Gene: DCAR_014530
General Information
Structural Information
- Species Daucus carota
- Gene Identifier DCAR_014530
- Transcript Identifier DCAR_014530
- Gene Type Coding gene
- Location DCARv2_Chr4 : 21158731-21167491 : negative
Gene Family Information
- ID HOM05D002314
- #Genes/#Species 292/98
- Phylogenetic origin
- ID ORTHO05D006254
- #Genes/#Species 145/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pacid 36079692
- id DCAR_014530.v1.0
- uniprot A0A165XF51
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009637 | ISO | PLAZA Integrative Orthology | response to blue light | AT5G24120 |
| GO:0010114 | ISO | PLAZA Integrative Orthology | response to red light | AT5G24120 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT5G24120 |
| GO:0010218 | ISO | PLAZA Integrative Orthology | response to far red light | AT5G24120 |
| GO:0010207 | ISO | PLAZA Integrative Orthology | photosystem II assembly | AT5G24120 |
| GO:0071472 | ISO | PLAZA Integrative Orthology | cellular response to salt stress | AT5G24120 |
| GO:0071483 | ISO | PLAZA Integrative Orthology | cellular response to blue light | AT5G24120 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT5G24120 |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT5G24120 |
| GO:2001141 | ISO | PLAZA Integrative Orthology | regulation of RNA biosynthetic process | AT5G24120 |
| GO:0006352 | IEA | GOA Database | DNA-templated transcription, initiation | |
| GO:0006352 | IEA | InterPro | DNA-templated transcription, initiation | |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:2000142 | IEA | GOA Database | regulation of DNA-templated transcription, initiation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003899 | ISO | PLAZA Integrative Orthology | DNA-directed 5'-3' RNA polymerase activity | Os05g0586600 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G24120 |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0016987 | IEA | GOA Database | sigma factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G24120 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G24120 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | Os05g0586600 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR018108 | Mitochondrial substrate/solute carrier |
| IPR023395 | Mitochondrial carrier domain superfamily |
| IPR013324 | RNA polymerase sigma factor, region 3/4-like |
| IPR007627 | RNA polymerase sigma-70 region 2 |
| IPR000943 | RNA polymerase sigma-70 |
| IPR007624 | RNA polymerase sigma-70 region 3 |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR014284 | RNA polymerase sigma-70 like domain |
| IPR007630 | RNA polymerase sigma-70 region 4 |
| IPR013325 | RNA polymerase sigma factor, region 2 |