660 Chenopodium quinoa HOM05D000104 ORTHO05D005604 3.6e-22 110.2 425 30.1
PSO339G1276 Papaver somniferum HOM05D000104 ORTHO05D005604 3.6e-22 110.2 432 28.9
C03p25910 Brassica napus HOM05D000104 ORTHO05D005604 6.1e-22 109.4 157 46.5
BolC3t14976H Brassica oleracea HOM05D000104 ORTHO05D005604 8.0e-22 109.0 157 46.5
arahy.Tifrunner.gnm1.ann1.Z04G07 Arachis hypogaea HOM05D000104 ORTHO05D005604 1.0e-21 108.6 398 29.6
BraA03t11420Z Brassica rapa HOM05D000104 ORTHO05D005604 1.0e-21 108.6 193 40.4
arahy.Tifrunner.gnm1.ann1.Z03QFY Arachis hypogaea HOM05D000104 ORTHO05D005604 1.8e-21 107.8 391 29.9
HanXRQChr17g0554821 Helianthus annuus HOM05D000104 ORTHO05D005604 8.8e-21 105.5 371 29.6
Sp4g21400 Schrenkiella parvula HOM05D000104 ORTHO05D005604 3.4e-20 103.6 194 40.7
Thhalv10016121m.g Eutrema salsugineum HOM05D000104 ORTHO05D005604 9.8e-20 102.1 364 27.7
Aa31LG5G20580 Aethionema arabicum HOM05D000104 ORTHO05D005604 1.3e-19 101.7 172 43.0
EL10Ac3g06521 Beta vulgaris HOM05D000104 ORTHO05D005604 1.7e-19 101.3 427 29.3
TAR365G0890 Trochodendron aralioides HOM05D000104 ORTHO05D005604 1.1e-18 98.6 191 40.8
Ah.04g153970 Amaranthus hybridus HOM05D000104 ORTHO05D005604 1.4e-18 98.2 385 28.6
THA.LOC104820235 Tarenaya hassleriana HOM05D000104 ORTHO05D005604 1.8e-18 97.8 376 27.9
Cpa.g.sc16.103 Carica papaya HOM05D000104 ORTHO05D005604 3.1e-18 97.1 185 40.5
ECA233G1169 Erigeron canadensis HOM05D000104 ORTHO05D005604 5.4e-18 96.3 376 28.2
Zm00001eb280740 Zea mays HOM05D000104 ORTHO05D005604 4.5e-17 93.2 366 27.9
CDE05G2634 Ceratophyllum demersum HOM05D000104 ORTHO05D005604 1.3e-16 91.7 394 27.4
AT2G28290 Arabidopsis thaliana HOM05D000104 ORTHO05D005604 2.9e-16 90.5 128 46.9
AL4G21810 Arabidopsis lyrata HOM05D000104 ORTHO05D005604 6.6e-16 89.4 170 40.0
CARHR121200 Cardamine hirsuta HOM05D000104 ORTHO05D005604 6.6e-16 89.4 118 49.2
unitig_32.g11765 Utricularia gibba HOM05D000186 ORTHO05D002329 5.5e-15 86.3 133 39.1
arahy.Tifrunner.gnm1.ann1.Q10S7I Arachis hypogaea HOM05D000104 ORTHO05D005604 9.5e-15 85.5 354 28.8
BcaB01g03644 Brassica carinata HOM05D000104 ORTHO05D005604 1.2e-14 85.1 192 37.5
TAR365G0129 Trochodendron aralioides HOM05D000104 ORTHO05D005604 3.6e-14 83.6 152 41.4
arahy.Tifrunner.gnm1.ann1.0XZV5D Arachis hypogaea HOM05D000846 ORTHO05D001340 6.1e-14 82.8 125 42.4
HPP92_007983 Vanilla planifolia HOM05D002012 ORTHO05D001992 6.1e-14 82.8 102 47.1
Actinidia06888 Actinidia chinensis HOM05D000104 ORTHO05D005604 1.0e-13 82.0 148 35.1
SHI37476 Sapria himalayana HOM05D005377 ORTHO05D005604 3.0e-13 80.5 77 50.6
ATR1101G061 Amborella trichopoda HOM05D000104 ORTHO05D005604 5.7e-12 76.3 83 50.6
MBI19_g34717_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005604 8.6e-08 62.4 375 26.7
SEGI_16038 Sequoiadendron giganteum HOM05D000104 ORTHO05D005604 3.3e-07 60.5 90 41.1
Mapoly0171s0025 Marchantia polymorpha HOM05D000104 ORTHO05D005604 1.2e-06 58.5 94 36.2


User provided reference genes

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