Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040383.1 Olea europaea HOM05D003678 ORTHO05D004340 1.4e-229 799.3 410 100.0
MSTRG.25776 Avicennia marina HOM05D003678 ORTHO05D004340 3.5e-180 635.2 412 77.7
SalBow4G1160 Salvia bowleyana HOM05D003678 ORTHO05D004340 1.1e-176 623.6 412 76.0
Cc08_g06430 Coffea canephora HOM05D003678 ORTHO05D004340 6.4e-174 614.4 414 73.9
Dinv18146 Davidia involucrata HOM05D003678 ORTHO05D004340 1.4e-173 613.2 412 75.2
Dinv03491 Davidia involucrata HOM05D003678 ORTHO05D004340 7.8e-172 607.4 413 75.1
CSS0027905 Camellia sinensis var. sinensis HOM05D003678 ORTHO05D004340 1.7e-171 606.3 413 73.8
SGA_v2.0_scaffold193G40661 Striga asiatica HOM05D003678 ORTHO05D004340 1.7e-171 606.3 442 71.5
Haze_21723 Corylus avellana HOM05D003678 ORTHO05D004340 5.1e-171 604.7 415 73.3
TAR626G0897 Trochodendron aralioides HOM05D003678 ORTHO05D004340 5.1e-171 604.7 415 73.3
Prupe.1G461000 Prunus persica HOM05D003678 ORTHO05D004340 6.6e-171 604.4 414 72.7
Thecc.09G006300 Theobroma cacao HOM05D003678 ORTHO05D004340 2.5e-170 602.4 412 73.5
Cfa013262 Carpinus fangiana HOM05D003678 ORTHO05D004340 3.3e-170 602.1 415 73.0
Duzib168G2376 Durio zibethinus HOM05D003678 ORTHO05D004340 3.3e-170 602.1 412 73.8
Nitab4.5_0005481g0010 Nicotiana tabacum HOM05D003678 ORTHO05D004340 2.8e-169 599.0 417 72.4
QL12p024946 Quercus lobata HOM05D003678 ORTHO05D004340 2.8e-169 599.0 411 72.5
vmacro05102 Vaccinium macrocarpon HOM05D003678 ORTHO05D004340 3.6e-169 598.6 412 73.8
TAR626G0756 Trochodendron aralioides HOM05D003678 ORTHO05D004340 6.2e-169 597.8 415 72.8
Manes.03G003200 Manihot esculenta HOM05D003678 ORTHO05D004340 2.6e-167 592.4 413 73.1
Hma1.2p1_0379F.1_g139790 Hydrangea macrophylla HOM05D003678 ORTHO05D004340 7.6e-167 590.9 413 72.2
Hma1.2p1_0891F.1_g233175 Hydrangea macrophylla HOM05D003678 ORTHO05D004340 7.6e-167 590.9 413 72.2
Solyc12g096450.2 Solanum lycopersicum HOM05D003678 ORTHO05D004340 9.9e-167 590.5 416 71.2
Peaxi162Scf00459g00837 Petunia axillaris HOM05D003678 ORTHO05D004340 1.3e-166 590.1 412 71.8
Eucgr.C04005 Eucalyptus grandis HOM05D003678 ORTHO05D004340 1.7e-166 589.7 415 71.6
Nitab4.5_0001110g0180 Nicotiana tabacum HOM05D003678 ORTHO05D004340 2.9e-166 589.0 423 70.9
Sopen12g032280 Solanum pennellii HOM05D003678 ORTHO05D004340 2.9e-166 589.0 416 70.9
MD15G1108800 Malus domestica HOM05D003678 ORTHO05D004340 1.4e-165 586.6 414 71.0
TAR383G0188 Trochodendron aralioides HOM05D003678 ORTHO05D004340 1.2e-164 583.6 414 71.0
Migut.A00439 Erythranthe guttata HOM05D003678 ORTHO05D004340 1.6e-164 583.2 413 70.9
PGSC0003DMG400029367 Solanum tuberosum HOM05D003678 ORTHO05D004340 2.1e-164 582.8 415 70.8
Gohir.D05G067600 Gossypium hirsutum HOM05D003678 ORTHO05D004340 3.5e-164 582.0 412 70.4
CiPaw.08G019100 Carya illinoinensis HOM05D003678 ORTHO05D004340 7.9e-164 580.9 412 70.9
Gorai.009G068400 Gossypium raimondii HOM05D003678 ORTHO05D004340 7.9e-164 580.9 412 70.6
TAR383G0531 Trochodendron aralioides HOM05D003678 ORTHO05D004340 3.0e-163 578.9 414 70.5
Hund03284 Selenicereus undatus HOM05D003678 ORTHO05D004340 5.1e-163 578.2 414 68.8
Gohir.A05G065000 Gossypium hirsutum HOM05D003678 ORTHO05D004340 6.7e-163 577.8 412 70.4
arahy.Tifrunner.gnm1.ann1.DFD6U9 Arachis hypogaea HOM05D003678 ORTHO05D004340 1.5e-162 576.6 413 70.0
Ca_12869_v3 Cicer arietinum L. HOM05D003678 ORTHO05D004340 7.4e-162 574.3 415 70.4
arahy.Tifrunner.gnm1.ann1.P9WJGS Arachis hypogaea HOM05D003678 ORTHO05D004340 3.7e-161 572.0 413 69.5
CAN.G566.61 Capsicum annuum HOM05D003678 ORTHO05D004340 3.7e-161 572.0 415 69.6
Ciclev10008476m.g Citrus clementina HOM05D003678 ORTHO05D004340 4.8e-161 571.6 414 70.3
TWI63G1033 Tripterygium wilfordii HOM05D003678 ORTHO05D004340 1.1e-160 570.5 413 71.2
AUR62009050 Chenopodium quinoa HOM05D003678 ORTHO05D004340 1.8e-160 569.7 413 67.1
Glyma.17G200200 Glycine max HOM05D003678 ORTHO05D004340 1.8e-160 569.7 413 69.7
CANSAT25G1292 Cannabis sativa HOM05D003678 ORTHO05D004340 4.0e-160 568.5 417 69.3
Atru.chr7.2631 Acer truncatum HOM05D003678 ORTHO05D004340 5.3e-160 568.2 414 69.8
AUR62020613 Chenopodium quinoa HOM05D003678 ORTHO05D004340 9.0e-160 567.4 413 66.8
Glyma.11G172610 Glycine max HOM05D003678 ORTHO05D004340 2.0e-159 566.2 413 69.2
Lj5g0015114 Lotus japonicus HOM05D003678 ORTHO05D004340 2.6e-159 565.8 413 69.5
Glyma.17G189600 Glycine max HOM05D003678 ORTHO05D004340 3.4e-159 565.5 413 69.0
Lalb_Chr14g0362261 Lupinus albus HOM05D003678 ORTHO05D004340 3.4e-159 565.5 420 68.6
Rhsim07G0170500 Rhododendron simsii HOM05D003678 ORTHO05D004340 3.4e-159 565.5 412 69.9
Potri.006G275300 Populus trichocarpa HOM05D003678 ORTHO05D004340 4.5e-159 565.1 413 70.5
Ah.06g192800 Amaranthus hybridus HOM05D003678 ORTHO05D004340 5.8e-159 564.7 414 67.1
RcHm_v2.0_Chr6g0304871 Rosa chinensis HOM05D003678 ORTHO05D004340 5.8e-159 564.7 417 68.1
Glyma.11G172819 Glycine max HOM05D003678 ORTHO05D004340 7.6e-159 564.3 413 69.0
Cc08_g06510 Coffea canephora HOM05D003678 ORTHO05D004340 4.9e-158 561.6 380 73.2
VMungo0647G0546 Vigna mungo HOM05D003678 ORTHO05D004340 4.9e-158 561.6 415 68.9
Aqoxy7G03011 Aquilegia oxysepala HOM05D003678 ORTHO05D004340 1.4e-157 560.1 417 69.1
DCAR_000669 Daucus carota HOM05D003678 ORTHO05D004340 7.1e-157 557.8 413 69.0
CANSAT11G2609 Cannabis sativa HOM05D003678 ORTHO05D004340 2.7e-156 555.8 416 67.8
MBI16_g31785_MAGBIO Magnolia biondii HOM05D003678 ORTHO05D004340 2.7e-156 555.8 415 68.2
Sabra06G0213100 Salix brachista HOM05D003678 ORTHO05D004340 2.7e-156 555.8 413 69.5
FAN20G0096 Fragaria x ananassa HOM05D003678 ORTHO05D004340 4.6e-156 555.1 416 67.1
PGR044G2213 Punica granatum HOM05D003678 ORTHO05D004340 6.0e-156 554.7 418 66.5
Cpa.g.sc23.4 Carica papaya HOM05D003678 ORTHO05D004340 2.3e-155 552.7 412 68.0
FvH4_2g36910 Fragaria vesca HOM05D003678 ORTHO05D004340 7.4e-154 547.7 416 66.6
Phvul.001G058800 Phaseolus vulgaris HOM05D003678 ORTHO05D004340 7.4e-154 547.7 417 68.3
Lalb_Chr24g0402471 Lupinus albus HOM05D003678 ORTHO05D004340 4.8e-153 545.0 428 66.4
FAN15G2333 Fragaria x ananassa HOM05D003678 ORTHO05D004340 6.2e-153 544.7 413 68.5
Medtr1g009770 Medicago truncatula HOM05D003678 ORTHO05D004340 1.4e-152 543.5 414 65.7
Actinidia03577 Actinidia chinensis HOM05D003678 ORTHO05D004340 5.3e-152 541.6 411 69.1
Gohir.D07G001800 Gossypium hirsutum HOM05D003678 ORTHO05D004340 1.2e-151 540.4 412 67.5
Gorai.001G001500 Gossypium raimondii HOM05D003678 ORTHO05D004340 1.5e-151 540.0 412 67.5
Psat6g032480 Pisum sativum HOM05D003678 ORTHO05D004340 3.4e-151 538.9 413 69.0
Peaxi162Scf00045g01736 Petunia axillaris HOM05D003678 ORTHO05D004340 1.0e-150 537.3 417 66.2
EL10Ac2g03738 Beta vulgaris HOM05D003678 ORTHO05D004340 1.3e-150 537.0 452 62.8
GSVIVG01035534001 Vitis vinifera HOM05D003678 ORTHO05D004340 2.9e-150 535.8 412 68.7
Gohir.A07G001400 Gossypium hirsutum HOM05D003678 ORTHO05D004340 3.2e-149 532.3 412 66.3
Nitab4.5_0000555g0240 Nicotiana tabacum HOM05D003678 ORTHO05D004340 5.5e-149 531.6 417 65.7
Potri.018G006300 Populus trichocarpa HOM05D003678 ORTHO05D004340 5.5e-149 531.6 413 66.8
COL.COLO4_19043 Corchorus olitorius HOM05D003678 ORTHO05D004340 1.2e-148 530.4 380 71.8
FAN27G1333 Fragaria x ananassa HOM05D003678 ORTHO05D004340 4.6e-148 528.5 412 65.3
HanXRQChr16g0513211 Helianthus annuus HOM05D003678 ORTHO05D004340 1.3e-147 526.9 413 64.6
Lsat_1_v5_gn_6_15381 Lactuca sativa HOM05D003678 ORTHO05D004340 5.1e-147 525.0 411 63.7
PSO170G4284 Papaver somniferum HOM05D003678 ORTHO05D004340 1.1e-146 523.9 416 64.7
unitig_32.g11644 Utricularia gibba HOM05D003678 ORTHO05D004340 2.5e-146 522.7 415 66.0
TPR.G12018 Trifolium pratense HOM05D003678 ORTHO05D004340 1.3e-145 520.4 446 60.1
ECA233G4849 Erigeron canadensis HOM05D003678 ORTHO05D004340 2.8e-145 519.2 408 63.0
Thhalv10025366m.g Eutrema salsugineum HOM05D003678 ORTHO05D004340 3.1e-144 515.8 414 64.0
Zm00001eb226230 Zea mays HOM05D003678 ORTHO05D004340 4.1e-144 515.4 413 66.6
CDE02G2639 Ceratophyllum demersum HOM05D003678 ORTHO05D004340 4.5e-143 511.9 415 61.7
Os06g0693500 Oryza sativa ssp. japonica HOM05D003678 ORTHO05D004340 1.3e-142 510.4 412 63.8
Carub.0007s0914 Capsella rubella HOM05D003678 ORTHO05D004340 1.7e-142 510.0 413 63.4
PSO063G6534 Papaver somniferum HOM05D003678 ORTHO05D004340 9.4e-141 504.2 415 62.9
THA.LOC104803597 Tarenaya hassleriana HOM05D003678 ORTHO05D004340 9.4e-141 504.2 414 64.5
AL7G20640 Arabidopsis lyrata HOM05D003678 ORTHO05D004340 1.2e-140 503.8 414 62.3
CARHR239300 Cardamine hirsuta HOM05D003678 ORTHO05D004340 1.6e-140 503.4 413 62.5
Sed0004467 Sechium edule HOM05D003678 ORTHO05D004340 1.6e-140 503.4 413 63.4
BcaNung04590 Brassica carinata HOM05D003678 ORTHO05D004340 3.6e-140 502.3 413 62.0
HanXRQChr12g0384061 Helianthus annuus HOM05D003678 ORTHO05D004340 7.9e-140 501.1 414 63.3
BcaC09g51921 Brassica carinata HOM05D003678 ORTHO05D004340 5.1e-139 498.4 414 60.9
C01p07630 Brassica napus HOM05D003678 ORTHO05D004340 5.1e-139 498.4 414 60.9
MELO3C003636.2 Cucumis melo HOM05D003678 ORTHO05D004340 5.1e-139 498.4 413 64.2
CsaV3_3G047000 Cucumis sativus L. HOM05D003678 ORTHO05D004340 2.0e-138 496.5 413 63.4
Aa31LG2G18930 Aethionema arabicum HOM05D003678 ORTHO05D004340 4.3e-138 495.4 413 62.0
Sed0010708 Sechium edule HOM05D003678 ORTHO05D004340 4.3e-138 495.4 415 63.9
BolC1t00743H Brassica oleracea HOM05D003678 ORTHO05D004340 1.3e-137 493.8 415 60.7
Sp7g29280 Schrenkiella parvula HOM05D003678 ORTHO05D004340 1.3e-137 493.8 412 62.6
CiPaw.07G213700 Carya illinoinensis HOM05D003678 ORTHO05D004340 4.8e-137 491.9 374 67.6
HPP92_010767 Vanilla planifolia HOM05D003678 ORTHO05D004340 1.1e-136 490.7 419 60.9
A01p06860 Brassica napus HOM05D003678 ORTHO05D004340 4.1e-136 488.8 413 59.8
Thhalv10000189m.g Eutrema salsugineum HOM05D003678 ORTHO05D004340 9.1e-136 487.6 427 60.4
BraA01t00637Z Brassica rapa HOM05D003678 ORTHO05D004340 2.0e-135 486.5 414 59.7
AT2G24500 Arabidopsis thaliana HOM05D003678 ORTHO05D004340 2.2e-134 483.0 411 59.4
Lsat_1_v5_gn_3_27981 Lactuca sativa HOM05D003678 ORTHO05D004340 9.4e-133 477.6 427 61.4
Carub.0004s0384 Capsella rubella HOM05D003678 ORTHO05D004340 2.1e-132 476.5 414 59.7
Sp4g03510 Schrenkiella parvula HOM05D003678 ORTHO05D004340 1.0e-131 474.2 420 59.3
BcaB06g27975 Brassica carinata HOM05D003678 ORTHO05D004340 8.8e-131 471.1 414 58.9
SEGI_16726 Sequoiadendron giganteum HOM05D003678 ORTHO05D004340 1.5e-130 470.3 414 57.5
Nn8g40427 Nelumbo nucifera HOM05D003678 ORTHO05D004340 2.6e-130 469.5 330 70.9
AT4G31420 Arabidopsis thaliana HOM05D003678 ORTHO05D004340 3.3e-130 469.2 414 58.7
Aa31LG7G11470 Aethionema arabicum HOM05D003678 ORTHO05D004340 9.7e-130 467.6 419 60.9
Manes.16G136200 Manihot esculenta HOM05D003678 ORTHO05D004340 1.8e-128 463.4 422 59.7
AL4G14980 Arabidopsis lyrata HOM05D003678 ORTHO05D004340 2.4e-128 463.0 411 57.9
CARHR117530 Cardamine hirsuta HOM05D003678 ORTHO05D004340 2.2e-126 456.4 411 58.6
BcaC02g08448 Brassica carinata HOM05D003678 ORTHO05D004340 1.1e-125 454.1 416 57.7
BolC4t26963H Brassica oleracea HOM05D003678 ORTHO05D004340 1.1e-125 454.1 416 57.7
BraA09t41018Z Brassica rapa HOM05D003678 ORTHO05D004340 2.5e-125 453.0 417 58.5
C04p54110 Brassica napus HOM05D003678 ORTHO05D004340 1.2e-124 450.7 416 57.5
ATR0580G292 Amborella trichopoda HOM05D003678 ORTHO05D004340 4.7e-124 448.7 413 56.7
Lj7A752T54 Lonicera japonica HOM05D003678 ORTHO05D004340 1.8e-123 446.8 412 61.9
A04p18800 Brassica napus HOM05D003678 ORTHO05D004340 2.0e-122 443.4 422 56.4
CAN.G673.15 Capsicum annuum HOM05D003678 ORTHO05D004340 2.0e-122 443.4 362 63.5
BraA04t17489Z Brassica rapa HOM05D003678 ORTHO05D004340 5.7e-122 441.8 415 57.3
HanXRQChr16g0504351 Helianthus annuus HOM05D003678 ORTHO05D004340 1.1e-120 437.6 363 61.2
PGSC0003DMG401026315 Solanum tuberosum HOM05D003678 ORTHO05D004340 1.8e-120 436.8 359 62.7
A09p56240 Brassica napus HOM05D003678 ORTHO05D004340 3.1e-120 436.0 441 55.1
Sc09g0008090 Simmondsia chinensis HOM05D003678 ORTHO05D004340 2.3e-115 419.9 289 72.0
ClCG05G017500 Citrullus lanatus HOM05D003678 ORTHO05D004340 4.0e-115 419.1 355 62.3
Sopen08g002420 Solanum pennellii HOM05D003678 ORTHO05D004340 5.4e-112 408.7 354 58.2
MD08G1131000 Malus domestica HOM05D003678 ORTHO05D004340 2.0e-111 406.8 284 69.4
Solyc08g006470.4 Solanum lycopersicum HOM05D003678 ORTHO05D004340 1.3e-110 404.1 351 58.4
Medtr1g047010 Medicago truncatula HOM05D003678 ORTHO05D004340 3.0e-107 392.9 371 57.1
Oeu018570.1 Olea europaea HOM05D003678 ORTHO05D004340 2.2e-105 386.7 321 62.0
BcaC07g40924 Brassica carinata HOM05D003678 ORTHO05D004340 1.1e-104 384.4 408 53.9
BolC8t51492H Brassica oleracea HOM05D003678 ORTHO05D004340 1.2e-103 380.9 439 49.9
TAR383G1077 Trochodendron aralioides HOM05D003678 ORTHO05D004340 9.5e-101 371.3 377 55.7
Nitab4.5_0004131g0030 Nicotiana tabacum HOM05D003678 ORTHO05D004340 1.0e-99 367.9 401 52.4
Mapoly0085s0044 Marchantia polymorpha HOM05D003678 ORTHO05D004340 2.6e-98 363.2 415 51.1
CDE05G1087 Ceratophyllum demersum HOM05D003678 ORTHO05D004340 3.7e-97 359.4 374 51.3
C08p39190 Brassica napus HOM05D003678 ORTHO05D004340 2.2e-89 333.6 329 54.1
SMO143G0266 Selaginella moellendorffii HOM05D003678 ORTHO05D004340 3.6e-84 316.2 415 44.6
Pp3c2_4670 Physcomitrium patens HOM05D003678 ORTHO05D004340 2.0e-82 310.5 420 43.3
CBR_g30359 Chara braunii HOM05D003678 ORTHO05D004340 4.4e-74 282.7 467 40.9
CDE05G3053 Ceratophyllum demersum HOM05D003678 ORTHO05D004340 1.7e-65 254.2 268 51.5
ECA246G1371 Erigeron canadensis HOM05D000763 ORTHO05D004340 2.4e-64 250.4 321 46.4
BcaC07g37410 Brassica carinata HOM05D003678 ORTHO05D004340 3.5e-63 246.5 264 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5550 Anthoceros agrestis HOM05D003678 ORTHO05D004340 1.1e-61 241.5 411 39.4
Pp3c14_26000 Physcomitrium patens HOM05D003678 ORTHO05D004340 2.2e-49 200.7 234 46.6
BolC1t05292H Brassica oleracea HOM05D003678 ORTHO05D004340 2.9e-41 173.7 226 45.6
BolC8t47735H Brassica oleracea HOM05D003678 ORTHO05D004340 3.0e-38 163.7 242 40.9
C03p31060 Brassica napus HOM05D003678 ORTHO05D004340 5.1e-38 162.9 239 41.8
CAN.G4.3 Capsicum annuum HOM05D003678 ORTHO05D004340 1.8e-35 154.5 105 66.7
BcaB03g16788 Brassica carinata HOM05D003678 ORTHO05D004340 6.3e-28 129.4 132 50.8
Actinidia14145 Actinidia chinensis HOM05D003678 ORTHO05D004340 1.2e-26 125.2 111 61.3
BcaC05g27745 Brassica carinata HOM05D003678 ORTHO05D004340 4.5e-26 123.2 99 60.6
C05p37300 Brassica napus HOM05D003678 ORTHO05D004340 4.5e-26 123.2 99 60.6
C08p08900 Brassica napus HOM05D003678 ORTHO05D004340 1.0e-25 122.1 99 59.6
Cfa025296 Carpinus fangiana HOM05D003678 ORTHO05D004340 3.8e-25 120.2 322 28.9
Medtr5g061270 Medicago truncatula HOM05D003678 ORTHO05D004340 3.8e-25 120.2 142 49.3
Cre17.g716400 Chlamydomonas reinhardtii HOM05D003678 ORTHO05D004340 1.8e-22 111.3 478 27.0
ECA246G4346 Erigeron canadensis HOM05D000087 ORTHO05D009473 2.3e-22 110.9 98 64.3
PRCOL_00002050 Prasinoderma coloniale HOM05D003678 ORTHO05D004340 2.3e-22 110.9 434 27.2
BcaC06g31298 Brassica carinata HOM05D003678 ORTHO05D004340 6.7e-22 109.4 66 71.2
BcaC01g05020 Brassica carinata HOM05D003678 ORTHO05D004340 1.7e-20 104.8 137 44.5
ECA246G0440 Erigeron canadensis HOM05D003678 ORTHO05D004340 3.1e-19 100.5 70 64.3
A04p16990 Brassica napus HOM05D003678 ORTHO05D004340 3.4e-18 97.1 101 48.5
BcaC09g48198 Brassica carinata HOM05D003678 ORTHO05D004340 3.8e-17 93.6 88 54.5
BcaC09g48197 Brassica carinata HOM05D003678 ORTHO05D011193 1.6e-15 88.2 47 83.0
BcaC05g28588 Brassica carinata HOM05D015584 ORTHO05D016118 2.4e-11 74.3 40 77.5
Os06g0693600 Oryza sativa ssp. japonica HOM05D003678 ORTHO05D004340 2.0e-10 71.2 77 54.5
BcaC08g45872 Brassica carinata HOM05D005572 ORTHO05D032868 4.2e-08 63.5 31 90.3
C05p46930 Brassica napus HOM05D003678 ORTHO05D016118 4.2e-08 63.5 36 75.0
BolC5t33423H Brassica oleracea HOM05D003678 ORTHO05D016118 4.2e-08 63.5 36 75.0
ECA233G0490 Erigeron canadensis HOM05D003678 ORTHO05D004340 2.7e-07 60.8 84 40.5
SHI21127 Sapria himalayana HOM05D003678 ORTHO05D004340 6.1e-07 59.7 35 65.7
Pp3c17_19500 Physcomitrium patens HOM05D003678 ORTHO05D004340 1.0e-06 58.9 51 45.1


User provided reference genes

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