Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041347.1 Olea europaea HOM05D005084 ORTHO05D006254 2.3e-185 652.1 342 100.0
Oeu049102.1 Olea europaea HOM05D005084 ORTHO05D006254 8.7e-100 367.9 457 54.3
Nitab4.5_0014729g0010 Nicotiana tabacum HOM05D005084 ORTHO05D006254 5.7e-75 285.4 463 44.3
Nitab4.5_0002589g0060 Nicotiana tabacum HOM05D005084 ORTHO05D006254 7.4e-75 285.0 463 44.7
CAN.G108.31 Capsicum annuum HOM05D005084 ORTHO05D006254 1.2e-72 277.7 462 43.5
Sopen03g003330 Solanum pennellii HOM05D005084 ORTHO05D006254 2.5e-70 270.0 462 43.5
Migut.F01049 Erythranthe guttata HOM05D005084 ORTHO05D006254 4.2e-70 269.2 459 43.6
Cc02_g01850 Coffea canephora HOM05D005084 ORTHO05D006254 6.1e-69 265.4 475 44.2
MSTRG.8499 Avicennia marina HOM05D005084 ORTHO05D006254 8.0e-69 265.0 461 44.0
Solyc03g007370.3 Solanum lycopersicum HOM05D005084 ORTHO05D006254 8.0e-69 265.0 462 43.1
PGSC0003DMG400009072 Solanum tuberosum HOM05D005084 ORTHO05D006254 2.3e-68 263.5 462 42.9
Oeu039181.1 Olea europaea HOM05D005084 ORTHO05D006254 6.7e-68 261.9 462 43.7
Peaxi162Scf00904g00132 Petunia axillaris HOM05D005084 ORTHO05D006254 6.7e-68 261.9 462 42.9
Dinv28334 Davidia involucrata HOM05D005084 ORTHO05D006254 4.1e-65 252.7 462 43.1
TAR374G0350 Trochodendron aralioides HOM05D005084 ORTHO05D006254 3.8e-63 246.1 462 41.3
TAR374G1373 Trochodendron aralioides HOM05D005084 ORTHO05D006254 8.5e-63 245.0 462 41.1
MSTRG.60 Avicennia marina HOM05D005084 ORTHO05D006254 1.1e-62 244.6 454 41.6
Hma1.2p1_1655F.1_g295960 Hydrangea macrophylla HOM05D005084 ORTHO05D006254 1.5e-62 244.2 461 41.4
Actinidia34200 Actinidia chinensis HOM05D005084 ORTHO05D006254 2.5e-62 243.4 462 41.8
Dinv35309 Davidia involucrata HOM05D005084 ORTHO05D006254 5.5e-62 242.3 483 40.2
SalBow2G2003 Salvia bowleyana HOM05D005084 ORTHO05D006254 1.2e-61 241.1 497 38.6
Prupe.2G307500 Prunus persica HOM05D005084 ORTHO05D006254 2.1e-61 240.4 464 39.7
CSS0047578 Camellia sinensis var. sinensis HOM05D005084 ORTHO05D006254 6.1e-61 238.8 462 41.3
CSS0033126 Camellia sinensis var. sinensis HOM05D005084 ORTHO05D006254 1.0e-60 238.0 462 41.3
GSVIVG01028717001 Vitis vinifera HOM05D005084 ORTHO05D006254 1.8e-60 237.3 464 40.7
Cfa016364 Carpinus fangiana HOM05D005084 ORTHO05D006254 5.2e-60 235.7 460 39.3
Duzib205G0306 Durio zibethinus HOM05D005084 ORTHO05D006254 1.7e-58 230.7 459 40.1
Eucgr.A02665 Eucalyptus grandis HOM05D005084 ORTHO05D006254 8.3e-58 228.4 391 41.4
Thecc.03G193300 Theobroma cacao HOM05D005084 ORTHO05D006254 8.3e-58 228.4 459 39.2
ClCG05G008730 Citrullus lanatus HOM05D005084 ORTHO05D006254 1.2e-56 224.6 454 39.2
DCAR_014530 Daucus carota HOM05D002314 ORTHO05D006254 1.2e-56 224.6 462 38.7
Atru.chr1.253 Acer truncatum HOM05D005084 ORTHO05D006254 2.7e-56 223.4 461 39.3
Gohir.A12G251600 Gossypium hirsutum HOM05D005084 ORTHO05D006254 2.7e-56 223.4 459 38.8
Gohir.D12G252400 Gossypium hirsutum HOM05D005084 ORTHO05D006254 3.5e-56 223.0 459 38.6
Gorai.008G270500 Gossypium raimondii HOM05D005084 ORTHO05D006254 3.5e-56 223.0 459 38.6
MD07G1285600 Malus domestica HOM05D005084 ORTHO05D006254 1.0e-55 221.5 462 38.1
FvH4_7g31060 Fragaria vesca HOM05D005084 ORTHO05D006254 1.7e-55 220.7 462 38.5
FAN06G2664 Fragaria x ananassa HOM05D005084 ORTHO05D006254 1.7e-55 220.7 465 38.1
FAN06G3876 Fragaria x ananassa HOM05D005084 ORTHO05D006254 1.7e-55 220.7 462 38.5
Medtr3g090900 Medicago truncatula HOM05D005084 ORTHO05D006254 5.0e-55 219.2 460 37.0
FAN03G2915 Fragaria x ananassa HOM05D005084 ORTHO05D006254 6.6e-55 218.8 461 38.0
Nn3g19059 Nelumbo nucifera HOM05D005084 ORTHO05D006254 1.1e-54 218.0 463 37.6
RcHm_v2.0_Chr1g0380131 Rosa chinensis HOM05D005084 ORTHO05D006254 1.1e-54 218.0 461 38.2
TAR375G1058 Trochodendron aralioides HOM05D005084 ORTHO05D006254 1.1e-54 218.0 462 38.3
FAN10G3897 Fragaria x ananassa HOM05D005084 ORTHO05D006254 1.5e-54 217.6 462 37.7
Ciclev10004760m.g Citrus clementina HOM05D005084 ORTHO05D006254 1.9e-54 217.2 462 38.3
QL09p010880 Quercus lobata HOM05D005084 ORTHO05D006254 2.5e-54 216.9 461 38.2
FAN10G0156 Fragaria x ananassa HOM05D005084 ORTHO05D006254 3.3e-54 216.5 462 37.4
Manes.06G157400 Manihot esculenta HOM05D005084 ORTHO05D006254 3.3e-54 216.5 451 38.8
Potri.012G031100 Populus trichocarpa HOM05D005084 ORTHO05D006254 1.2e-53 214.5 461 39.0
Sc19g0001140 Simmondsia chinensis HOM05D005084 ORTHO05D006254 3.6e-53 213.0 446 39.5
PGR042G2574 Punica granatum HOM05D005084 ORTHO05D006254 1.0e-52 211.5 457 37.4
CiPaw.06G007800 Carya illinoinensis HOM05D005084 ORTHO05D006254 1.8e-52 210.7 461 37.7
AUR62019340 Chenopodium quinoa HOM05D005084 ORTHO05D006254 1.8e-52 210.7 463 38.9
Cpa.g.sc3.54 Carica papaya HOM05D005084 ORTHO05D006254 2.3e-52 210.3 462 38.7
Lsat_1_v5_gn_4_164620 Lactuca sativa HOM05D005084 ORTHO05D006254 2.3e-52 210.3 460 38.9
CANSAT21G1247 Cannabis sativa HOM05D005084 ORTHO05D006254 5.2e-52 209.1 477 35.4
SGA_v2.0_scaffold192G40574 Striga asiatica HOM05D005084 ORTHO05D006254 8.9e-52 208.4 461 38.2
Migut.F00241 Erythranthe guttata HOM05D005084 ORTHO05D006254 1.2e-51 208.0 458 38.0
Lj1g0020917 Lotus japonicus HOM05D005084 ORTHO05D006254 2.6e-51 206.8 472 36.2
Aqoxy5G04167 Aquilegia oxysepala HOM05D005084 ORTHO05D006254 3.4e-51 206.5 458 37.6
Sp2g23190 Schrenkiella parvula HOM05D005084 ORTHO05D006254 4.4e-51 206.1 455 37.4
FAN01G1592 Fragaria x ananassa HOM05D005084 ORTHO05D006254 5.7e-51 205.7 482 36.1
Sed0009531 Sechium edule HOM05D005084 ORTHO05D006254 9.8e-51 204.9 452 37.2
arahy.Tifrunner.gnm1.ann1.77AFJV Arachis hypogaea HOM05D005084 ORTHO05D006254 1.3e-50 204.5 463 36.9
Phvul.001G061400 Phaseolus vulgaris HOM05D005084 ORTHO05D006254 3.7e-50 203.0 455 37.4
Glyma.13G041200 Glycine max HOM05D005084 ORTHO05D006254 4.9e-50 202.6 449 35.9
Phvul.009G137600 Phaseolus vulgaris HOM05D005084 ORTHO05D006254 4.9e-50 202.6 463 35.4
AUR62006149 Chenopodium quinoa HOM05D005084 ORTHO05D006254 6.3e-50 202.2 463 38.0
CsaV3_3G021990 Cucumis sativus L. HOM05D005084 ORTHO05D006254 1.1e-49 201.4 489 35.6
arahy.Tifrunner.gnm1.ann1.AT7H7M Arachis hypogaea HOM05D005084 ORTHO05D006254 1.4e-49 201.1 463 36.7
Lalb_Chr11g0066581 Lupinus albus HOM05D005084 ORTHO05D006254 1.4e-49 201.1 461 36.2
Sabra15G0016500 Salix brachista HOM05D005084 ORTHO05D006254 1.4e-49 201.1 461 36.7
Manes.14G018500 Manihot esculenta HOM05D005084 ORTHO05D006254 2.4e-49 200.3 451 36.1
Glyma.14G160600 Glycine max HOM05D005084 ORTHO05D006254 4.1e-49 199.5 456 36.6
TPR.G17303 Trifolium pratense HOM05D005084 ORTHO05D006254 4.1e-49 199.5 482 34.6
Ca_16675_v3 Cicer arietinum L. HOM05D005084 ORTHO05D006254 5.4e-49 199.1 460 36.1
Glyma.06G125700 Glycine max HOM05D005084 ORTHO05D006254 2.0e-48 197.2 452 35.6
Potri.015G022100 Populus trichocarpa HOM05D005084 ORTHO05D006254 2.7e-48 196.8 461 36.7
Lj3A910T45 Lonicera japonica HOM05D005084 ORTHO05D006254 3.5e-48 196.4 444 38.5
A09p06600 Brassica napus HOM05D005084 ORTHO05D006254 4.5e-48 196.1 455 35.2
COL.COLO4_35652 Corchorus olitorius HOM05D005084 ORTHO05D006254 5.9e-48 195.7 464 37.3
BolC9t53651H Brassica oleracea HOM05D005084 ORTHO05D006254 1.0e-47 194.9 451 35.0
EL10Ac3g05344 Beta vulgaris HOM05D005084 ORTHO05D006254 1.3e-47 194.5 468 35.3
Glyma.04G238200 Glycine max HOM05D005084 ORTHO05D006254 1.3e-47 194.5 454 35.2
BcaC04g23525 Brassica carinata HOM05D005084 ORTHO05D006254 2.3e-47 193.7 454 35.2
TWI14G0873 Tripterygium wilfordii HOM05D005084 ORTHO05D006254 2.3e-47 193.7 462 35.7
VMungo1309G1129 Vigna mungo HOM05D005084 ORTHO05D006254 2.3e-47 193.7 463 34.3
Haze_00115 Corylus avellana HOM05D005084 ORTHO05D006254 3.8e-47 193.0 402 37.6
TWI39G0830 Tripterygium wilfordii HOM05D005084 ORTHO05D006254 5.0e-47 192.6 459 35.9
VMungo0647G2005 Vigna mungo HOM05D005084 ORTHO05D006254 6.6e-47 192.2 455 34.9
Rhsim03G0198900 Rhododendron simsii HOM05D005084 ORTHO05D006254 1.9e-46 190.7 458 34.9
BraA09t36307Z Brassica rapa HOM05D005084 ORTHO05D006254 4.3e-46 189.5 455 34.7
CARHR189460 Cardamine hirsuta HOM05D005084 ORTHO05D006254 4.3e-46 189.5 462 35.1
THA.LOC104801874 Tarenaya hassleriana HOM05D005084 ORTHO05D006254 1.6e-45 187.6 446 36.8
vmacro06574 Vaccinium macrocarpon HOM05D005084 ORTHO05D006254 1.6e-45 187.6 462 35.5
Thhalv10004166m.g Eutrema salsugineum HOM05D005084 ORTHO05D006254 2.8e-45 186.8 456 34.6
AL6G35480 Arabidopsis lyrata HOM05D005084 ORTHO05D006254 1.4e-44 184.5 459 33.8
C09p07370 Brassica napus HOM05D005084 ORTHO05D006254 1.8e-44 184.1 451 34.4
Aa31LG11G3390 Aethionema arabicum HOM05D005084 ORTHO05D006254 4.0e-44 183.0 464 34.1
Sabra12G0020700 Salix brachista HOM05D005084 ORTHO05D006254 5.2e-44 182.6 498 34.5
Carub.0006s2185 Capsella rubella HOM05D005084 ORTHO05D006254 1.3e-42 177.9 463 34.3
BcaNung01816 Brassica carinata HOM05D005084 ORTHO05D006254 1.7e-42 177.6 455 33.6
HanXRQChr07g0206551 Helianthus annuus HOM05D005084 ORTHO05D006254 2.9e-42 176.8 454 36.1
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 3.7e-42 176.4 465 35.9
AT5G24120 Arabidopsis thaliana HOM05D005084 ORTHO05D006254 6.4e-42 175.6 459 33.3
C07p43590 Brassica napus HOM05D005084 ORTHO05D006254 1.9e-41 174.1 454 32.8
BolC7t44886H Brassica oleracea HOM05D005084 ORTHO05D006254 1.9e-41 174.1 454 32.8
PSO384G3210 Papaver somniferum HOM05D005084 ORTHO05D006254 1.9e-41 174.1 463 34.6
BraA06t26420Z Brassica rapa HOM05D005084 ORTHO05D006254 3.2e-41 173.3 452 32.3
TWI23G1148 Tripterygium wilfordii HOM05D005084 ORTHO05D006254 4.1e-41 172.9 459 35.3
A06p34960 Brassica napus HOM05D005084 ORTHO05D006254 7.0e-41 172.2 452 32.1
Hund04833 Selenicereus undatus HOM05D005084 ORTHO05D006254 9.2e-41 171.8 459 33.6
unitig_37.g12544 Utricularia gibba HOM05D005084 ORTHO05D006254 7.8e-40 168.7 463 32.8
CDE09G0664 Ceratophyllum demersum HOM05D005084 ORTHO05D006254 1.7e-39 167.5 459 34.4
unitig_46.g18814 Utricularia gibba HOM05D005084 ORTHO05D006254 3.0e-39 166.8 458 33.6
PSO135G0769 Papaver somniferum HOM05D005084 ORTHO05D006254 3.9e-39 166.4 463 33.3
Ah.13g069910 Amaranthus hybridus HOM05D005084 ORTHO05D006254 2.1e-37 160.6 427 34.9
Hund11680 Selenicereus undatus HOM05D005084 ORTHO05D006254 8.0e-37 158.7 486 32.1
BcaNung01211 Brassica carinata HOM05D005084 ORTHO05D006254 1.7e-34 151.0 532 29.1
Haze_00097 Corylus avellana HOM05D005084 ORTHO05D006254 1.2e-29 134.8 375 34.4
CDE08G1386 Ceratophyllum demersum HOM05D005084 ORTHO05D006254 8.1e-29 132.1 453 29.1
MELO3C026931.2 Cucumis melo HOM05D005084 ORTHO05D006254 1.8e-28 131.0 107 66.4
MBI07_g26938_MAGBIO Magnolia biondii HOM05D005084 ORTHO05D006254 1.5e-27 127.9 285 34.7
MBI07_g14395_MAGBIO Magnolia biondii HOM05D005084 ORTHO05D006254 1.9e-25 120.9 260 39.2
BcaB04g19836 Brassica carinata HOM05D005084 ORTHO05D006254 2.8e-21 107.1 252 36.9
Psat5g079640 Pisum sativum HOM05D005084 ORTHO05D006254 2.8e-21 107.1 259 35.1
HanXRQChr14g0462871 Helianthus annuus HOM05D005084 ORTHO05D006254 2.0e-19 100.9 103 58.3
CDE02G3800 Ceratophyllum demersum HOM05D000100 ORTHO05D000052 2.6e-19 100.5 135 42.2
Zm00001eb297590 Zea mays HOM05D005084 ORTHO05D006254 1.1e-14 85.1 108 45.4
Os05g0586600 Oryza sativa ssp. japonica HOM05D005084 ORTHO05D006254 1.9e-14 84.3 359 25.1
HPP92_005516 Vanilla planifolia HOM05D005084 ORTHO05D006254 1.9e-14 84.3 92 52.2
ATR0589G115 Amborella trichopoda HOM05D005084 ORTHO05D006254 2.5e-14 84.0 67 56.7
MD01G1215500 Malus domestica HOM05D005084 ORTHO05D006254 1.6e-13 81.3 49 71.4


User provided reference genes

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