Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049600.1 Olea europaea HOM05D004151 ORTHO05D004775 1.0e-76 290.4 197 100.0
Oeu059999.1 Olea europaea HOM05D004151 ORTHO05D004775 1.5e-59 233.4 195 82.1
Dinv14579 Davidia involucrata HOM05D004151 ORTHO05D004775 4.2e-54 215.3 180 83.9
Nitab4.5_0009048g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.2e-53 213.8 171 80.1
Nitab4.5_0007542g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 2.7e-53 212.6 146 78.8
Solyc10g078540.3 Solanum lycopersicum HOM05D004151 ORTHO05D004775 3.5e-53 212.2 146 82.2
Sopen10g029190 Solanum pennellii HOM05D004151 ORTHO05D004775 3.5e-53 212.2 146 82.2
PGSC0003DMG400008366 Solanum tuberosum HOM05D004151 ORTHO05D004775 7.9e-53 211.1 146 81.5
Atru.chr5.2062 Acer truncatum HOM05D004151 ORTHO05D004775 1.3e-52 210.3 193 70.5
Cc06_g22960 Coffea canephora HOM05D004151 ORTHO05D004775 1.8e-52 209.9 179 79.9
Atru.chr5.2060 Acer truncatum HOM05D004151 ORTHO05D004775 1.9e-51 206.5 193 69.9
Lj1g0021266 Lotus japonicus HOM05D004151 ORTHO05D004775 3.3e-51 205.7 133 81.2
Aa31LG5G14500 Aethionema arabicum HOM05D004151 ORTHO05D004775 4.3e-51 205.3 134 85.1
Dinv37014 Davidia involucrata HOM05D004151 ORTHO05D004775 4.3e-51 205.3 175 77.7
HPP92_021240 Vanilla planifolia HOM05D004151 ORTHO05D004775 4.3e-51 205.3 145 85.5
Psat0s1971g0280 Pisum sativum HOM05D004151 ORTHO05D004775 5.6e-51 204.9 178 82.0
Peaxi162Scf00003g04832 Petunia axillaris HOM05D004151 ORTHO05D004775 7.4e-51 204.5 146 74.0
Sed0025621 Sechium edule HOM05D004151 ORTHO05D004775 9.6e-51 204.1 173 74.6
unitig_21.g20195 Utricularia gibba HOM05D004151 ORTHO05D004775 9.6e-51 204.1 146 80.1
MELO3C008801.2 Cucumis melo HOM05D004151 ORTHO05D004775 1.6e-50 203.4 169 85.8
CsaV3_4G013280 Cucumis sativus L. HOM05D004151 ORTHO05D004775 2.1e-50 203.0 168 78.0
CANSAT78G0749 Cannabis sativa HOM05D004151 ORTHO05D004775 2.8e-50 202.6 134 82.1
TWI32G1207 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 2.8e-50 202.6 177 79.1
Sc25g0004980 Simmondsia chinensis HOM05D004151 ORTHO05D004775 3.7e-50 202.2 172 72.7
CDE06G0359 Ceratophyllum demersum HOM05D004151 ORTHO05D004775 4.8e-50 201.8 147 81.0
Nn7g35851 Nelumbo nucifera HOM05D004151 ORTHO05D004775 4.8e-50 201.8 145 85.5
THA.LOC104827273 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 4.8e-50 201.8 147 83.7
Thecc.05G294500 Theobroma cacao HOM05D004151 ORTHO05D004775 6.2e-50 201.4 172 81.4
TAR369G0512 Trochodendron aralioides HOM05D004151 ORTHO05D004775 6.2e-50 201.4 134 85.1
Migut.J01888 Erythranthe guttata HOM05D004151 ORTHO05D004775 1.1e-49 200.7 147 83.7
THA.LOC104802867 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 2.4e-49 199.5 170 82.4
MSTRG.19934 Avicennia marina HOM05D004151 ORTHO05D004775 3.1e-49 199.1 183 70.5
Duzib177G0709 Durio zibethinus HOM05D004151 ORTHO05D004775 3.1e-49 199.1 173 79.8
Cfa016441 Carpinus fangiana HOM05D004151 ORTHO05D004775 4.0e-49 198.7 176 73.9
ClCG04G005310 Citrullus lanatus HOM05D004151 ORTHO05D004775 4.0e-49 198.7 177 81.4
Potri.013G058400 Populus trichocarpa HOM05D004151 ORTHO05D004775 4.0e-49 198.7 106 88.7
QL07p019530 Quercus lobata HOM05D004151 ORTHO05D004775 4.0e-49 198.7 107 89.7
Medtr7g085640 Medicago truncatula HOM05D004151 ORTHO05D004775 5.3e-49 198.4 134 81.3
GSVIVG01033401001 Vitis vinifera HOM05D004151 ORTHO05D004775 5.3e-49 198.4 178 71.9
SGA_v2.0_scaffold274G46513 Striga asiatica HOM05D004151 ORTHO05D004775 9.0e-49 197.6 158 75.3
FvH4_1g30320 Fragaria vesca HOM05D004151 ORTHO05D004775 1.2e-48 197.2 151 78.8
FAN19G1796 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.2e-48 197.2 151 80.8
FAN26G2823 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.2e-48 197.2 151 80.8
SEGI_32651 Sequoiadendron giganteum HOM05D004151 ORTHO05D004775 1.2e-48 197.2 147 78.9
HanXRQChr08g0216931 Helianthus annuus HOM05D004151 ORTHO05D004775 1.5e-48 196.8 148 77.0
Lalb_Chr14g0364491 Lupinus albus HOM05D004151 ORTHO05D004775 1.5e-48 196.8 170 78.8
Potri.019G034900 Populus trichocarpa HOM05D004151 ORTHO05D004775 1.5e-48 196.8 108 88.0
Aa31LG11G11430 Aethionema arabicum HOM05D004151 ORTHO05D004775 2.0e-48 196.4 171 82.5
arahy.Tifrunner.gnm1.ann1.JDMG7B Arachis hypogaea HOM05D004151 ORTHO05D004775 2.0e-48 196.4 167 85.0
arahy.Tifrunner.gnm1.ann1.PLSY77 Arachis hypogaea HOM05D004151 ORTHO05D004775 2.0e-48 196.4 167 85.0
Duzib106G1401 Durio zibethinus HOM05D004151 ORTHO05D004775 2.0e-48 196.4 172 78.5
Manes.08G144000 Manihot esculenta HOM05D004151 ORTHO05D004775 2.0e-48 196.4 170 81.8
Zm00001eb200450 Zea mays HOM05D004151 ORTHO05D004775 2.0e-48 196.4 142 86.6
Aqoxy1G00486 Aquilegia oxysepala HOM05D004151 ORTHO05D004775 2.6e-48 196.1 174 80.5
TPR.G5895 Trifolium pratense HOM05D004151 ORTHO05D004775 2.6e-48 196.1 176 77.3
Lsat_1_v5_gn_8_24760 Lactuca sativa HOM05D004151 ORTHO05D004775 3.4e-48 195.7 129 85.3
Hund24835 Selenicereus undatus HOM05D004151 ORTHO05D004775 3.4e-48 195.7 176 79.5
Gohir.A08G213200 Gossypium hirsutum HOM05D004151 ORTHO05D004775 4.5e-48 195.3 172 81.4
PSO063G0165 Papaver somniferum HOM05D004151 ORTHO05D004775 4.5e-48 195.3 149 78.5
PGR142G1491 Punica granatum HOM05D004151 ORTHO05D004775 4.5e-48 195.3 169 82.8
VMungo1383G2477 Vigna mungo HOM05D004151 ORTHO05D004775 4.5e-48 195.3 146 84.2
FAN23G0170 Fragaria x ananassa HOM05D004151 ORTHO05D004775 5.8e-48 194.9 151 80.1
FAN28G2413 Fragaria x ananassa HOM05D004151 ORTHO05D004775 5.8e-48 194.9 138 82.6
Gohir.D08G230300 Gossypium hirsutum HOM05D004151 ORTHO05D004775 5.8e-48 194.9 171 81.9
Gorai.004G244500 Gossypium raimondii HOM05D004151 ORTHO05D004775 5.8e-48 194.9 171 81.9
SalBow5G4201 Salvia bowleyana HOM05D004151 ORTHO05D004775 5.8e-48 194.9 139 79.1
Lsat_1_v5_gn_8_145841 Lactuca sativa HOM05D004151 ORTHO05D004775 7.6e-48 194.5 106 87.7
PSO782G4796 Papaver somniferum HOM05D004151 ORTHO05D004775 7.6e-48 194.5 146 77.4
RcHm_v2.0_Chr3g0490211 Rosa chinensis HOM05D004151 ORTHO05D004775 7.6e-48 194.5 171 75.4
Ah.06g191800 Amaranthus hybridus HOM05D004151 ORTHO05D004775 1.0e-47 194.1 174 73.6
Haze_19418 Corylus avellana HOM05D004151 ORTHO05D004775 1.0e-47 194.1 152 78.9
Haze_19447 Corylus avellana HOM05D004151 ORTHO05D004775 1.0e-47 194.1 152 78.9
Gohir.D11G310400 Gossypium hirsutum HOM05D004151 ORTHO05D004775 1.0e-47 194.1 172 81.4
Gorai.007G343400 Gossypium raimondii HOM05D004151 ORTHO05D004775 1.0e-47 194.1 172 81.4
PSO384G0229 Papaver somniferum HOM05D004151 ORTHO05D004775 1.0e-47 194.1 147 84.4
Phvul.001G110400 Phaseolus vulgaris HOM05D004151 ORTHO05D004775 1.0e-47 194.1 153 77.8
Sabra13G0051900 Salix brachista HOM05D004151 ORTHO05D004775 1.0e-47 194.1 184 72.8
Sed0023399 Sechium edule HOM05D004151 ORTHO05D004775 1.0e-47 194.1 173 82.1
CSS0045523 Camellia sinensis var. sinensis HOM05D004151 ORTHO05D004775 1.3e-47 193.7 132 84.8
Ah.13g075350 Amaranthus hybridus HOM05D004151 ORTHO05D004775 1.7e-47 193.4 151 79.5
Os11g0579800 Oryza sativa ssp. japonica HOM05D004151 ORTHO05D004775 1.7e-47 193.4 149 79.2
PSO339G5713 Papaver somniferum HOM05D004151 ORTHO05D004775 1.7e-47 193.4 141 87.2
Sp6g26140 Schrenkiella parvula HOM05D004151 ORTHO05D004775 1.7e-47 193.4 148 77.0
ATR0697G007 Amborella trichopoda HOM05D004151 ORTHO05D004775 2.2e-47 193.0 140 87.9
Glyma.16G041400 Glycine max HOM05D004151 ORTHO05D004775 2.2e-47 193.0 167 79.6
Glyma.19G110900 Glycine max HOM05D004151 ORTHO05D004775 2.2e-47 193.0 130 81.5
MD05G1045500 Malus domestica HOM05D004151 ORTHO05D004775 2.2e-47 193.0 185 71.4
Manes.09G141400 Manihot esculenta HOM05D004151 ORTHO05D004775 2.2e-47 193.0 171 79.5
Thhalv10014755m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 2.9e-47 192.6 146 71.2
Sp3g02890 Schrenkiella parvula HOM05D004151 ORTHO05D004775 2.9e-47 192.6 150 80.0
Actinidia22083 Actinidia chinensis HOM05D004151 ORTHO05D004775 3.8e-47 192.2 172 80.8
BcaNung05745 Brassica carinata HOM05D004151 ORTHO05D004775 3.8e-47 192.2 133 72.9
Thhalv10021561m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 3.8e-47 192.2 151 80.1
CARHR078040 Cardamine hirsuta HOM05D004151 ORTHO05D004775 4.9e-47 191.8 134 73.1
BcaC03g13582 Brassica carinata HOM05D004151 ORTHO05D004775 6.5e-47 191.4 173 69.4
BolC1t05799H Brassica oleracea HOM05D004151 ORTHO05D004775 6.5e-47 191.4 178 69.7
BolC2t06882H Brassica oleracea HOM05D004151 ORTHO05D004775 6.5e-47 191.4 173 69.4
Gohir.A11G296500 Gossypium hirsutum HOM05D004151 ORTHO05D004775 6.5e-47 191.4 139 84.9
Lalb_Chr22g0359191 Lupinus albus HOM05D004151 ORTHO05D004775 6.5e-47 191.4 131 82.4
TWI34G0161 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 6.5e-47 191.4 160 75.6
EL10Ac3g06820 Beta vulgaris HOM05D004151 ORTHO05D004775 8.4e-47 191.0 147 83.0
HanXRQChr07g0204461 Helianthus annuus HOM05D004151 ORTHO05D004775 8.4e-47 191.0 173 80.3
CARHR194880 Cardamine hirsuta HOM05D004151 ORTHO05D004775 1.4e-46 190.3 189 69.8
CiPaw.09G001900 Carya illinoinensis HOM05D004151 ORTHO05D004775 1.9e-46 189.9 171 77.8
Hma1.2p1_0134F.1_g061640 Hydrangea macrophylla HOM05D004151 ORTHO05D004775 1.9e-46 189.9 142 82.4
AT3G03920 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 4.2e-46 188.7 159 64.8
BolC3t13499H Brassica oleracea HOM05D004151 ORTHO05D004775 4.2e-46 188.7 154 77.3
COL.COLO4_13597 Corchorus olitorius HOM05D004151 ORTHO05D004775 4.2e-46 188.7 142 83.1
MD00G1189600 Malus domestica HOM05D004151 ORTHO05D004775 9.3e-46 187.6 185 68.1
Prupe.8G064800 Prunus persica HOM05D004151 ORTHO05D004775 9.3e-46 187.6 176 77.8
AL3G13810 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 1.2e-45 187.2 152 77.6
C02p09730 Brassica napus HOM05D004151 ORTHO05D004775 1.2e-45 187.2 173 68.2
BraA01t04550Z Brassica rapa HOM05D004151 ORTHO05D004775 1.2e-45 187.2 177 67.8
A03p08690 Brassica napus HOM05D004151 ORTHO05D004775 2.1e-45 186.4 182 64.3
Sabra19G0042500 Salix brachista HOM05D004151 ORTHO05D004775 2.1e-45 186.4 138 86.2
Sabra19G0044800 Salix brachista HOM05D004151 ORTHO05D004775 2.1e-45 186.4 138 86.2
AUR62032690 Chenopodium quinoa HOM05D004151 ORTHO05D004775 2.7e-45 186.0 145 80.7
BcaB01g05179 Brassica carinata HOM05D004151 ORTHO05D004775 3.5e-45 185.7 154 76.6
C03p10140 Brassica napus HOM05D004151 ORTHO05D004775 3.5e-45 185.7 154 76.6
BraA03t10192Z Brassica rapa HOM05D004151 ORTHO05D004775 3.5e-45 185.7 154 76.6
ECA233G5487 Erigeron canadensis HOM05D004151 ORTHO05D004775 4.6e-45 185.3 133 72.2
A01p41270 Brassica napus HOM05D004151 ORTHO05D004775 6.0e-45 184.9 177 67.2
BNapus_Darmor_BZH_scaffold_78p00440 Brassica napus HOM05D004151 ORTHO05D004775 6.0e-45 184.9 177 67.2
BcaNung05743 Brassica carinata HOM05D004151 ORTHO05D004775 7.9e-45 184.5 178 68.0
Peaxi162Scf00076g01048 Petunia axillaris HOM05D004151 ORTHO05D004775 1.0e-44 184.1 146 75.3
Carub.0006s1646 Capsella rubella HOM05D004151 ORTHO05D004775 1.3e-44 183.7 147 79.6
Carub.0003s0316 Capsella rubella HOM05D004151 ORTHO05D004775 1.8e-44 183.3 197 70.6
A02p04770 Brassica napus HOM05D004151 ORTHO05D004775 3.0e-44 182.6 148 72.3
Zm00001eb114360 Zea mays HOM05D004151 ORTHO05D004775 3.9e-44 182.2 204 67.6
Mapoly0086s0024 Marchantia polymorpha HOM05D004151 ORTHO05D004775 6.7e-44 181.4 107 80.4
vmacro09141 Vaccinium macrocarpon HOM05D004151 ORTHO05D004775 8.7e-44 181.0 157 75.2
Pp3c5_28430 Physcomitrium patens HOM05D004151 ORTHO05D004775 1.5e-43 180.3 144 75.7
AT5G18180 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 1.9e-43 179.9 146 71.9
Pp3c25_15020 Physcomitrium patens HOM05D004151 ORTHO05D004775 5.7e-43 178.3 167 76.6
BcaB05g23300 Brassica carinata HOM05D004151 ORTHO05D004775 9.6e-43 177.6 149 74.5
Cpa.g.sc51.114 Carica papaya HOM05D004151 ORTHO05D004775 9.6e-43 177.6 90 92.2
BraA02t05436Z Brassica rapa HOM05D004151 ORTHO05D004775 1.6e-42 176.8 175 66.3
AL6G29380 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 2.1e-42 176.4 146 70.5
CBR_g48747 Chara braunii HOM05D004151 ORTHO05D004775 6.2e-42 174.9 107 76.6
Rhsim04G0087500 Rhododendron simsii HOM05D004151 ORTHO05D004775 1.1e-41 174.1 95 84.2
CAN.G960.49 Capsicum annuum HOM05D004151 ORTHO05D004775 3.1e-41 172.6 92 89.1
Nitab4.5_0004844g0050 Nicotiana tabacum HOM05D004151 ORTHO05D004775 6.9e-41 171.4 89 91.0
Nitab4.5_0002769g0090 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.5e-40 170.2 146 72.6
AagrBONN_evm.TU.Sc2ySwM_362.2901 Anthoceros agrestis HOM05D004151 ORTHO05D004775 4.5e-40 168.7 149 70.5
Cre13.g567850 Chlamydomonas reinhardtii HOM05D004151 ORTHO05D004775 3.8e-39 165.6 130 64.6
COL.COLO4_13598 Corchorus olitorius HOM05D004151 ORTHO05D004775 3.8e-39 165.6 148 69.6
Hund19236 Selenicereus undatus HOM05D004151 ORTHO05D004775 3.8e-39 165.6 115 70.4
Ca_08267_v3 Cicer arietinum L. HOM05D004151 ORTHO05D004775 1.9e-38 163.3 118 82.2
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 9.3e-38 161.0 80 95.0
MCO13G219 Micromonas commoda HOM05D004151 ORTHO05D004775 1.3e-34 150.6 94 71.3
SMO347G0554 Selaginella moellendorffii HOM05D004151 ORTHO05D004775 2.9e-31 139.4 169 65.1
BolC2t11912H Brassica oleracea HOM05D004151 ORTHO05D004775 8.5e-31 137.9 126 59.5
C09p58800 Brassica napus HOM05D004151 ORTHO05D004775 9.4e-30 134.4 80 75.0
unitig_744.g24550 Utricularia gibba HOM05D004151 ORTHO05D004775 3.3e-27 125.9 61 93.4
BraA10t42874Z Brassica rapa HOM05D004151 ORTHO05D004775 5.7e-27 125.2 102 63.7
PRCOL_00005119 Prasinoderma coloniale HOM05D005848 ORTHO05D007532 4.8e-26 122.1 76 67.1
Actinidia30553 Actinidia chinensis HOM05D004151 ORTHO05D004775 3.8e-23 112.5 107 78.5
C02p58510 Brassica napus HOM05D004151 ORTHO05D004775 1.9e-22 110.2 92 59.8
Oeu035726.1 Olea europaea HOM05D004151 ORTHO05D004775 2.3e-20 103.2 99 57.6
Haze_27090 Corylus avellana HOM05D000590 ORTHO05D004775 6.7e-20 101.7 114 45.6
Oeu035720.1 Olea europaea HOM05D004151 ORTHO05D004775 1.5e-19 100.5 99 56.6
HanXRQChr05g0143841 Helianthus annuus HOM05D004151 ORTHO05D004775 3.3e-19 99.4 132 50.8
Zm00001eb274230 Zea mays HOM05D004151 ORTHO05D004775 1.7e-18 97.1 49 85.7
Atru.chr6.7 Acer truncatum HOM05D004151 ORTHO05D004775 7.4e-11 71.6 45 73.3
Atru.chr10.1764 Acer truncatum HOM05D004151 ORTHO05D004775 9.7e-11 71.2 44 75.0
Atru.chr5.2304 Acer truncatum HOM05D004151 ORTHO05D004775 9.7e-11 71.2 44 75.0
BcaB08g36698 Brassica carinata HOM05D004151 ORTHO05D004775 9.7e-11 71.2 45 75.6
Atru.chr13.534 Acer truncatum HOM05D004151 ORTHO05D004775 8.2e-10 68.2 44 72.7
Atru.chr2.3197 Acer truncatum HOM05D004151 ORTHO05D004775 8.2e-10 68.2 44 72.7
Atru.chr4.2011 Acer truncatum HOM05D004151 ORTHO05D004775 8.2e-10 68.2 44 72.7
BolC9t58722H Brassica oleracea HOM05D004151 ORTHO05D004775 3.1e-09 66.2 39 76.9
ECA246G0128 Erigeron canadensis HOM05D001659 ORTHO05D001659 2.5e-06 56.6 35 71.4


User provided reference genes

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