Gene: Rhsim03G0198900

General Information

Structural Information

  • Species Rhododendron simsii
  • Gene Identifier Rhsim03G0198900
  • Transcript Identifier Rhsim03G0198900.1
  • Gene Type Coding gene
  • Location chr03 : 32214925-32224690 : positive

Gene Family Information

  • ID HOM05D005084
  • #Genes/#Species 147/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Rhsim03G0198900.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071483
ISO
PLAZA Integrative Orthologycellular response to blue light AT5G24120
GO:0010114
ISO
PLAZA Integrative Orthologyresponse to red light AT5G24120
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G24120
GO:0010218
ISO
PLAZA Integrative Orthologyresponse to far red light AT5G24120
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly AT5G24120
GO:0071472
ISO
PLAZA Integrative Orthologycellular response to salt stress AT5G24120
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G24120
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT5G24120
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT5G24120
GO:2001141
ISO
PLAZA Integrative Orthologyregulation of RNA biosynthetic process AT5G24120
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006352
IEA
InterProDNA-templated transcription, initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003899
ISO
PLAZA Integrative OrthologyDNA-directed 5'-3' RNA polymerase activity Os05g0586600
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G24120
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0016987
ISO
PLAZA Integrative Orthologysigma factor activity AT5G24120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G24120
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G24120
GO:0009536
ISO
PLAZA Integrative Orthologyplastid Os05g0586600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007627 RNA polymerase sigma-70 region 2
IPR013324 RNA polymerase sigma factor, region 3/4-like
IPR007624 RNA polymerase sigma-70 region 3
IPR013325 RNA polymerase sigma factor, region 2
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
15.6.2.1 RNA biosynthesis.organelle machinery.transcriptional regulation.basal transcription factor (Sigma)